RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 ZDHHC22Q8N966 263 aa6.97□□□□□ -1.29
RIF1-205ENST00000444746 MED30Q96HR3 178 aa6.97□□□□□ -1.29
RIF1-205ENST00000444746 C12orf57Q99622 126 aa6.97□□□□□ -1.29
RIF1-205ENST00000444746 UQCC2Q9BRT2 126 aa6.97□□□□□ -1.29
RIF1-205ENST00000444746 CXorf51AA0A1B0GTR3 108 aa6.97□□□□□ -1.29
RIF1-205ENST00000444746 HSPB2A8KAH6 182 aa6.97□□□□□ -1.29
RIF1-205ENST00000444746 PIN1P1O15428 100 aa6.97□□□□□ -1.29
RIF1-205ENST00000444746 TNFRSF1AP19438 455 aa6.97□□□□□ -1.29
RIF1-205ENST00000444746 TFPI2P48307 235 aa6.97□□□□□ -1.29
RIF1-205ENST00000444746 HSPB2Q16082 182 aa6.97□□□□□ -1.29
RIF1-205ENST00000444746 WDR31Q8NA23 367 aa6.97□□□□□ -1.29
RIF1-205ENST00000444746 OR4P4Q8NGL7 312 aa6.97□□□□□ -1.29
RIF1-205ENST00000444746 OR10D4PQ8NGN7 298 aa6.97□□□□□ -1.29
RIF1-205ENST00000444746 BTF3L4Q96K17 158 aa6.97□□□□□ -1.29
RIF1-205ENST00000444746 SELENOKQ9Y6D0 94 aa6.97□□□□□ -1.29
RIF1-205ENST00000444746 TAS2R45P59539 299 aa6.97□□□□□ -1.29
RIF1-205ENST00000444746 ZNF485Q8NCK3 441 aa6.97□□□□□ -1.29
RIF1-205ENST00000444746 OR2T6Q8NHC8 308 aa6.97□□□□□ -1.29
RIF1-205ENST00000444746 HS3ST3B1Q9Y662 390 aa6.97□□□□□ -1.29
RIF1-205ENST00000444746 SCN1AP35498 2009 aa6.96□□□□□ -1.29
RIF1-205ENST00000444746 CGB1A6NKQ9 187 aa6.96□□□□□ -1.29
RIF1-205ENST00000444746 K7ESF4 209 aa6.96□□□□□ -1.29
RIF1-205ENST00000444746 CD3EP07766 207 aa6.96□□□□□ -1.29
RIF1-205ENST00000444746 PCED1AQ9H1Q7 454 aa6.96□□□□□ -1.29
RIF1-205ENST00000444746 LEUTXA8MZ59 168 aa6.96□□□□□ -1.29
RIF1-205ENST00000444746 SP9P0CG40 484 aa6.96□□□□□ -1.29
RIF1-205ENST00000444746 CD200P41217 278 aa6.96□□□□□ -1.29
RIF1-205ENST00000444746 GALR1P47211 349 aa6.96□□□□□ -1.29
RIF1-205ENST00000444746 SLC36A1Q7Z2H8 476 aa6.96□□□□□ -1.29
RIF1-205ENST00000444746 SLC24A4Q8NFF2 622 aa6.96□□□□□ -1.29
RIF1-205ENST00000444746 LURAP1Q96LR2 239 aa6.96□□□□□ -1.29
RIF1-205ENST00000444746 RAB18Q9NP72 206 aa6.96□□□□□ -1.29
RIF1-205ENST00000444746 C1QL1O75973 258 aa6.96□□□□□ -1.3
RIF1-205ENST00000444746 CST4P01036 141 aa6.96□□□□□ -1.3
RIF1-205ENST00000444746 CXCL2P19875 107 aa6.96□□□□□ -1.3
RIF1-205ENST00000444746 TGIF2LYQ8IUE0 185 aa6.96□□□□□ -1.3
RIF1-205ENST00000444746 C9orf62Q8N4C0 152 aa6.96□□□□□ -1.3
RIF1-205ENST00000444746 EDARADDQ8WWZ3 215 aa6.96□□□□□ -1.3
RIF1-205ENST00000444746 SIGLEC12Q96PQ1 595 aa6.96□□□□□ -1.3
RIF1-205ENST00000444746 MARF1Q9Y4F3 1742 aaKnown RBP6.96□□□□□ -1.3
RIF1-205ENST00000444746 CLDN14O95500 239 aa6.96□□□□□ -1.3
RIF1-205ENST00000444746 SLC6A1P30531 599 aa6.96□□□□□ -1.3
RIF1-205ENST00000444746 PRSS54Q6PEW0 395 aa6.96□□□□□ -1.3
RIF1-205ENST00000444746 RNF133Q8WVZ7 376 aa6.96□□□□□ -1.3
RIF1-205ENST00000444746 MARVELD1Q9BSK0 173 aa6.96□□□□□ -1.3
RIF1-205ENST00000444746 UCK1Q9HA47 277 aa6.96□□□□□ -1.3
RIF1-205ENST00000444746 S4R3C0 116 aa6.96□□□□□ -1.3
RIF1-205ENST00000444746 TRDCB7Z8K6 153 aa6.96□□□□□ -1.3
RIF1-205ENST00000444746 PPYP01298 95 aa6.96□□□□□ -1.3
RIF1-205ENST00000444746 HSPB1P04792 205 aaKnown RBP6.96□□□□□ -1.3
RIF1-205ENST00000444746 NPBWR2P48146 333 aa6.96□□□□□ -1.3
RIF1-205ENST00000444746 SUCLG1P53597 346 aaKnown RBP6.96□□□□□ -1.3
RIF1-205ENST00000444746 ECSCRQ19T08 205 aa6.96□□□□□ -1.3
RIF1-205ENST00000444746 ZNF66Q6ZN08 573 aa6.96□□□□□ -1.3
RIF1-205ENST00000444746 SAP25Q8TEE9 199 aa6.96□□□□□ -1.3
RIF1-205ENST00000444746 SGK494Q96LW2 274 aa6.96□□□□□ -1.3
RIF1-205ENST00000444746 RBM14Q96PK6 669 aaKnown RBP6.96□□□□□ -1.3
RIF1-205ENST00000444746 KCNK7Q9Y2U2 307 aa6.96□□□□□ -1.3
RIF1-205ENST00000444746 WSB1Q9Y6I7 421 aa6.96□□□□□ -1.3
RIF1-205ENST00000444746 LIMS1P48059 325 aa6.96□□□□□ -1.3
RIF1-205ENST00000444746 SLC35B1P78383 322 aa6.96□□□□□ -1.3
RIF1-205ENST00000444746 PJVKQ0ZLH3 352 aa6.96□□□□□ -1.3
RIF1-205ENST00000444746 RAB33BQ9H082 229 aa6.96□□□□□ -1.3
RIF1-205ENST00000444746 SHISA3A0PJX4 238 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 CDX4O14627 284 aaPredicted RBP6.95□□□□□ -1.3
RIF1-205ENST00000444746 CST2P09228 141 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 PGA4P0DJD7 388 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 PGA3P0DJD8 388 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 CNN1P51911 297 aaKnown RBP6.95□□□□□ -1.3
RIF1-205ENST00000444746 ZNF137PP52743 207 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 BPIFB3P59826 476 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 VKORC1L1Q8N0U8 176 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 OR5D13Q8NGL4 314 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 APOBEC4Q8WW27 367 aaKnown RBP6.95□□□□□ -1.3
RIF1-205ENST00000444746 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.95□□□□□ -1.3
RIF1-205ENST00000444746 A0A1W2PPC1 479 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 NUDT19A8MXV4 375 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 F5H697 171 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 RHOBP62745 196 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 EWSR1Q01844 656 aaKnown RBP eCLIP6.95□□□□□ -1.3
RIF1-205ENST00000444746 NAAAQ02083 359 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 ZNF260Q3ZCT1 412 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 SIGLECL1Q8N7X8 197 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 SAP30LQ9HAJ7 183 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 IGHV3-35A0A0C4DH35 117 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 PAGE4O60829 102 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 TMEM50BP56557 158 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 EIF3IQ13347 325 aaKnown RBP6.95□□□□□ -1.3
RIF1-205ENST00000444746 LFNGQ8NES3 379 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 DTD1Q8TEA8 209 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 ITLN1Q8WWA0 313 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 ADIPOR1Q96A54 375 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 ADAMTS7Q9UKP4 1686 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 LOC102723971A0A1B0GUV8 181 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 GOSR1O95249 250 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 REG1AP05451 166 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 PSG5Q15238 335 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 MRPL54Q6P161 138 aaKnown RBP6.95□□□□□ -1.3
RIF1-205ENST00000444746 TRAT1Q6PIZ9 186 aa6.95□□□□□ -1.3
RIF1-205ENST00000444746 FAM216AQ8WUB2 273 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms