RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 SLC17A2O00624 439 aa12.29□□□□□ -0.44
CSNK1E-210ENST00000442216 PDCD5O14737 125 aa12.29□□□□□ -0.44
CSNK1E-210ENST00000442216 NPFFO15130 113 aa12.29□□□□□ -0.44
CSNK1E-210ENST00000442216 MGMTP16455 207 aa12.29□□□□□ -0.44
CSNK1E-210ENST00000442216 FGF9P31371 208 aaPredicted RBP12.29□□□□□ -0.44
CSNK1E-210ENST00000442216 GLIPR1P48060 266 aa12.29□□□□□ -0.44
CSNK1E-210ENST00000442216 DEFB112Q30KQ8 113 aa12.29□□□□□ -0.44
CSNK1E-210ENST00000442216 MIDNQ504T8 468 aa12.29□□□□□ -0.44
CSNK1E-210ENST00000442216 HCP5Q6MZN7 132 aa12.29□□□□□ -0.44
CSNK1E-210ENST00000442216 PIP4P2Q8N4L2 257 aa12.29□□□□□ -0.44
CSNK1E-210ENST00000442216 TPRX1Q8N7U7 411 aa12.29□□□□□ -0.44
CSNK1E-210ENST00000442216 ZDHHC22Q8N966 263 aa12.29□□□□□ -0.44
CSNK1E-210ENST00000442216 SUMF2Q8NBJ7 301 aa12.29□□□□□ -0.44
CSNK1E-210ENST00000442216 Q96M66 194 aa12.29□□□□□ -0.44
CSNK1E-210ENST00000442216 DPCDQ9BVM2 203 aaPredicted RBP12.29□□□□□ -0.44
CSNK1E-210ENST00000442216 OR6C3Q9NZP0 311 aa12.29□□□□□ -0.44
CSNK1E-210ENST00000442216 RCC2Q9P258 522 aaKnown RBP12.29□□□□□ -0.44
CSNK1E-210ENST00000442216 A0A087WXM4 84 aa12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 ZNF729A6NN14 1252 aaPredicted RBP12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 RNF212BA8MTL3 300 aa12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 CRTAPO75718 401 aaPredicted RBP12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 BPNT1O95861 308 aa12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 GLAP06280 429 aa12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 IGHV1-8P0DP01 117 aa12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 MYL9P24844 172 aa12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 BAMBIQ13145 260 aa12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 KLRD1Q13241 179 aa12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 RBM39Q14498 530 aaKnown RBP12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 ATXN7L3Q14CW9 347 aaPredicted RBP12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 TAF9Q16594 264 aa12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 KRTAP24-1Q3LI83 254 aa12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 RSBN1Q5VWQ0 802 aaPredicted RBP12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 SLC35E4Q6ICL7 350 aa12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 Q6YL49 198 aa12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 TRAPPC6BQ86SZ2 158 aa12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 PDZD9Q8IXQ8 264 aa12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 ZNF565Q8N9K5 539 aa12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 TMEM104Q8NE00 496 aa12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 OR13D1Q8NGV5 346 aa12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 KCNG3Q8TAE7 436 aa12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 FAM216AQ8WUB2 273 aa12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 ZDHHC16Q969W1 377 aa12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 GFI1Q99684 422 aa12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 SELENOIQ9C0D9 397 aa12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 ZNF696Q9H7X3 374 aa12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 ESM1Q9NQ30 184 aa12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 STUB1Q9UNE7 303 aa12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 AK6Q9Y3D8 172 aaKnown RBP12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 V9GY05 133 aa12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 CUBNO60494 3623 aa12.28□□□□□ -0.44
CSNK1E-210ENST00000442216 ATRQ13535 2644 aa12.27□□□□□ -0.44
CSNK1E-210ENST00000442216 CLPXO76031 633 aa12.27□□□□□ -0.45
CSNK1E-210ENST00000442216 VSIG8P0DPA2 414 aa12.27□□□□□ -0.45
CSNK1E-210ENST00000442216 CFPP27918 469 aa12.27□□□□□ -0.45
CSNK1E-210ENST00000442216 DLX1P56177 255 aa12.27□□□□□ -0.45
CSNK1E-210ENST00000442216 ATAD3CQ5T2N8 411 aa12.27□□□□□ -0.45
CSNK1E-210ENST00000442216 OR52W1Q6IF63 320 aa12.27□□□□□ -0.45
CSNK1E-210ENST00000442216 HEPN1Q6WQI6 88 aa12.27□□□□□ -0.45
CSNK1E-210ENST00000442216 OR2W3Q7Z3T1 314 aa12.27□□□□□ -0.45
CSNK1E-210ENST00000442216 LDLRAD3Q86YD5 345 aa12.27□□□□□ -0.45
CSNK1E-210ENST00000442216 TMEM86BQ8N661 226 aa12.27□□□□□ -0.45
CSNK1E-210ENST00000442216 TSPAN14Q8NG11 270 aa12.27□□□□□ -0.45
CSNK1E-210ENST00000442216 SLC25A28Q96A46 364 aa12.27□□□□□ -0.45
CSNK1E-210ENST00000442216 BANF2Q9H503 90 aa12.27□□□□□ -0.45
CSNK1E-210ENST00000442216 PLGRKTQ9HBL7 147 aa12.27□□□□□ -0.45
CSNK1E-210ENST00000442216 VCX3AQ9NNX9 186 aa12.27□□□□□ -0.45
CSNK1E-210ENST00000442216 FAM96BQ9Y3D0 163 aa12.27□□□□□ -0.45
CSNK1E-210ENST00000442216 SOX21Q9Y651 276 aaPredicted RBP12.27□□□□□ -0.45
CSNK1E-210ENST00000442216 SESN1Q9Y6P5 492 aa12.27□□□□□ -0.45
CSNK1E-210ENST00000442216 A0A0U1RQK1 487 aa12.26□□□□□ -0.45
CSNK1E-210ENST00000442216 DNAJC9-AS1A6NH13 148 aa12.26□□□□□ -0.45
CSNK1E-210ENST00000442216 TMEM14DPA8MWL7 114 aa12.26□□□□□ -0.45
CSNK1E-210ENST00000442216 MCRIP1C9JLW8 97 aa12.26□□□□□ -0.45
CSNK1E-210ENST00000442216 HSPB6O14558 160 aa12.26□□□□□ -0.45
CSNK1E-210ENST00000442216 FBP1P09467 338 aa12.26□□□□□ -0.45
CSNK1E-210ENST00000442216 CGB3P0DN86 165 aa12.26□□□□□ -0.45
CSNK1E-210ENST00000442216 CGB7P0DN87 165 aa12.26□□□□□ -0.45
CSNK1E-210ENST00000442216 FUT3P21217 361 aa12.26□□□□□ -0.45
CSNK1E-210ENST00000442216 SAA4P35542 130 aa12.26□□□□□ -0.45
CSNK1E-210ENST00000442216 RPS27AP62979 156 aaKnown RBP12.26□□□□□ -0.45
CSNK1E-210ENST00000442216 UBA52P62987 128 aaKnown RBP12.26□□□□□ -0.45
CSNK1E-210ENST00000442216 QRFPP83859 136 aa12.26□□□□□ -0.45
CSNK1E-210ENST00000442216 NEDD8Q15843 81 aa12.26□□□□□ -0.45
CSNK1E-210ENST00000442216 RAB11BQ15907 218 aa12.26□□□□□ -0.45
CSNK1E-210ENST00000442216 OR11H6Q8NGC7 330 aa12.26□□□□□ -0.45
CSNK1E-210ENST00000442216 PLPPR1Q8TBJ4 325 aa12.26□□□□□ -0.45
CSNK1E-210ENST00000442216 MDFIQ99750 246 aa12.26□□□□□ -0.45
CSNK1E-210ENST00000442216 TM2D1Q9BX74 207 aa12.26□□□□□ -0.45
CSNK1E-210ENST00000442216 TMEM59Q9BXS4 323 aa12.26□□□□□ -0.45
CSNK1E-210ENST00000442216 LINC00574Q9H8X3 128 aa12.26□□□□□ -0.45
CSNK1E-210ENST00000442216 TXNL4BQ9NX01 149 aaKnown RBP12.26□□□□□ -0.45
CSNK1E-210ENST00000442216 ZNF581Q9P0T4 197 aa12.26□□□□□ -0.45
CSNK1E-210ENST00000442216 FBLN5Q9UBX5 448 aa12.26□□□□□ -0.45
CSNK1E-210ENST00000442216 KIF25Q9UIL4 384 aa12.26□□□□□ -0.45
CSNK1E-210ENST00000442216 SSR3Q9UNL2 185 aa12.26□□□□□ -0.45
CSNK1E-210ENST00000442216 POMT1Q9Y6A1 747 aa12.26□□□□□ -0.45
CSNK1E-210ENST00000442216 MEIKINA0A087WXM9 373 aa12.25□□□□□ -0.45
CSNK1E-210ENST00000442216 MDFIC2A0A1B0GVS7 189 aa12.25□□□□□ -0.45
CSNK1E-210ENST00000442216 TMEM30CPA0ZSE6 113 aa12.25□□□□□ -0.45
CSNK1E-210ENST00000442216 MEIOCA2RUB1 952 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms