RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 SLC16A14Q7RTX9 510 aa7.86□□□□□ -1.15
COPB1-202ENST00000439561 DMRTC2Q8IXT2 367 aaPredicted RBP7.86□□□□□ -1.15
COPB1-202ENST00000439561 ZNF100Q8IYN0 542 aa7.86□□□□□ -1.15
COPB1-202ENST00000439561 MAML2Q8IZL2 1156 aaPredicted RBP7.86□□□□□ -1.15
COPB1-202ENST00000439561 OR1K1Q8NGR3 316 aa7.86□□□□□ -1.15
COPB1-202ENST00000439561 PHOSPHO2Q8TCD6 241 aa7.86□□□□□ -1.15
COPB1-202ENST00000439561 OIT3Q8WWZ8 545 aa7.86□□□□□ -1.15
COPB1-202ENST00000439561 FOXD3Q9UJU5 478 aaPredicted RBP7.86□□□□□ -1.15
COPB1-202ENST00000439561 CACNA1DQ01668 2161 aa7.86□□□□□ -1.15
COPB1-202ENST00000439561 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 ZNF816-ZNF321PA0A0X1KG74 233 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 IFITM10A6NMD0 228 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 CEACAM18A8MTB9 384 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 TRDCB7Z8K6 153 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 PDCD6O75340 191 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 SCRG1O75711 98 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 ZNF124Q15973 351 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 SLC25A47Q6Q0C1 308 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 FAM89BQ8N5H3 189 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 OR10A7Q8NGE5 316 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 OR4F5Q8NH21 305 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 TMEM171Q8WVE6 324 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 SDSLQ96GA7 329 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 ZNF845Q96IR2 970 aaPredicted RBP7.85□□□□□ -1.15
COPB1-202ENST00000439561 OR4F4Q96R69 305 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 MRPL13Q9BYD1 178 aaKnown RBP7.85□□□□□ -1.15
COPB1-202ENST00000439561 CALHM2Q9HA72 323 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 SIRT7Q9NRC8 400 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 PISDQ9UG56 409 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 PPP1R3CQ9UQK1 317 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 SPEGQ15772 3267 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 TRAV39A0A0B4J263 110 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 UBE2L5PA0A1B0GUS4 154 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 LILRA5A6NI73 299 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 TNFSF11O14788 317 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 PITX3O75364 302 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 CLDN1O95832 211 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 ZNF611Q8N823 705 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 OR13D1Q8NGV5 346 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 M1APQ8TC57 530 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 SPSB1Q96BD6 273 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 ZNF837Q96EG3 531 aaPredicted RBP7.85□□□□□ -1.15
COPB1-202ENST00000439561 MALSU1Q96EH3 234 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 GLRX2Q9NS18 164 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 FUT9Q9Y231 359 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 HSPB1P04792 205 aaKnown RBP7.85□□□□□ -1.15
COPB1-202ENST00000439561 POU2F2P09086 479 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 HNF1AP20823 631 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 PMELP40967 661 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 LBX1P52954 281 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 MYPOPQ86VE0 399 aaPredicted RBP7.85□□□□□ -1.15
COPB1-202ENST00000439561 GTF3AQ92664 365 aaKnown RBP7.85□□□□□ -1.15
COPB1-202ENST00000439561 HIST1H2BLQ99880 126 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 SLC25A22Q9H936 323 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 OR14J1Q9UGF5 321 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 PITPNC1Q9UKF7 332 aa7.85□□□□□ -1.15
COPB1-202ENST00000439561 MAP1LC3B2A6NCE7 125 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 ARGFXA6NJG6 315 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 WDR1O75083 606 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 CDS2O95674 445 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 SCTP09683 121 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 ZNF32P17041 273 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 CHRNA7P36544 502 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 GALR1P47211 349 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 SUMO3P55854 103 aaPredicted RBP7.84□□□□□ -1.15
COPB1-202ENST00000439561 LSM6P62312 80 aaKnown RBP7.84□□□□□ -1.15
COPB1-202ENST00000439561 COL13A1Q5TAT6 717 aaPredicted RBP7.84□□□□□ -1.15
COPB1-202ENST00000439561 ANKRD37Q7Z713 158 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 MSI2Q96DH6 328 aaKnown RBP7.84□□□□□ -1.15
COPB1-202ENST00000439561 ATP5SQ99766 215 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 MAP1LC3BQ9GZQ8 125 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 PRDM13Q9H4Q3 707 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 PATZ1Q9HBE1 687 aaKnown RBP7.84□□□□□ -1.15
COPB1-202ENST00000439561 PSENENQ9NZ42 101 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 AHCTF1Q8WYP5 2266 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.84□□□□□ -1.15
COPB1-202ENST00000439561 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.84□□□□□ -1.15
COPB1-202ENST00000439561 CCL2P13500 99 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 MSX1P28360 303 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 APLNRP35414 380 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 TAS2R60P59551 318 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 SRYQ05066 204 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 RTP5Q14D33 572 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.84□□□□□ -1.15
COPB1-202ENST00000439561 LHFPL2Q6ZUX7 228 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 SLC35E3Q7Z769 313 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 C1QL4Q86Z23 238 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 ZNF709Q8N972 641 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 KDF1Q8NAX2 398 aaPredicted RBP7.84□□□□□ -1.15
COPB1-202ENST00000439561 ABHD5Q8WTS1 349 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 CRISPLD2Q9H0B8 497 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 C8orf33Q9H7E9 229 aaPredicted RBP7.84□□□□□ -1.15
COPB1-202ENST00000439561 UCK1Q9HA47 277 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 RPRMQ9NS64 109 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 CBLN4Q9NTU7 201 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 MYOTQ9UBF9 498 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 CACNG5Q9UF02 275 aa7.84□□□□□ -1.15
COPB1-202ENST00000439561 IGHV1OR21-1A0A087WYE8 117 aa7.84□□□□□ -1.16
COPB1-202ENST00000439561 TUSC2O75896 110 aa7.84□□□□□ -1.16
COPB1-202ENST00000439561 BCL2P10415 239 aa7.84□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms