RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 SMARCD1Q96GM5 515 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 DIRAS2Q96HU8 199 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 FAM19A4Q96LR4 140 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 OR52E6Q96RD3 313 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 RRAGDQ9NQL2 400 aaPredicted RBP3.46□□□□□ -1.86
VPS50-206ENST00000443443 TAS2R5Q9NYW4 299 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 OR12D3Q9UGF7 316 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 CARHSP1Q9Y2V2 147 aaKnown RBP3.46□□□□□ -1.86
VPS50-206ENST00000443443 NUBP2Q9Y5Y2 271 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 PCDH11XQ9BZA7 1347 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 RALGAPA1Q6GYQ0 2036 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 TRAV9-2A0A087WT02 112 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 A0A1W2PQ67 120 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 OR4C46A6NHA9 309 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 RFPL4AA6NLU0 287 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 D6RAR5 112 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 RFPL4AL1F8VTS6 287 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 H0Y9J4 135 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 NDUFS5O43920 106 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 PDE6DO43924 150 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 STK16O75716 305 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 ARL6IP5O75915 188 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 OR5G3P0C626 314 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 CD1EP15812 388 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 CXCR1P25024 350 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 MIPP30301 263 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 LGALS7P47929 136 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 REG1BP48304 166 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 RPS21P63220 83 aaKnown RBP3.45□□□□□ -1.86
VPS50-206ENST00000443443 C1DQ13901 141 aaKnown RBP3.45□□□□□ -1.86
VPS50-206ENST00000443443 WHAMMP3Q1A5X7 153 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 LRRC36Q1X8D7 754 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 ZNF630Q2M218 657 aaPredicted RBP3.45□□□□□ -1.86
VPS50-206ENST00000443443 C17orf58Q2M2W7 97 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 C1orf100Q5SVJ3 147 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 FAM162BQ5T6X4 162 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 RPL13AP3Q6NVV1 102 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 C17orf82Q86X59 251 aaPredicted RBP3.45□□□□□ -1.86
VPS50-206ENST00000443443 MUC15Q8N387 334 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 C4orf32Q8N8J7 132 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 OR10D3Q8NH80 312 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 ZNF420Q8TAQ5 688 aaPredicted RBP3.45□□□□□ -1.86
VPS50-206ENST00000443443 DCPSQ96C86 337 aaKnown RBP3.45□□□□□ -1.86
VPS50-206ENST00000443443 AURKBQ96GD4 344 aaPredicted RBP3.45□□□□□ -1.86
VPS50-206ENST00000443443 ZNF285Q96NJ3 590 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 GPER1Q99527 375 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 TBX5Q99593 518 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 ULBP3Q9BZM4 244 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 CHST5Q9GZS9 411 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 OR51I2Q9H344 312 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 GLS2Q9UI32 602 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 PYCARDQ9ULZ3 195 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 SLC25A15Q9Y619 301 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 RFX7Q2KHR2 1363 aa3.45□□□□□ -1.86
VPS50-206ENST00000443443 CCDC171Q6TFL3 1326 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 IGHV1OR15-1A0A075B7D0 117 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 EXOC1LA0A1B0GW35 172 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 PRORSD1PA6NEY8 169 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 ZNF98A6NK75 572 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 K7N7A8 449 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 SLC17A3O00476 420 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 UPK2O00526 184 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 BET1O15155 118 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 YIF1AO95070 293 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 CRYGDP07320 174 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 OR4A8P0C604 315 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 LAMP1P11279 417 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 CXCL3P19876 107 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 AQP1P29972 269 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 GZMMP51124 257 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 NDUFA8P51970 172 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 CCL23P55773 120 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 H2BFSP57053 126 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 TAS2R46P59540 309 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 INCA1Q0VD86 236 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 N4BP2L1Q5TBK1 243 aaPredicted RBP3.44□□□□□ -1.86
VPS50-206ENST00000443443 ELP2Q6IA86 826 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 LCN12Q6JVE5 192 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 OPN5Q6U736 354 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 TMEM205Q6UW68 189 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 PAMR1Q6UXH9 720 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 UNQ9370/PRO34162Q6UXP9 181 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 TEX43Q6ZNM6 134 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 SLC22A18ASQ8N1D0 253 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 CADM2Q8N3J6 435 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 OR11H7Q8NGC8 314 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 OR10AD1Q8NGE0 317 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 OR2K2Q8NGT1 345 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 SRSF12Q8WXF0 261 aaKnown RBP3.44□□□□□ -1.86
VPS50-206ENST00000443443 GALNT14Q96FL9 552 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 ACY3Q96HD9 319 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 FMC1Q96HJ9 113 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 SEC22CQ9BRL7 303 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 MARVELD1Q9BSK0 173 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 GABARAPL3Q9BY60 117 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 OCR1Q9BZK8 76 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 SLC25A31Q9H0C2 315 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 SRMSQ9H3Y6 488 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 POMKQ9H5K3 350 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 EDA2RQ9HAV5 297 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms