RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 PSMB2P49721 201 aa16.44■□□□□ 0.22
SHANK3-203ENST00000445220 METAP1P53582 386 aa16.44■□□□□ 0.22
SHANK3-203ENST00000445220 OR11H4Q8NGC9 324 aa16.44■□□□□ 0.22
SHANK3-203ENST00000445220 MDKP21741 143 aaPredicted RBP16.44■□□□□ 0.22
SHANK3-203ENST00000445220 FCARP24071 287 aa16.44■□□□□ 0.22
SHANK3-203ENST00000445220 SRP14P37108 136 aaKnown RBP16.44■□□□□ 0.22
SHANK3-203ENST00000445220 RPS4XP62701 263 aaKnown RBP16.44■□□□□ 0.22
SHANK3-203ENST00000445220 PRICKLE4Q2TBC4 344 aa16.44■□□□□ 0.22
SHANK3-203ENST00000445220 ANKRD55Q3KP44 614 aa16.44■□□□□ 0.22
SHANK3-203ENST00000445220 LYZL2Q7Z4W2 148 aa16.44■□□□□ 0.22
SHANK3-203ENST00000445220 CARFQ8N187 725 aa16.44■□□□□ 0.22
SHANK3-203ENST00000445220 OR10AD1Q8NGE0 317 aa16.44■□□□□ 0.22
SHANK3-203ENST00000445220 SARAFQ96BY9 339 aa16.44■□□□□ 0.22
SHANK3-203ENST00000445220 TREM2Q9NZC2 230 aa16.44■□□□□ 0.22
SHANK3-203ENST00000445220 UQCR10Q9UDW1 63 aa16.44■□□□□ 0.22
SHANK3-203ENST00000445220 SP1P08047 785 aa16.44■□□□□ 0.22
SHANK3-203ENST00000445220 GPX7Q96SL4 187 aaPredicted RBP16.44■□□□□ 0.22
SHANK3-203ENST00000445220 PITX3O75364 302 aa16.43■□□□□ 0.22
SHANK3-203ENST00000445220 CD226Q15762 336 aa16.43■□□□□ 0.22
SHANK3-203ENST00000445220 ISXQ2M1V0 245 aa16.43■□□□□ 0.22
SHANK3-203ENST00000445220 GPR61Q9BZJ8 451 aa16.43■□□□□ 0.22
SHANK3-203ENST00000445220 YBX2Q9Y2T7 364 aaKnown RBP16.43■□□□□ 0.22
SHANK3-203ENST00000445220 NPIPB8E9PQR5 432 aa16.43■□□□□ 0.22
SHANK3-203ENST00000445220 TMIGD3P0DMS9 266 aaPredicted RBP16.43■□□□□ 0.22
SHANK3-203ENST00000445220 OPRK1P41145 380 aa16.43■□□□□ 0.22
SHANK3-203ENST00000445220 D2HGDHQ8N465 521 aa16.43■□□□□ 0.22
SHANK3-203ENST00000445220 SPACA9Q96E40 222 aaPredicted RBP16.43■□□□□ 0.22
SHANK3-203ENST00000445220 MOGAT1Q96PD6 335 aa16.43■□□□□ 0.22
SHANK3-203ENST00000445220 GGACTQ9BVM4 153 aa16.43■□□□□ 0.22
SHANK3-203ENST00000445220 GPR27Q9NS67 375 aa16.43■□□□□ 0.22
SHANK3-203ENST00000445220 DOK5Q9P104 306 aa16.43■□□□□ 0.22
SHANK3-203ENST00000445220 M0R296 226 aa16.43■□□□□ 0.22
SHANK3-203ENST00000445220 HINT1P49773 126 aaPredicted RBP16.43■□□□□ 0.22
SHANK3-203ENST00000445220 WDFY1Q8IWB7 410 aa16.43■□□□□ 0.22
SHANK3-203ENST00000445220 EIF4E3Q8N5X7 224 aaKnown RBP16.43■□□□□ 0.22
SHANK3-203ENST00000445220 ST6GALNAC2Q9UJ37 374 aa16.43■□□□□ 0.22
SHANK3-203ENST00000445220 OR2M5A3KFT3 312 aa16.43■□□□□ 0.22
SHANK3-203ENST00000445220 HSPB1P04792 205 aaKnown RBP16.43■□□□□ 0.22
SHANK3-203ENST00000445220 TGIF2LXQ8IUE1 241 aa16.43■□□□□ 0.22
SHANK3-203ENST00000445220 TMEM116Q8NCL8 245 aa16.43■□□□□ 0.22
SHANK3-203ENST00000445220 OR2V1Q8NHB1 315 aa16.43■□□□□ 0.22
SHANK3-203ENST00000445220 HLA-DQB1P01920 261 aa16.42■□□□□ 0.22
SHANK3-203ENST00000445220 FNDC7Q5VTL7 733 aa16.42■□□□□ 0.22
SHANK3-203ENST00000445220 SGMS2Q8NHU3 365 aa16.42■□□□□ 0.22
SHANK3-203ENST00000445220 SLC52A3Q9NQ40 469 aa16.42■□□□□ 0.22
SHANK3-203ENST00000445220 PSG11Q9UQ72 335 aa16.42■□□□□ 0.22
SHANK3-203ENST00000445220 NKX2-6A6NCS4 301 aa16.42■□□□□ 0.22
SHANK3-203ENST00000445220 CXorf65A6NEN9 183 aa16.42■□□□□ 0.22
SHANK3-203ENST00000445220 TRDCB7Z8K6 153 aa16.42■□□□□ 0.22
SHANK3-203ENST00000445220 KIR2DS2P43631 304 aa16.42■□□□□ 0.22
SHANK3-203ENST00000445220 MMP16P51512 607 aa16.42■□□□□ 0.22
SHANK3-203ENST00000445220 OR2D2Q9H210 308 aa16.42■□□□□ 0.22
SHANK3-203ENST00000445220 COL24A1Q17RW2 1714 aa16.42■□□□□ 0.22
SHANK3-203ENST00000445220 LINC01387J3KSC0 135 aa16.42■□□□□ 0.22
SHANK3-203ENST00000445220 PLPP3O14495 311 aa16.42■□□□□ 0.22
SHANK3-203ENST00000445220 CRYAAP02489 173 aa16.42■□□□□ 0.22
SHANK3-203ENST00000445220 CD1AP06126 327 aa16.42■□□□□ 0.22
SHANK3-203ENST00000445220 RPL7P18124 248 aaKnown RBP16.42■□□□□ 0.22
SHANK3-203ENST00000445220 EFNB2P52799 333 aa16.42■□□□□ 0.22
SHANK3-203ENST00000445220 SPATA45Q537H7 98 aa16.42■□□□□ 0.22
SHANK3-203ENST00000445220 WDR74Q6RFH5 385 aaPredicted RBP16.42■□□□□ 0.22
SHANK3-203ENST00000445220 C12orf54Q6X4T0 127 aa16.42■□□□□ 0.22
SHANK3-203ENST00000445220 OR10AC1Q8NH08 325 aa16.42■□□□□ 0.22
SHANK3-203ENST00000445220 PTX4Q96A99 478 aa16.42■□□□□ 0.22
SHANK3-203ENST00000445220 SMIM12Q96EX1 92 aa16.42■□□□□ 0.22
SHANK3-203ENST00000445220 ISLRO14498 428 aa16.42■□□□□ 0.22
SHANK3-203ENST00000445220 PPYP01298 95 aa16.42■□□□□ 0.22
SHANK3-203ENST00000445220 PLP1P60201 277 aa16.42■□□□□ 0.22
SHANK3-203ENST00000445220 HIST1H2BAQ96A08 127 aa16.42■□□□□ 0.22
SHANK3-203ENST00000445220 MOB3AQ96BX8 217 aa16.42■□□□□ 0.22
SHANK3-203ENST00000445220 OR4C12Q96R67 309 aa16.42■□□□□ 0.22
SHANK3-203ENST00000445220 SMPD2O60906 423 aa16.41■□□□□ 0.22
SHANK3-203ENST00000445220 FOXC1Q12948 553 aa16.41■□□□□ 0.22
SHANK3-203ENST00000445220 TRA2AQ13595 282 aaKnown RBP eCLIP16.41■□□□□ 0.22
SHANK3-203ENST00000445220 FDX2Q6P4F2 183 aa16.41■□□□□ 0.22
SHANK3-203ENST00000445220 OIT3Q8WWZ8 545 aa16.41■□□□□ 0.22
SHANK3-203ENST00000445220 COX14Q96I36 57 aa16.41■□□□□ 0.22
SHANK3-203ENST00000445220 CACNA1GO43497 2377 aa16.41■□□□□ 0.22
SHANK3-203ENST00000445220 OR2W5A6NFC9 320 aa16.41■□□□□ 0.22
SHANK3-203ENST00000445220 OR2T8A6NH00 312 aa16.41■□□□□ 0.22
SHANK3-203ENST00000445220 YBX1P67809 324 aaKnown RBP16.41■□□□□ 0.22
SHANK3-203ENST00000445220 GABRA6Q16445 453 aa16.41■□□□□ 0.22
SHANK3-203ENST00000445220 PABPC1L2AQ5JQF8 200 aa16.41■□□□□ 0.22
SHANK3-203ENST00000445220 OR8B12Q8NGG6 310 aa16.41■□□□□ 0.22
SHANK3-203ENST00000445220 EID2BQ96D98 161 aa16.41■□□□□ 0.22
SHANK3-203ENST00000445220 DLEC1Q9Y238 1755 aa16.41■□□□□ 0.22
SHANK3-203ENST00000445220 HELTA6NFD8 242 aa16.41■□□□□ 0.22
SHANK3-203ENST00000445220 MPZL1O95297 269 aa16.41■□□□□ 0.22
SHANK3-203ENST00000445220 SPINK9Q5DT21 86 aa16.41■□□□□ 0.22
SHANK3-203ENST00000445220 SCGB1D4Q6XE38 83 aa16.41■□□□□ 0.22
SHANK3-203ENST00000445220 SPNS3Q6ZMD2 512 aa16.41■□□□□ 0.22
SHANK3-203ENST00000445220 ZNF600Q6ZNG1 722 aa16.41■□□□□ 0.22
SHANK3-203ENST00000445220 GPBAR1Q8TDU6 330 aa16.41■□□□□ 0.22
SHANK3-203ENST00000445220 ASB5Q8WWX0 329 aa16.41■□□□□ 0.22
SHANK3-203ENST00000445220 OR6C3Q9NZP0 311 aa16.41■□□□□ 0.22
SHANK3-203ENST00000445220 CASP8AP2Q9UKL3 1982 aa16.41■□□□□ 0.22
SHANK3-203ENST00000445220 DSCR4P56555 118 aaPredicted RBP16.41■□□□□ 0.22
SHANK3-203ENST00000445220 LSM11P83369 360 aaKnown RBP eCLIP16.41■□□□□ 0.22
SHANK3-203ENST00000445220 PMCHL1Q16048 86 aa16.41■□□□□ 0.22
SHANK3-203ENST00000445220 HFEQ30201 348 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms