RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 SCAF4O95104 1147 aaKnown RBP13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 SLC34A2O95436 690 aa13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 SFTPCP11686 197 aa13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 CEACAM1P13688 526 aa13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 LIFP15018 202 aa13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 FUT3P21217 361 aa13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 ITGA3P26006 1051 aa13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 DSCR4P56555 118 aaPredicted RBP13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 PRSS12P56730 875 aa13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 DLK1P80370 383 aa13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 CDCP2Q5VXM1 449 aa13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 RAET1LQ5VY80 246 aa13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 Q6ZS49 121 aa13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 POM121Q96HA1 1249 aa13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 TREM2Q9NZC2 230 aa13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 DOK5Q9P104 306 aa13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 CUL9Q8IWT3 2517 aa13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 H0YL77 283 aa13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 SSSCA1O60232 199 aa13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 CFIP05156 583 aa13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 CYC1P08574 325 aa13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 MMP9P14780 707 aa13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 BAXQ07812 192 aa13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 DPPA2Q7Z7J5 298 aa13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 ZNF429Q86V71 674 aa13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 WDR5BQ86VZ2 330 aa13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 SELENOHQ8IZQ5 122 aaKnown RBP13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 ZNF610Q8N9Z0 462 aa13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 SUMF1Q8NBK3 374 aa13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 OR5C1Q8NGR4 320 aa13.15□□□□□ -0.3
CDC42EP4-202ENST00000439510 hCG_38984A0A1B0GV85 526 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 DUXBA0A1W2PPF3 345 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 CXCL1P09341 107 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 OMGP23515 440 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 TBC1D26Q86UD7 250 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 ZNF695Q8IW36 515 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 RBMXL1Q96E39 390 aaKnown RBP13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 PROK2Q9HC23 129 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 PARPBPQ9NWS1 579 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 ERVFRD-1P60508 538 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 MAJINQ3KP22 176 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 NMSQ5H8A3 153 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 CXorf66Q5JRM2 361 aaPredicted RBP13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 C16orf54Q6UWD8 224 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 DPPA3Q6W0C5 159 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 SLC35E3Q7Z769 313 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 CYB561D1Q8N8Q1 229 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 TVP23CQ96ET8 276 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 SF3B5Q9BWJ5 86 aaKnown RBP13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 ZNF700Q9H0M5 742 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 ZNF442Q9H7R0 627 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 SLC7A10Q9NS82 523 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 TMEM38BQ9NVV0 291 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 GAR1Q9NY12 217 aaKnown RBP13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 SLC7A11Q9UPY5 501 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 UBE2J1Q9Y385 318 aaPredicted RBP13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 A0A0J9YW62 118 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 DYNLT3P51808 116 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 NDUFA6P56556 154 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 ID3Q02535 119 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 PCOLCEQ15113 449 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 SRSF7Q16629 238 aaKnown RBP eCLIP13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 ZNF343Q6P1L6 599 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 MRPL14Q6P1L8 145 aaKnown RBP13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 NAXEQ8NCW5 288 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 CLDND2Q8NHS1 167 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 TECTBQ96PL2 329 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 SIGLEC12Q96PQ1 595 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 OPA3Q9H6K4 179 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 DKKL1Q9UK85 242 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 WSB1Q9Y6I7 421 aa13.14□□□□□ -0.31
CDC42EP4-202ENST00000439510 ADAM20O43506 726 aa13.13□□□□□ -0.31
CDC42EP4-202ENST00000439510 TMEM50AO95807 157 aa13.13□□□□□ -0.31
CDC42EP4-202ENST00000439510 S100A2P29034 98 aa13.13□□□□□ -0.31
CDC42EP4-202ENST00000439510 GLIPR1P48060 266 aa13.13□□□□□ -0.31
CDC42EP4-202ENST00000439510 VAMP2P63027 116 aa13.13□□□□□ -0.31
CDC42EP4-202ENST00000439510 PDCD1Q15116 288 aa13.13□□□□□ -0.31
CDC42EP4-202ENST00000439510 TRIM61Q5EBN2 209 aa13.13□□□□□ -0.31
CDC42EP4-202ENST00000439510 OR10G4Q8NGN3 311 aa13.13□□□□□ -0.31
CDC42EP4-202ENST00000439510 NIPSNAP3BQ9BS92 247 aa13.13□□□□□ -0.31
CDC42EP4-202ENST00000439510 SRXN1Q9BYN0 137 aa13.13□□□□□ -0.31
CDC42EP4-202ENST00000439510 FAM86C1Q9NVL1 165 aa13.13□□□□□ -0.31
CDC42EP4-202ENST00000439510 CCDC163A0A0D9SF12 145 aa13.13□□□□□ -0.31
CDC42EP4-202ENST00000439510 RPL36A-HNRNPH2H7BZ11 118 aa13.13□□□□□ -0.31
CDC42EP4-202ENST00000439510 TNFSF11O14788 317 aa13.13□□□□□ -0.31
CDC42EP4-202ENST00000439510 CCL3P10147 92 aa13.13□□□□□ -0.31
CDC42EP4-202ENST00000439510 ZNF32P17041 273 aa13.13□□□□□ -0.31
CDC42EP4-202ENST00000439510 EPHA1P21709 976 aa13.13□□□□□ -0.31
CDC42EP4-202ENST00000439510 HOXA6P31267 233 aa13.13□□□□□ -0.31
CDC42EP4-202ENST00000439510 RAC1P63000 192 aa13.13□□□□□ -0.31
CDC42EP4-202ENST00000439510 ZNF674Q2M3X9 581 aa13.13□□□□□ -0.31
CDC42EP4-202ENST00000439510 Q8NFD4 153 aa13.13□□□□□ -0.31
CDC42EP4-202ENST00000439510 OR13D1Q8NGV5 346 aa13.13□□□□□ -0.31
CDC42EP4-202ENST00000439510 PLPPR1Q8TBJ4 325 aa13.13□□□□□ -0.31
CDC42EP4-202ENST00000439510 MAGT1Q9H0U3 335 aa13.13□□□□□ -0.31
CDC42EP4-202ENST00000439510 CRLF2Q9HC73 371 aa13.13□□□□□ -0.31
CDC42EP4-202ENST00000439510 HIST1H2BKO60814 126 aa13.12□□□□□ -0.31
CDC42EP4-202ENST00000439510 HIST1H2BJP06899 126 aa13.12□□□□□ -0.31
CDC42EP4-202ENST00000439510 HIST1H2BOP23527 126 aa13.12□□□□□ -0.31
CDC42EP4-202ENST00000439510 HIST1H2BBP33778 126 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms