RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 RAB30Q15771 203 aa12.25□□□□□ -0.45
ERCC3-203ENST00000445889 CEACAM16Q2WEN9 425 aa12.25□□□□□ -0.45
ERCC3-203ENST00000445889 HIKESHIQ53FT3 197 aa12.25□□□□□ -0.45
ERCC3-203ENST00000445889 ODF3L1Q8IXM7 274 aa12.25□□□□□ -0.45
ERCC3-203ENST00000445889 SPSB1Q96BD6 273 aa12.25□□□□□ -0.45
ERCC3-203ENST00000445889 FAM86C1Q9NVL1 165 aa12.25□□□□□ -0.45
ERCC3-203ENST00000445889 TMED3Q9Y3Q3 217 aa12.25□□□□□ -0.45
ERCC3-203ENST00000445889 WSB1Q9Y6I7 421 aa12.25□□□□□ -0.45
ERCC3-203ENST00000445889 LOC400499M0QZD8 3231 aa12.25□□□□□ -0.45
ERCC3-203ENST00000445889 CACNA1EQ15878 2313 aa12.25□□□□□ -0.45
ERCC3-203ENST00000445889 PI4KAP42356 2102 aa12.25□□□□□ -0.45
ERCC3-203ENST00000445889 A0A096LPE4 126 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 A0A1W2PPZ6 126 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 CXCL13O43927 109 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 TRAPPC6AO75865 159 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 SRP19P09132 144 aaKnown RBP12.24□□□□□ -0.45
ERCC3-203ENST00000445889 FGF8P55075 233 aaPredicted RBP12.24□□□□□ -0.45
ERCC3-203ENST00000445889 ZNF266Q14584 549 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 LRTM2Q8N967 370 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 CADM4Q8NFZ8 388 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 ARHGAP21Q5T5U3 1957 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 IGHV3-64DA0A0J9YX35 117 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 HIST1H2BKO60814 126 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 PDCD6O75340 191 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 HIST1H2BJP06899 126 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 RFPL3SP0C7P2 107 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 LIFP15018 202 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 HIST1H2BOP23527 126 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 HIST1H2BBP33778 126 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 HIST1H2BDP58876 126 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 RPL23AP62750 156 aaKnown RBP12.24□□□□□ -0.45
ERCC3-203ENST00000445889 HIST1H2BCP62807 126 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 CNN3Q15417 329 aaKnown RBP12.24□□□□□ -0.45
ERCC3-203ENST00000445889 HIST2H2BEQ16778 126 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 MPV17LQ2QL34 196 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.24□□□□□ -0.45
ERCC3-203ENST00000445889 ZNF385CQ66K41 422 aaPredicted RBP12.24□□□□□ -0.45
ERCC3-203ENST00000445889 KMT5CQ86Y97 462 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 ZNF610Q8N9Z0 462 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 HIST1H2BHQ93079 126 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 ZNF488Q96MN9 340 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 HIST1H2BNQ99877 126 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 HIST1H2BMQ99879 126 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 ANGPTL4Q9BY76 406 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 OR51B6Q9H340 312 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 ZFP92A6NM28 416 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 TRDCB7Z8K6 153 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 WRBO00258 174 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 SLC34A2O95436 690 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 SOD3P08294 240 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 HIST1H3AP68431 136 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 TMEM267Q0VDI3 215 aaPredicted RBP12.24□□□□□ -0.45
ERCC3-203ENST00000445889 PCOLCEQ15113 449 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 HIST2H3PS2Q5TEC6 136 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 OR51H1Q8NH63 302 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 EXTL1Q92935 676 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 ZNF845Q96IR2 970 aaPredicted RBP12.24□□□□□ -0.45
ERCC3-203ENST00000445889 GNG13Q9P2W3 67 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 DMRT1Q9Y5R6 373 aa12.24□□□□□ -0.45
ERCC3-203ENST00000445889 A0A1W2PR80 420 aa12.23□□□□□ -0.45
ERCC3-203ENST00000445889 SRFP11831 508 aa12.23□□□□□ -0.45
ERCC3-203ENST00000445889 CCL4P13236 92 aa12.23□□□□□ -0.45
ERCC3-203ENST00000445889 BCL3P20749 454 aa12.23□□□□□ -0.45
ERCC3-203ENST00000445889 DEFA6Q01524 100 aa12.23□□□□□ -0.45
ERCC3-203ENST00000445889 ICAM4Q14773 271 aa12.23□□□□□ -0.45
ERCC3-203ENST00000445889 THNSL2Q86YJ6 484 aa12.23□□□□□ -0.45
ERCC3-203ENST00000445889 C1QL4Q86Z23 238 aa12.23□□□□□ -0.45
ERCC3-203ENST00000445889 GPR137CQ8N3F9 429 aa12.23□□□□□ -0.45
ERCC3-203ENST00000445889 PRR18Q8N4B5 295 aa12.23□□□□□ -0.45
ERCC3-203ENST00000445889 CCDC71LQ8N9Z2 235 aa12.23□□□□□ -0.45
ERCC3-203ENST00000445889 ABHD3Q8WU67 409 aa12.23□□□□□ -0.45
ERCC3-203ENST00000445889 S100PBPQ96BU1 408 aa12.23□□□□□ -0.45
ERCC3-203ENST00000445889 NIPSNAP3BQ9BS92 247 aa12.23□□□□□ -0.45
ERCC3-203ENST00000445889 TMEM222Q9H0R3 208 aa12.23□□□□□ -0.45
ERCC3-203ENST00000445889 A0A0G2JRQ6 117 aa12.23□□□□□ -0.45
ERCC3-203ENST00000445889 LOC102725191A0A1B0GVB3 256 aa12.23□□□□□ -0.45
ERCC3-203ENST00000445889 ZNF729A6NN14 1252 aaPredicted RBP12.23□□□□□ -0.45
ERCC3-203ENST00000445889 SCAF4O95104 1147 aaKnown RBP12.23□□□□□ -0.45
ERCC3-203ENST00000445889 GPX4P36969 197 aaPredicted RBP12.23□□□□□ -0.45
ERCC3-203ENST00000445889 GPM6AP51674 278 aa12.23□□□□□ -0.45
ERCC3-203ENST00000445889 RBM11P57052 281 aaKnown RBP12.23□□□□□ -0.45
ERCC3-203ENST00000445889 CLEC12BQ2HXU8 276 aa12.23□□□□□ -0.45
ERCC3-203ENST00000445889 AKR1C8PQ5T2L2 129 aa12.23□□□□□ -0.45
ERCC3-203ENST00000445889 LCN15Q6UWW0 184 aa12.23□□□□□ -0.45
ERCC3-203ENST00000445889 AAED1Q7RTV5 226 aa12.23□□□□□ -0.45
ERCC3-203ENST00000445889 DPPA2Q7Z7J5 298 aa12.23□□□□□ -0.45
ERCC3-203ENST00000445889 SELENOHQ8IZQ5 122 aaKnown RBP12.23□□□□□ -0.45
ERCC3-203ENST00000445889 RSG1Q9BU20 258 aa12.23□□□□□ -0.45
ERCC3-203ENST00000445889 VSIRQ9H7M9 311 aa12.23□□□□□ -0.45
ERCC3-203ENST00000445889 PLEKHF2Q9H8W4 249 aa12.23□□□□□ -0.45
ERCC3-203ENST00000445889 CXorf65A6NEN9 183 aa12.22□□□□□ -0.45
ERCC3-203ENST00000445889 HS3ST1O14792 307 aa12.22□□□□□ -0.45
ERCC3-203ENST00000445889 HSPA12AO43301 675 aa12.22□□□□□ -0.45
ERCC3-203ENST00000445889 EDN3P14138 238 aa12.22□□□□□ -0.45
ERCC3-203ENST00000445889 FUT3P21217 361 aa12.22□□□□□ -0.45
ERCC3-203ENST00000445889 CARD18P57730 90 aa12.22□□□□□ -0.45
ERCC3-203ENST00000445889 RAB11AP62491 216 aa12.22□□□□□ -0.45
ERCC3-203ENST00000445889 MRPS34P82930 218 aaKnown RBP12.22□□□□□ -0.45
ERCC3-203ENST00000445889 SLC25A24Q6NUK1 477 aa12.22□□□□□ -0.45
ERCC3-203ENST00000445889 ZNF100Q8IYN0 542 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms