RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 TIMM10BQ9Y5J6 103 aa8.64□□□□□ -1.03
CDC42SE1-202ENST00000439374 DMRT1Q9Y5R6 373 aa8.64□□□□□ -1.03
CDC42SE1-202ENST00000439374 CADP27708 2225 aa8.64□□□□□ -1.03
CDC42SE1-202ENST00000439374 CCDC187A0A096LP49 1063 aa8.64□□□□□ -1.03
CDC42SE1-202ENST00000439374 A0A0G2JMM0 328 aa8.64□□□□□ -1.03
CDC42SE1-202ENST00000439374 A0A1W2PPB8 328 aa8.64□□□□□ -1.03
CDC42SE1-202ENST00000439374 A0A1W2PRS3 328 aa8.64□□□□□ -1.03
CDC42SE1-202ENST00000439374 KIR3DP1A8MWS1 328 aa8.64□□□□□ -1.03
CDC42SE1-202ENST00000439374 ST8SIA3O43173 380 aa8.64□□□□□ -1.03
CDC42SE1-202ENST00000439374 GALR2O43603 387 aaPredicted RBP8.64□□□□□ -1.03
CDC42SE1-202ENST00000439374 TRAF3IP2O43734 574 aaPredicted RBP8.64□□□□□ -1.03
CDC42SE1-202ENST00000439374 SPINK4O60575 86 aa8.64□□□□□ -1.03
CDC42SE1-202ENST00000439374 MSR1P21757 451 aa8.64□□□□□ -1.03
CDC42SE1-202ENST00000439374 PMS2P11Q13670 270 aa8.64□□□□□ -1.03
CDC42SE1-202ENST00000439374 SPINK14Q6IE38 97 aa8.64□□□□□ -1.03
CDC42SE1-202ENST00000439374 WDR74Q6RFH5 385 aaPredicted RBP8.64□□□□□ -1.03
CDC42SE1-202ENST00000439374 SELENOKQ9Y6D0 94 aa8.64□□□□□ -1.03
CDC42SE1-202ENST00000439374 DSPP15924 2871 aaKnown RBP8.64□□□□□ -1.03
CDC42SE1-202ENST00000439374 EREGO14944 169 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 DHHO43323 396 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 CDX1P47902 265 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 LSM6P62312 80 aaKnown RBP8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 RTL6Q6ICC9 239 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 FAM166AQ6J272 317 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 ZNF66Q6ZN08 573 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 SLC16A14Q7RTX9 510 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 ERASQ7Z444 233 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 NFAM1Q8NET5 270 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 GJC3Q8NFK1 279 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 OR10AD1Q8NGE0 317 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 CPNE4Q96A23 557 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 PLPPR2Q96GM1 343 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 MFRPQ9BY79 579 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 UCK1Q9HA47 277 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 PARP11Q9NR21 331 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 ERRFI1Q9UJM3 462 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 A0A0J9YW62 118 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 BPNT1O95861 308 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 DYNLT3P51808 116 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 SHBQ15464 509 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 SNAI3Q3KNW1 292 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 FBXL14Q8N1E6 418 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 SLC35G3Q8N808 338 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 PECRQ9BY49 303 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 OPA3Q9H6K4 179 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 USF3Q68DE3 2245 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 LOC102724200A0A096LPH7 203 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 A0A1W2PNV4 684 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 ST8SIA5O15466 376 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 ADAM20O43506 726 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 GATCO43716 136 aaKnown RBP8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 CHRNA7P36544 502 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 WNT5AP41221 380 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 PLCXD3Q63HM9 321 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 CALHM1Q8IU99 346 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 ABHD3Q8WU67 409 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 IL22RA2Q969J5 263 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 ELOVL1Q9BW60 279 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 LIME1Q9H400 295 aa8.63□□□□□ -1.03
CDC42SE1-202ENST00000439374 DEDDO75618 318 aa8.62□□□□□ -1.03
CDC42SE1-202ENST00000439374 NKX2-1P43699 371 aaPredicted RBP8.62□□□□□ -1.03
CDC42SE1-202ENST00000439374 PLGLB1Q02325 96 aa8.62□□□□□ -1.03
CDC42SE1-202ENST00000439374 CEACAM16Q2WEN9 425 aa8.62□□□□□ -1.03
CDC42SE1-202ENST00000439374 C17orf82Q86X59 251 aaPredicted RBP8.62□□□□□ -1.03
CDC42SE1-202ENST00000439374 FAM185AQ8N0U4 392 aa8.62□□□□□ -1.03
CDC42SE1-202ENST00000439374 ZNF441Q8N8Z8 693 aa8.62□□□□□ -1.03
CDC42SE1-202ENST00000439374 EMG1Q92979 244 aaKnown RBP8.62□□□□□ -1.03
CDC42SE1-202ENST00000439374 SPTSSAQ969W0 71 aa8.62□□□□□ -1.03
CDC42SE1-202ENST00000439374 IGKV1-9A0A0C4DH69 117 aa8.62□□□□□ -1.03
CDC42SE1-202ENST00000439374 RFPL3SP0C7P2 107 aa8.62□□□□□ -1.03
CDC42SE1-202ENST00000439374 ZNF32P17041 273 aa8.62□□□□□ -1.03
CDC42SE1-202ENST00000439374 TAS2R46P59540 309 aa8.62□□□□□ -1.03
CDC42SE1-202ENST00000439374 UBE2G2P60604 165 aa8.62□□□□□ -1.03
CDC42SE1-202ENST00000439374 EWSR1Q01844 656 aaKnown RBP eCLIP8.62□□□□□ -1.03
CDC42SE1-202ENST00000439374 NAAAQ02083 359 aa8.62□□□□□ -1.03
CDC42SE1-202ENST00000439374 DOK3Q7L591 496 aa8.62□□□□□ -1.03
CDC42SE1-202ENST00000439374 TIPARPQ7Z3E1 657 aaKnown RBP8.62□□□□□ -1.03
CDC42SE1-202ENST00000439374 OR5AS1Q8N127 324 aa8.62□□□□□ -1.03
CDC42SE1-202ENST00000439374 C12orf49Q9H741 205 aa8.62□□□□□ -1.03
CDC42SE1-202ENST00000439374 OR14J1Q9UGF5 321 aa8.62□□□□□ -1.03
CDC42SE1-202ENST00000439374 PPIAL4AQ9Y536 164 aa8.62□□□□□ -1.03
CDC42SE1-202ENST00000439374 TIMM8BQ9Y5J9 83 aaPredicted RBP8.62□□□□□ -1.03
CDC42SE1-202ENST00000439374 SPTAN1Q13813 2472 aaKnown RBP8.62□□□□□ -1.03
CDC42SE1-202ENST00000439374 ARFGEF3Q5TH69 2177 aa8.62□□□□□ -1.03
CDC42SE1-202ENST00000439374 E5RGE8 158 aa8.61□□□□□ -1.03
CDC42SE1-202ENST00000439374 PPIHO43447 177 aaKnown RBP8.61□□□□□ -1.03
CDC42SE1-202ENST00000439374 IGHV2-5P01817 119 aa8.61□□□□□ -1.03
CDC42SE1-202ENST00000439374 METTL15P1P0C7V9 234 aa8.61□□□□□ -1.03
CDC42SE1-202ENST00000439374 HOXB1P14653 301 aaPredicted RBP8.61□□□□□ -1.03
CDC42SE1-202ENST00000439374 IGFBP3P17936 291 aaPredicted RBP8.61□□□□□ -1.03
CDC42SE1-202ENST00000439374 HOXA5P20719 270 aa8.61□□□□□ -1.03
CDC42SE1-202ENST00000439374 IL2RGP31785 369 aa8.61□□□□□ -1.03
CDC42SE1-202ENST00000439374 P2RY6Q15077 328 aa8.61□□□□□ -1.03
CDC42SE1-202ENST00000439374 MAML2Q8IZL2 1156 aaPredicted RBP8.61□□□□□ -1.03
CDC42SE1-202ENST00000439374 CHST5Q9GZS9 411 aa8.61□□□□□ -1.03
CDC42SE1-202ENST00000439374 SEBOXQ9HB31 216 aaPredicted RBP8.61□□□□□ -1.03
CDC42SE1-202ENST00000439374 SLC17A5Q9NRA2 495 aa8.61□□□□□ -1.03
CDC42SE1-202ENST00000439374 SLC2A9Q9NRM0 540 aa8.61□□□□□ -1.03
CDC42SE1-202ENST00000439374 KCNS2Q9ULS6 477 aa8.61□□□□□ -1.03
CDC42SE1-202ENST00000439374 NSG2Q9Y328 171 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms