RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 SPICQ8N5J4 248 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 CA5BP1Q8WTZ4 195 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 TINAGQ9UJW2 476 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 PPP1R3CQ9UQK1 317 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 PKDREJQ9NTG1 2253 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 MSTNO14793 375 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 PHOX2AO14813 284 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 OR2A4O95047 310 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 FGF2P09038 288 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 FPR2P25090 351 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 C11orf87Q6NUJ2 197 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 MITD1Q8WV92 249 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 OR2A7Q96R45 310 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 OR2J1Q9GZK6 312 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 CST7O76096 145 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 OR2C1O95371 312 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 SCGB1D1O95968 90 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 CALCRP30988 508 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 ELLP55199 621 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 DMBX1Q8NFW5 382 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 OR10AD1Q8NGE0 317 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 OR2G3Q8NGZ4 309 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 TMEM54Q969K7 222 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 SLC25A32Q9H2D1 315 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 GCM1Q9NP62 436 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 GFOD1Q9NXC2 390 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 TSTD3H0UI37 97 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 CDIPTO14735 213 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 PPP1R2P9O14990 202 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 CPN1P15169 458 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 ADIRFQ15847 76 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 INO80CQ6PI98 192 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 OR13C8Q8NGS7 320 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 SLC25A40Q8TBP6 338 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 RXFP4Q8TDU9 374 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 RAB39BQ96DA2 213 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 SOX7Q9BT81 388 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 LPAR5Q9H1C0 372 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 WNT5BQ9H1J7 359 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 RFPL4AA6NLU0 287 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 RFPL4AL1F8VTS6 287 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 NEURL1O76050 574 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 RPL12P30050 165 aaKnown RBP10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 PTGDSP41222 190 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 TNFSF10P50591 281 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 GUCA2BQ16661 112 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 OR2B11Q5JQS5 317 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 ATPAF1Q5TC12 328 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 BHLHA15Q7RTS1 189 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 ASCL5Q7RTU5 278 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 RPS4Y2Q8TD47 263 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 ANXA10Q9UJ72 324 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 KCNK7Q9Y2U2 307 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 NKX2-1P43699 371 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 DHODHQ02127 395 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 PTPRSQ13332 1948 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 CST9LP1Q5W188 147 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 LRP11Q86VZ4 500 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 OR8U1Q8NH10 309 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 RNF150Q9ULK6 438 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 AMDHD2Q9Y303 409 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 NKX6-3A6NJ46 265 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 HMGB3O15347 200 aaKnown RBP10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 IFNA10P01566 189 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 IFNA4P05014 189 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 MICBQ29980 383 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 ZNF610Q8N9Z0 462 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 OR5A2Q8NGI9 324 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 PRO3102Q9H379 93 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 IFT22Q9H7X7 185 aa10.04□□□□□ -0.8
TRAPPC9-202ENST00000438773 hCG_1809904A0A1W2PP81 198 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 A0A1W2PR64 198 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 A0A1W2PRV1 198 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 RAB32Q13637 225 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 TMEM211Q6ICI0 200 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 C2orf50Q96LR7 162 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 GNG13Q9P2W3 67 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 MED13LQ71F56 2210 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 C9orf170A2RU37 121 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 PINLYPA6NC86 204 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 LRRC3CA6NJW4 275 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 AHRRA9YTQ3 701 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 DNASE2O00115 360 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 BCL2L11O43521 198 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 NGFP01138 241 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 SFTA3P0C7M3 94 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 UBE2V2Q15819 145 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 OR8G2PQ6IF36 304 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 TMEM108Q6UXF1 575 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 PLPPR2Q96GM1 343 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 LURAP1Q96LR2 239 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 UNKLQ9H9P5 680 aaKnown RBP10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 PATZ1Q9HBE1 687 aaKnown RBP10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 TUBAL3A6NHL2 446 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 ZNF98A6NK75 572 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 RNASEK-C17orf49H0YIS7 233 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 PTGER4P35408 488 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 Q0VFX4 171 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 ARSJQ5FYB0 599 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 PHYHD1Q5SRE7 291 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms