RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 ERGP11308 486 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 CTGFP29279 349 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 NTSR1P30989 418 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 G6PCP35575 357 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 P2RY6Q15077 328 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 LY6G6FQ5SQ64 297 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 OR1L3Q8NH93 324 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 PRSS3P2Q8NHM4 247 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 ERGIC1Q969X5 290 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 C5orf30Q96GV9 206 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 ZNF764Q96H86 408 aaPredicted RBP4.55□□□□□ -1.68
SCN11A-202ENST00000444237 OR6C1Q96RD1 312 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 CLEC5AQ9NY25 188 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 TBL2Q9Y4P3 447 aaKnown RBP4.55□□□□□ -1.68
SCN11A-202ENST00000444237 CITO14578 2027 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 GON4LQ3T8J9 2241 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 DEGS1O15121 323 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 SLC25A17O43808 307 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 IGLV3-25P01717 112 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 CXCL1P09341 107 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 LINC00869P0C866 280 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 SMIM13P0DJ93 91 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 CEACAM1P13688 526 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 VDAC1P21796 283 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 VIPR2P41587 438 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 RPL18Q07020 188 aaKnown RBP4.55□□□□□ -1.68
SCN11A-202ENST00000444237 HES1Q14469 280 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 RTL8BQ17RB0 113 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 FIGLAQ6QHK4 219 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 CADM4Q8NFZ8 388 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 OR52E1Q8NGJ3 308 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 OR14C36Q8NHC7 312 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 MBD3L1Q8WWY6 194 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 DMRTA2Q96SC8 542 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 INSM2Q96T92 566 aaPredicted RBP4.55□□□□□ -1.68
SCN11A-202ENST00000444237 ATP6V0BQ99437 205 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 ZNF665Q9H7R5 613 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 PLSCR2Q9NRY7 297 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 FRRS1LQ9P0K9 344 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 PIGLQ9Y2B2 252 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 LRP12Q9Y561 859 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 TRAV8-7A0A075B6U6 113 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 A0A0B4J2E0 115 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 A0A1B0GX12 115 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 GRIFINA4D1Z8 144 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 HYAL3O43820 417 aaPredicted RBP4.55□□□□□ -1.68
SCN11A-202ENST00000444237 EIF4E2O60573 245 aaKnown RBP4.55□□□□□ -1.68
SCN11A-202ENST00000444237 CTSVO60911 334 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 LDB3O75112 727 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 SNCGO76070 127 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 CA1P00915 261 aaPredicted RBP4.55□□□□□ -1.68
SCN11A-202ENST00000444237 FAM87AP0C7U9 286 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 TMEM176BQ3YBM2 270 aaPredicted RBP4.55□□□□□ -1.68
SCN11A-202ENST00000444237 C1orf140Q5VVS0 124 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 THSD4Q6ZMP0 1018 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 ERASQ7Z444 233 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 OR4D11Q8NGI4 311 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 OR13G1Q8NGZ3 307 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 CYB5D2Q8WUJ1 264 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 LOXL4Q96JB6 756 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 KCNK15Q9H427 330 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 SLC45A2Q9UMX9 530 aa4.55□□□□□ -1.68
SCN11A-202ENST00000444237 LINC01553A4QN01 128 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 MSGN1A6NI15 193 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 CORTO00230 105 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 NEURL1O76050 574 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 APODP05090 189 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 SEC11AP67812 179 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 FUT5Q11128 374 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 CD226Q15762 336 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 UNQ5815/PRO19632Q6UWF5 114 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 LHFPL2Q6ZUX7 228 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 MRPL21Q7Z2W9 205 aaKnown RBP4.54□□□□□ -1.68
SCN11A-202ENST00000444237 MRGPREQ86SM8 312 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 OR8B3Q8NGG8 313 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 OR10AG1Q8NH19 301 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 FGF13Q92913 245 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 RAB37Q96AX2 223 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 KCNS1Q96KK3 526 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 TSPAN32Q96QS1 320 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 OR2V2Q96R30 315 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 PDFQ9HBH1 243 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 C20orf141Q9NUB4 165 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 B9D1Q9UPM9 204 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 CYSLTR1Q9Y271 337 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 HS3ST2Q9Y278 367 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 TRBV5-5A0A0J9YX44 114 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 LRRC3CA6NJW4 275 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 PRAMEF26H0Y7S4 382 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 RBFOX2O43251 390 aaKnown RBP eCLIP4.54□□□□□ -1.68
SCN11A-202ENST00000444237 CT45A6P0DMU7 189 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 CT45A5P0DMU8 189 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 CT45A7P0DMV0 189 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 PSMB5P28074 263 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 PTGER4P35408 488 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 ZNF750Q32MQ0 723 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 CCSMST1Q4G0I0 132 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 CT45A1Q5HYN5 189 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 PRAMEF5Q5TYX0 476 aa4.54□□□□□ -1.68
SCN11A-202ENST00000444237 PRAMEF6Q5VXH4 476 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms