RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 RIMS3Q9UJD0 308 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 SMCHD1A6NHR9 2005 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 IL3P08700 152 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 SLURP2P0DP57 97 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 TCN2P20062 427 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 ATP4BP51164 291 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 SUB1P53999 127 aaKnown RBP eCLIP3.2□□□□□ -1.9
UBR3-206ENST00000444475 TPI1P60174 286 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 ENDOGQ14249 297 aaKnown RBP3.2□□□□□ -1.9
UBR3-206ENST00000444475 PAFAH1B3Q15102 231 aaKnown RBP3.2□□□□□ -1.9
UBR3-206ENST00000444475 MIDNQ504T8 468 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 ATP6AP1LQ52LC2 224 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 AKR1C8PQ5T2L2 129 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 TPTE2P1Q5T6R2 138 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 STEAP4Q687X5 459 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 FBXL22Q6P050 247 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 SYCE2Q6PIF2 218 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 OAFQ86UD1 273 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 PDZD9Q8IXQ8 264 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 RBMXL3Q8N7X1 1067 aaKnown RBP3.2□□□□□ -1.9
UBR3-206ENST00000444475 ZNF615Q8N8J6 731 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 OR1J1Q8NGS3 322 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 OR10D3Q8NH80 312 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 MCFD2Q8NI22 146 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 THEM6Q8WUY1 208 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 NDFIP1Q9BT67 221 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 SNHG12Q9BXW3 62 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 CST9LQ9H4G1 147 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 GNB4Q9HAV0 340 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 GPR84Q9NQS5 396 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 ZNF780BQ9Y6R6 833 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 ARFGEF1Q9Y6D6 1849 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 OVOS2A0A0G2JMS6 1433 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 MYOM3Q5VTT5 1437 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 PLXND1Q9Y4D7 1925 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 ZNF705EA8MWA4 302 aaPredicted RBP3.2□□□□□ -1.9
UBR3-206ENST00000444475 SNURFLB1AK76 121 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 ZNF682O95780 498 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 BCL3P20749 454 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 LMO4P61968 165 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 RGNQ15493 299 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 OR7A5Q15622 319 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 LTC4SQ16873 150 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 C6orf120Q7Z4R8 191 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 TMEM150AQ86TG1 271 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 RBM23Q86U06 439 aaKnown RBP3.2□□□□□ -1.9
UBR3-206ENST00000444475 STARD4Q96DR4 205 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 SLC25A38Q96DW6 304 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 C18orf12Q96KH6 178 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 ZNF354BQ96LW1 612 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 BBC3Q96PG8 261 aaPredicted RBP3.2□□□□□ -1.9
UBR3-206ENST00000444475 KCTD14Q9BQ13 255 aaPredicted RBP3.2□□□□□ -1.9
UBR3-206ENST00000444475 LXNQ9BS40 222 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 URM1Q9BTM9 101 aaKnown RBP3.2□□□□□ -1.9
UBR3-206ENST00000444475 TMEM222Q9H0R3 208 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 SPANXCQ9NY87 97 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 COMMD9Q9P000 198 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 CARMIL3Q8ND23 1372 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 ANKRD26Q9UPS8 1709 aa3.2□□□□□ -1.9
UBR3-206ENST00000444475 BORCS7-ASMTA0A0B4J1R7 106 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 A0A0G2JLM5 398 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 A0A1B0GWB2 263 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 A0A1B0GXF2 115 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 ISPDA4D126 451 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 SHISA9B4DS77 424 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 F6UZH7 168 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 CXCL2P19875 107 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 LHX2P50458 406 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 PPP3R1P63098 170 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 PSG9Q00887 426 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 PLP2Q04941 152 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 SLC10A2Q12908 348 aaPredicted RBP3.19□□□□□ -1.9
UBR3-206ENST00000444475 LINC00242Q5T6M2 205 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 SLC18B1Q6NT16 456 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 FAM183BPQ6ZVS7 135 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 ZNF550Q7Z398 422 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 TMEM255BQ8WV15 326 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 FGF14Q92915 247 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 ZNF689Q96CS4 500 aaPredicted RBP3.19□□□□□ -1.9
UBR3-206ENST00000444475 OR52E6Q96RD3 313 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 VCXQ9H320 206 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 HCSTQ9UBK5 93 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 ALS2Q96Q42 1657 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 COL18A1P39060 1754 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 FMN2Q9NZ56 1722 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 ATG2AQ2TAZ0 1938 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 TRAV36DV7A0A075B6V5 113 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 LOC100131303A0A0U1RQF7 123 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 SELENOWP63302 87 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 TMEM187Q14656 261 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 PMVKQ15126 192 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 ZNF260Q3ZCT1 412 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 ZNF343Q6P1L6 599 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 ZNF793Q6ZN11 406 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 GDPGP1Q6ZNW5 385 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 C11orf53Q8IXP5 236 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 EEF1AKMT3Q96AZ1 226 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 BORCS7Q96B45 105 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 MYEOVQ96EZ4 313 aa3.19□□□□□ -1.9
UBR3-206ENST00000444475 SMIM8Q96KF7 97 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms