RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 OR7G1Q8NGA0 311 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 OR5T3Q8NGG3 340 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 OR4A15Q8NGL6 344 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 GPR151Q8TDV0 419 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 PYROXD1Q8WU10 500 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 FAM172AQ8WUF8 416 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 DCAKDQ8WVC6 231 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 DEDD2Q8WXF8 326 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 CACNG8Q8WXS5 425 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 YIPF5Q969M3 257 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 SMARCD1Q96GM5 515 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 JSRP1Q96MG2 331 aaPredicted RBP1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 ZFP3Q96NJ6 502 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 MCEEQ96PE7 176 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 QKIQ96PU8 341 aaKnown RBP eCLIP1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 SLC38A2Q96QD8 506 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 KCNA7Q96RP8 456 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 PEBP4Q96S96 227 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 EBNA1BP2Q99848 306 aaKnown RBP1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 SLC35A5Q9BS91 424 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 NIPSNAP3BQ9BS92 247 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 SNRNP25Q9BV90 132 aaKnown RBP1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 KIFC1Q9BW19 673 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 SRXN1Q9BYN0 137 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 ACTR6Q9GZN1 396 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 RHBGQ9H310 441 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 TRABDQ9H4I3 376 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 CAB39LQ9H9S4 337 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 PLGRKTQ9HBL7 147 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 MMP26Q9NRE1 261 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 TREX1Q9NSU2 369 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 NKIRAS1Q9NYS0 192 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 CD274Q9NZQ7 290 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 HMGXB4Q9UGU5 601 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 BTNL2Q9UIR0 455 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 ENPP5Q9UJA9 477 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 PITPNC1Q9UKF7 332 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 COPS3Q9UNS2 423 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 SLC22A14Q9Y267 594 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 ARL2BPQ9Y2Y0 163 aa1.44□□□□□ -2.18
HMGB1P18-201ENST00000438801 IGHV1OR15-1A0A075B7D0 117 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 GOLGA8QA0A0J9YX86 632 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 A0A0J9YXY3 114 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 LOC100131303A0A0U1RQF7 123 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 IQANK1A0A1B0GTG1 560 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 EXOC1LA0A1B0GW35 172 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 A0A1B0GWB2 263 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 TMEM213A2RRL7 107 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 MGAT4DA6NG13 374 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 FAM74A7A6NL05 159 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 ZNF99A8MXY4 864 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 E7EQL1 145 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 RNASEK-C17orf49H0YIS7 233 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 H7C0C1 242 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 GFYI3L273 518 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 SIRPB1O00241 398 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 ITGB1BP1O14713 200 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 RAB29O14966 203 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 EDF1O60869 148 aaKnown RBP1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 OR2B3O76000 313 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 OR2J3O76001 311 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 DIRAS1O95057 198 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 AP2A1O95782 977 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 FADS2O95864 444 aaKnown RBP1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 IGLV3-27P01718 113 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 GAPDHP04406 335 aaKnown RBP1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 BPGMP07738 259 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 PGAM1P18669 254 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 XRCC1P18887 633 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 MAGP20916 626 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 KITLGP21583 273 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 VDAC1P21796 283 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 BGNP21810 368 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 SPRR2DP22532 72 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 ALDH3A1P30838 453 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 FUSP35637 526 aaKnown RBP eCLIP1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 SERPINB5P36952 375 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 TGFBR2P37173 567 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 GPR6P46095 362 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 YAP1P46937 504 aaKnown RBP1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 TCTAP57738 103 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 NAA20P61599 178 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 TSPAN5P62079 268 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 TRIP13Q15645 432 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 TSC22D1Q15714 1073 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 CHI3L2Q15782 390 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 SLC5A12Q1EHB4 618 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 FAM74A3Q4VXF1 159 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 SPANXN3Q5MJ09 141 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 C9orf135Q5VTT2 229 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 HHATQ5VTY9 493 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 SYPL2Q5VXT5 272 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 ANKRD22Q5VYY1 191 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 METTL21CQ5VZV1 264 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 NCBP2-AS2Q69YL0 99 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 TIGD3Q6B0B8 471 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 OR52W1Q6IF63 320 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 KCNIP4Q6PIL6 250 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 ENPP6Q6UWR7 440 aa1.43□□□□□ -2.18
HMGB1P18-201ENST00000438801 TMIGD1Q6UXZ0 262 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms