RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 ST3GAL6Q9Y274 331 aa11.13□□□□□ -0.63
LTBR-202ENST00000440421 TBL2Q9Y4P3 447 aaKnown RBP11.13□□□□□ -0.63
LTBR-202ENST00000440421 RNF114Q9Y508 228 aa11.13□□□□□ -0.63
LTBR-202ENST00000440421 MEIKINA0A087WXM9 373 aa11.12□□□□□ -0.63
LTBR-202ENST00000440421 A0A1W2PP11 408 aa11.12□□□□□ -0.63
LTBR-202ENST00000440421 CD1AP06126 327 aa11.12□□□□□ -0.63
LTBR-202ENST00000440421 RAB13P51153 203 aa11.12□□□□□ -0.63
LTBR-202ENST00000440421 RBM11P57052 281 aaKnown RBP11.12□□□□□ -0.63
LTBR-202ENST00000440421 BDH1Q02338 343 aa11.12□□□□□ -0.63
LTBR-202ENST00000440421 INSL4Q14641 139 aa11.12□□□□□ -0.63
LTBR-202ENST00000440421 SPHARQ15513 63 aa11.12□□□□□ -0.63
LTBR-202ENST00000440421 MED22Q15528 200 aa11.12□□□□□ -0.63
LTBR-202ENST00000440421 FAM189A2Q15884 450 aa11.12□□□□□ -0.63
LTBR-202ENST00000440421 RNLSQ5VYX0 342 aa11.12□□□□□ -0.63
LTBR-202ENST00000440421 Q8NFD4 153 aa11.12□□□□□ -0.63
LTBR-202ENST00000440421 SGMS2Q8NHU3 365 aa11.12□□□□□ -0.63
LTBR-202ENST00000440421 NDNFQ8TB73 568 aa11.12□□□□□ -0.63
LTBR-202ENST00000440421 PLPPR1Q8TBJ4 325 aa11.12□□□□□ -0.63
LTBR-202ENST00000440421 WFDC12Q8WWY7 111 aa11.12□□□□□ -0.63
LTBR-202ENST00000440421 FOXRED1Q96CU9 486 aaPredicted RBP11.12□□□□□ -0.63
LTBR-202ENST00000440421 MALSU1Q96EH3 234 aa11.12□□□□□ -0.63
LTBR-202ENST00000440421 TMED9Q9BVK6 235 aa11.12□□□□□ -0.63
LTBR-202ENST00000440421 CLEC7AQ9BXN2 247 aa11.12□□□□□ -0.63
LTBR-202ENST00000440421 ANKRD60Q9BZ19 345 aa11.12□□□□□ -0.63
LTBR-202ENST00000440421 TAS2R3Q9NYW6 316 aa11.12□□□□□ -0.63
LTBR-202ENST00000440421 IL36GQ9NZH8 169 aa11.12□□□□□ -0.63
LTBR-202ENST00000440421 OR6C3Q9NZP0 311 aa11.12□□□□□ -0.63
LTBR-202ENST00000440421 KIF25Q9UIL4 384 aa11.12□□□□□ -0.63
LTBR-202ENST00000440421 FOXJ3Q9UPW0 622 aa11.12□□□□□ -0.63
LTBR-202ENST00000440421 MRPS28Q9Y2Q9 187 aaKnown RBP11.12□□□□□ -0.63
LTBR-202ENST00000440421 TPRKBQ9Y3C4 175 aa11.12□□□□□ -0.63
LTBR-202ENST00000440421 HILPDAQ9Y5L2 63 aa11.12□□□□□ -0.63
LTBR-202ENST00000440421 GEMIN2O14893 280 aaKnown RBP11.11□□□□□ -0.63
LTBR-202ENST00000440421 OR7C1O76099 320 aaPredicted RBP11.11□□□□□ -0.63
LTBR-202ENST00000440421 JUNBP17275 347 aaPredicted RBP11.11□□□□□ -0.63
LTBR-202ENST00000440421 GLP1RP43220 463 aa11.11□□□□□ -0.63
LTBR-202ENST00000440421 SLC35A2P78381 396 aa11.11□□□□□ -0.63
LTBR-202ENST00000440421 AANATQ16613 207 aa11.11□□□□□ -0.63
LTBR-202ENST00000440421 C17orf58Q2M2W7 97 aa11.11□□□□□ -0.63
LTBR-202ENST00000440421 OR52W1Q6IF63 320 aa11.11□□□□□ -0.63
LTBR-202ENST00000440421 HEPN1Q6WQI6 88 aa11.11□□□□□ -0.63
LTBR-202ENST00000440421 ABHD12Q8N2K0 398 aa11.11□□□□□ -0.63
LTBR-202ENST00000440421 SUMF2Q8NBJ7 301 aa11.11□□□□□ -0.63
LTBR-202ENST00000440421 OR4D6Q8NGJ1 314 aa11.11□□□□□ -0.63
LTBR-202ENST00000440421 OR13A1Q8NGR1 328 aa11.11□□□□□ -0.63
LTBR-202ENST00000440421 PIFOQ8TCI5 191 aa11.11□□□□□ -0.63
LTBR-202ENST00000440421 CNBD2Q96M20 576 aa11.11□□□□□ -0.63
LTBR-202ENST00000440421 DPCDQ9BVM2 203 aaPredicted RBP11.11□□□□□ -0.63
LTBR-202ENST00000440421 BARHL1Q9BZE3 327 aa11.11□□□□□ -0.63
LTBR-202ENST00000440421 CCDC90BQ9GZT6 254 aa11.11□□□□□ -0.63
LTBR-202ENST00000440421 ABCB10Q9NRK6 738 aa11.11□□□□□ -0.63
LTBR-202ENST00000440421 LSM2Q9Y333 95 aaKnown RBP11.11□□□□□ -0.63
LTBR-202ENST00000440421 KIAA2026Q5HYC2 2103 aa11.11□□□□□ -0.63
LTBR-202ENST00000440421 TRAV39A0A0B4J263 110 aa11.1□□□□□ -0.63
LTBR-202ENST00000440421 ZNF729A6NN14 1252 aaPredicted RBP11.1□□□□□ -0.63
LTBR-202ENST00000440421 ZNF780AO75290 641 aaPredicted RBP11.1□□□□□ -0.63
LTBR-202ENST00000440421 GTF2F2P13984 249 aa11.1□□□□□ -0.63
LTBR-202ENST00000440421 NFYBP25208 207 aa11.1□□□□□ -0.63
LTBR-202ENST00000440421 MAPK3P27361 379 aaPredicted RBP11.1□□□□□ -0.63
LTBR-202ENST00000440421 KRTAP10-3P60369 221 aa11.1□□□□□ -0.63
LTBR-202ENST00000440421 IRF3Q14653 427 aa11.1□□□□□ -0.63
LTBR-202ENST00000440421 ACSM3Q53FZ2 586 aa11.1□□□□□ -0.63
LTBR-202ENST00000440421 NHLRC3Q5JS37 347 aa11.1□□□□□ -0.63
LTBR-202ENST00000440421 ATAD3CQ5T2N8 411 aa11.1□□□□□ -0.63
LTBR-202ENST00000440421 FAM27D1Q5T7N8 215 aa11.1□□□□□ -0.63
LTBR-202ENST00000440421 MINOS1Q5TGZ0 78 aa11.1□□□□□ -0.63
LTBR-202ENST00000440421 RSBN1Q5VWQ0 802 aaPredicted RBP11.1□□□□□ -0.63
LTBR-202ENST00000440421 AWAT2Q6E213 333 aa11.1□□□□□ -0.63
LTBR-202ENST00000440421 SLC35E4Q6ICL7 350 aa11.1□□□□□ -0.63
LTBR-202ENST00000440421 BRICD5Q6PL45 260 aa11.1□□□□□ -0.63
LTBR-202ENST00000440421 GLIPR1L1Q6UWM5 242 aa11.1□□□□□ -0.63
LTBR-202ENST00000440421 THRSPQ92748 146 aa11.1□□□□□ -0.63
LTBR-202ENST00000440421 DUSP21Q9H596 190 aa11.1□□□□□ -0.63
LTBR-202ENST00000440421 C16orf95Q9H693 158 aa11.1□□□□□ -0.63
LTBR-202ENST00000440421 ZNF286AQ9HBT8 521 aa11.1□□□□□ -0.63
LTBR-202ENST00000440421 PCDHB16Q9NRJ7 776 aa11.1□□□□□ -0.63
LTBR-202ENST00000440421 MINOS1-NBL1R4GNA1 71 aa11.1□□□□□ -0.63
LTBR-202ENST00000440421 KBTBD11-OT1A0A1B0GTJ5 212 aa11.09□□□□□ -0.63
LTBR-202ENST00000440421 VGLL3A8MV65 326 aa11.09□□□□□ -0.63
LTBR-202ENST00000440421 RGS10O43665 173 aa11.09□□□□□ -0.63
LTBR-202ENST00000440421 CHST1O43916 411 aa11.09□□□□□ -0.63
LTBR-202ENST00000440421 TSPAN9O75954 239 aa11.09□□□□□ -0.63
LTBR-202ENST00000440421 ATP6V1G2O95670 118 aa11.09□□□□□ -0.63
LTBR-202ENST00000440421 HSMCR30P0CW71 290 aa11.09□□□□□ -0.63
LTBR-202ENST00000440421 HTR1DP28221 377 aa11.09□□□□□ -0.63
LTBR-202ENST00000440421 HSPA13P48723 471 aa11.09□□□□□ -0.63
LTBR-202ENST00000440421 GPR176Q14439 515 aa11.09□□□□□ -0.63
LTBR-202ENST00000440421 LTC4SQ16873 150 aa11.09□□□□□ -0.63
LTBR-202ENST00000440421 UTF1Q5T230 341 aa11.09□□□□□ -0.63
LTBR-202ENST00000440421 LIPKQ5VXJ0 399 aa11.09□□□□□ -0.63
LTBR-202ENST00000440421 TMEM219Q86XT9 240 aa11.09□□□□□ -0.63
LTBR-202ENST00000440421 MS4A15Q8N5U1 240 aa11.09□□□□□ -0.63
LTBR-202ENST00000440421 ZNF565Q8N9K5 539 aa11.09□□□□□ -0.63
LTBR-202ENST00000440421 OR4P4Q8NGL7 312 aa11.09□□□□□ -0.63
LTBR-202ENST00000440421 MRGPRDQ8TDS7 321 aa11.09□□□□□ -0.63
LTBR-202ENST00000440421 NEK7Q8TDX7 302 aa11.09□□□□□ -0.63
LTBR-202ENST00000440421 BANF2Q9H503 90 aa11.09□□□□□ -0.63
LTBR-202ENST00000440421 IFT22Q9H7X7 185 aa11.09□□□□□ -0.63
LTBR-202ENST00000440421 TCF7L1Q9HCS4 588 aa11.09□□□□□ -0.63
LTBR-202ENST00000440421 CALYQ9NYX4 217 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms