RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 DBX2Q6ZNG2 339 aa11.71□□□□□ -0.53
PCNX3-202ENST00000439247 CMTM1Q8IZ96 169 aa11.71□□□□□ -0.53
PCNX3-202ENST00000439247 PLPP5Q8NEB5 264 aa11.71□□□□□ -0.53
PCNX3-202ENST00000439247 UNKLQ9H9P5 680 aaKnown RBP11.71□□□□□ -0.53
PCNX3-202ENST00000439247 P4HTMQ9NXG6 502 aa11.71□□□□□ -0.53
PCNX3-202ENST00000439247 V9GYS6 101 aa11.71□□□□□ -0.53
PCNX3-202ENST00000439247 C3orf85A0A1B0GTC6 90 aa11.71□□□□□ -0.54
PCNX3-202ENST00000439247 HNRNPKP61978 463 aaKnown RBP eCLIP11.71□□□□□ -0.54
PCNX3-202ENST00000439247 GRB2P62993 217 aaKnown RBP11.71□□□□□ -0.54
PCNX3-202ENST00000439247 CFHR1Q03591 330 aa11.71□□□□□ -0.54
PCNX3-202ENST00000439247 ZNF266Q14584 549 aa11.71□□□□□ -0.54
PCNX3-202ENST00000439247 SPIN3Q5JUX0 258 aa11.71□□□□□ -0.54
PCNX3-202ENST00000439247 ZNF664Q8N3J9 261 aa11.71□□□□□ -0.54
PCNX3-202ENST00000439247 LRTM2Q8N967 370 aa11.71□□□□□ -0.54
PCNX3-202ENST00000439247 RBM24Q9BX46 236 aaKnown RBP11.71□□□□□ -0.54
PCNX3-202ENST00000439247 ZNF665Q9H7R5 613 aa11.71□□□□□ -0.54
PCNX3-202ENST00000439247 PILRBQ9UKJ0 227 aa11.71□□□□□ -0.54
PCNX3-202ENST00000439247 WASF3Q9UPY6 502 aa11.71□□□□□ -0.54
PCNX3-202ENST00000439247 SMCO3A2RU48 225 aa11.7□□□□□ -0.54
PCNX3-202ENST00000439247 IGLV3-1P01715 115 aa11.7□□□□□ -0.54
PCNX3-202ENST00000439247 PATE4P0C8F1 98 aa11.7□□□□□ -0.54
PCNX3-202ENST00000439247 NUBP1P53384 320 aa11.7□□□□□ -0.54
PCNX3-202ENST00000439247 ZNF506Q5JVG8 444 aa11.7□□□□□ -0.54
PCNX3-202ENST00000439247 FAM90A2PQ658T7 463 aa11.7□□□□□ -0.54
PCNX3-202ENST00000439247 CPNE4Q96A23 557 aaPredicted RBP11.7□□□□□ -0.54
PCNX3-202ENST00000439247 SDHAF3Q9NRP4 125 aa11.7□□□□□ -0.54
PCNX3-202ENST00000439247 ZNF705GA8MUZ8 300 aaPredicted RBP11.7□□□□□ -0.54
PCNX3-202ENST00000439247 PITX3O75364 302 aa11.7□□□□□ -0.54
PCNX3-202ENST00000439247 ZNF133P52736 654 aaPredicted RBP11.7□□□□□ -0.54
PCNX3-202ENST00000439247 ENDOGQ14249 297 aaKnown RBP11.7□□□□□ -0.54
PCNX3-202ENST00000439247 OR8G1Q15617 311 aa11.7□□□□□ -0.54
PCNX3-202ENST00000439247 SP5Q6BEB4 398 aaPredicted RBP11.7□□□□□ -0.54
PCNX3-202ENST00000439247 LCN15Q6UWW0 184 aa11.7□□□□□ -0.54
PCNX3-202ENST00000439247 SSX7Q7RTT5 188 aa11.7□□□□□ -0.54
PCNX3-202ENST00000439247 ZNF385AQ96PM9 386 aaKnown RBP11.7□□□□□ -0.54
PCNX3-202ENST00000439247 PLEK2Q9NYT0 353 aa11.7□□□□□ -0.54
PCNX3-202ENST00000439247 EXPH5Q8NEV8 1989 aa11.7□□□□□ -0.54
PCNX3-202ENST00000439247 C9J4A7 227 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 LMO7DNF2Z398 122 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 M0R135 149 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 HSPB1P04792 205 aaKnown RBP11.69□□□□□ -0.54
PCNX3-202ENST00000439247 GZMBP10144 247 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 ZFP36L1Q07352 338 aaKnown RBP11.69□□□□□ -0.54
PCNX3-202ENST00000439247 MYPOPQ86VE0 399 aaPredicted RBP11.69□□□□□ -0.54
PCNX3-202ENST00000439247 THNSL2Q86YJ6 484 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 OR6X1Q8NH79 312 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 ZNF799Q96GE5 643 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 WFIKKN1Q96NZ8 548 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 RSG1Q9BU20 258 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 METTL9Q9H1A3 318 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 UBE2J1Q9Y385 318 aaPredicted RBP11.69□□□□□ -0.54
PCNX3-202ENST00000439247 COL5A1P20908 1838 aaPredicted RBP11.69□□□□□ -0.54
PCNX3-202ENST00000439247 TNRC6BQ9UPQ9 1833 aaKnown RBP11.69□□□□□ -0.54
PCNX3-202ENST00000439247 ELOA3CA0A087WX78 387 aaPredicted RBP11.69□□□□□ -0.54
PCNX3-202ENST00000439247 TRBV11-1A0A0K0K1C0 115 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 ARGFXA6NJG6 315 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 MPPED1O15442 326 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 CFIP05156 583 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 SPINK2P20155 84 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 VAMP2P63027 116 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 PRSS8Q16651 343 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 PRAMEF20Q5VT98 475 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 C1orf87Q8N0U7 546 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 MOB3AQ96BX8 217 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 PLEKHF2Q9H8W4 249 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 DIDO1Q9BTC0 2240 aaKnown RBP11.69□□□□□ -0.54
PCNX3-202ENST00000439247 CACNA1HO95180 2353 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 TRDCB7Z8K6 153 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 EREGO14944 169 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 CHST1O43916 411 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 TUBG1P23258 451 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 GNRHRP30968 328 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 HERV-K104P61576 105 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 HIST2H3PS2Q5TEC6 136 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 TBC1D26Q86UD7 250 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 ZNF695Q8IW36 515 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 M1APQ8TC57 530 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 PP6455Q8WZ26 134 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 LURAP1Q96LR2 239 aa11.69□□□□□ -0.54
PCNX3-202ENST00000439247 LYRM2Q9NU23 88 aaPredicted RBP11.69□□□□□ -0.54
PCNX3-202ENST00000439247 PPYP01298 95 aa11.68□□□□□ -0.54
PCNX3-202ENST00000439247 AMBPP02760 352 aa11.68□□□□□ -0.54
PCNX3-202ENST00000439247 G0S2P27469 103 aa11.68□□□□□ -0.54
PCNX3-202ENST00000439247 TMEM267Q0VDI3 215 aaPredicted RBP11.68□□□□□ -0.54
PCNX3-202ENST00000439247 ZNF100Q8IYN0 542 aa11.68□□□□□ -0.54
PCNX3-202ENST00000439247 OR4X1Q8NH49 305 aa11.68□□□□□ -0.54
PCNX3-202ENST00000439247 UCN2Q96RP3 112 aa11.68□□□□□ -0.54
PCNX3-202ENST00000439247 SYT3Q9BQG1 590 aa11.68□□□□□ -0.54
PCNX3-202ENST00000439247 SMDT1Q9H4I9 107 aa11.68□□□□□ -0.54
PCNX3-202ENST00000439247 METTL7AQ9H8H3 244 aa11.68□□□□□ -0.54
PCNX3-202ENST00000439247 SIRT7Q9NRC8 400 aa11.68□□□□□ -0.54
PCNX3-202ENST00000439247 SLC7A10Q9NS82 523 aa11.68□□□□□ -0.54
PCNX3-202ENST00000439247 ST3GAL6Q9Y274 331 aa11.68□□□□□ -0.54
PCNX3-202ENST00000439247 HSPB6O14558 160 aa11.68□□□□□ -0.54
PCNX3-202ENST00000439247 HSPA12AO43301 675 aa11.68□□□□□ -0.54
PCNX3-202ENST00000439247 CYTIPO60759 359 aa11.68□□□□□ -0.54
PCNX3-202ENST00000439247 IL18BPO95998 194 aa11.68□□□□□ -0.54
PCNX3-202ENST00000439247 TSPAN7P41732 249 aa11.68□□□□□ -0.54
PCNX3-202ENST00000439247 ARL6IP1Q15041 203 aa11.68□□□□□ -0.54
PCNX3-202ENST00000439247 P2RY6Q15077 328 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms