RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 FBXW12Q6X9E4 464 aa6.93□□□□□ -1.3
CCDC39-201ENST00000442201 RNF144BQ7Z419 303 aa6.93□□□□□ -1.3
CCDC39-201ENST00000442201 IZUMO1Q8IYV9 350 aa6.93□□□□□ -1.3
CCDC39-201ENST00000442201 TMEM185AQ8NFB2 350 aa6.93□□□□□ -1.3
CCDC39-201ENST00000442201 OR1J1Q8NGS3 322 aa6.93□□□□□ -1.3
CCDC39-201ENST00000442201 C15orf40Q8WUR7 153 aa6.93□□□□□ -1.3
CCDC39-201ENST00000442201 TNFAIP8L1Q8WVP5 186 aa6.93□□□□□ -1.3
CCDC39-201ENST00000442201 GAR1Q9NY12 217 aaKnown RBP6.93□□□□□ -1.3
CCDC39-201ENST00000442201 JKAMPQ9P055 326 aa6.93□□□□□ -1.3
CCDC39-201ENST00000442201 ZGRF1Q86YA3 2104 aa6.93□□□□□ -1.3
CCDC39-201ENST00000442201 SPENQ96T58 3664 aaKnown RBP6.93□□□□□ -1.3
CCDC39-201ENST00000442201 ANKRD30BLA7E2S9 258 aa6.93□□□□□ -1.3
CCDC39-201ENST00000442201 ZNF850A8MQ14 1090 aa6.93□□□□□ -1.3
CCDC39-201ENST00000442201 CCL21O00585 134 aa6.93□□□□□ -1.3
CCDC39-201ENST00000442201 HSPA12AO43301 675 aa6.93□□□□□ -1.3
CCDC39-201ENST00000442201 CTAG2O75638 210 aa6.93□□□□□ -1.3
CCDC39-201ENST00000442201 CST4P01036 141 aa6.93□□□□□ -1.3
CCDC39-201ENST00000442201 IFNA17P01571 189 aa6.93□□□□□ -1.3
CCDC39-201ENST00000442201 RAB6AP20340 208 aa6.93□□□□□ -1.3
CCDC39-201ENST00000442201 NFYBP25208 207 aa6.93□□□□□ -1.3
CCDC39-201ENST00000442201 ZNF83P51522 516 aa6.93□□□□□ -1.3
CCDC39-201ENST00000442201 MECP2P51608 486 aaKnown RBP6.93□□□□□ -1.3
CCDC39-201ENST00000442201 FUT6P51993 359 aa6.93□□□□□ -1.3
CCDC39-201ENST00000442201 MTFR2Q6P444 385 aa6.93□□□□□ -1.3
CCDC39-201ENST00000442201 CLEC9AQ6UXN8 241 aa6.93□□□□□ -1.3
CCDC39-201ENST00000442201 LHFPL2Q6ZUX7 228 aa6.93□□□□□ -1.3
CCDC39-201ENST00000442201 OR5D18Q8NGL1 313 aa6.93□□□□□ -1.3
CCDC39-201ENST00000442201 S100A13Q99584 98 aa6.93□□□□□ -1.3
CCDC39-201ENST00000442201 OR2J1Q9GZK6 312 aa6.93□□□□□ -1.3
CCDC39-201ENST00000442201 ATG5Q9H1Y0 275 aa6.93□□□□□ -1.3
CCDC39-201ENST00000442201 RAB22AQ9UL26 194 aa6.93□□□□□ -1.3
CCDC39-201ENST00000442201 H7C417 338 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 FGF16O43320 207 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 XRCC3O43542 346 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 VSIG8P0DPA2 414 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 DAOP14920 347 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 TUBG1P23258 451 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 ATP1B3P54709 279 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 BLOC1S1P78537 153 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 PRDX4Q13162 271 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 C3orf36Q3SXR2 165 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 OR2T2Q6IF00 324 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 BHLHE23Q8NDY6 225 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 KCNG3Q8TAE7 436 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 SLC25A40Q8TBP6 338 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 CMBLQ96DG6 245 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 HIST1H2AAQ96QV6 131 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 ARL6Q9H0F7 186 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 TUBG2Q9NRH3 451 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 FBLN5Q9UBX5 448 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 POLEQ07864 2286 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 IGHV2OR16-5A0A0B4J2B6 119 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 M0R1B8 84 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 CRYAAP02489 173 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 SNRPCP09234 159 aaKnown RBP6.92□□□□□ -1.3
CCDC39-201ENST00000442201 MNDAP41218 407 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 ALDH3B1P43353 468 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 MMP15P51511 669 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 NAAAQ02083 359 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 NKPD1Q17RQ9 610 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 Q6ZTK2 550 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 OR2W3Q7Z3T1 314 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 C1orf174Q8IYL3 243 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 ZDHHC23Q8IYP9 409 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 ASB13Q8WXK3 278 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 FAM46BQ96A09 425 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 CST11Q9H112 138 aa6.92□□□□□ -1.3
CCDC39-201ENST00000442201 A0A0A6YYH2 397 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 A6NJ64 397 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 TMEM14DPA8MWL7 114 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 TRDCB7Z8K6 153 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 CTDSPLO15194 276 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 TMEM225BP0DP42 221 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 HNF1AP20823 631 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 S100A2P29034 98 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 CCKARP32238 428 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 PTH2RP49190 550 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 TAS2R20P59543 309 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 ERVS71-1P61550 626 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 MRPS10P82664 201 aaKnown RBP6.91□□□□□ -1.3
CCDC39-201ENST00000442201 QRFPP83859 136 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 FAM189A2Q15884 450 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 SLC22A6Q4U2R8 563 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 RAB12Q6IQ22 244 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 CRIP3Q6Q6R5 217 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 SSX8Q7RTT4 187 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 C5orf24Q7Z6I8 188 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 UBAC2Q8NBM4 344 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 NEK7Q8TDX7 302 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 C1orf147Q96MC9 270 aaPredicted RBP6.91□□□□□ -1.3
CCDC39-201ENST00000442201 ATG101Q9BSB4 218 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 OR10A4Q9H209 315 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 ELL3Q9HB65 397 aaPredicted RBP6.91□□□□□ -1.3
CCDC39-201ENST00000442201 MPC1Q9Y5U8 109 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 ITPR1Q14643 2758 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 TRAV18A0A075B6X5 111 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 SCGNO76038 276 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 MPIG6BO95866 241 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 HKR1P10072 659 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 SELEP16581 610 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms