RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 ZNF649Q9BS31 505 aa14.41□□□□□ -0.1
GTF3A-204ENST00000438571 CALYQ9NYX4 217 aa14.41□□□□□ -0.1
GTF3A-204ENST00000438571 KIF25Q9UIL4 384 aa14.41□□□□□ -0.1
GTF3A-204ENST00000438571 PCDHGB5Q9Y5G0 923 aa14.41□□□□□ -0.1
GTF3A-204ENST00000438571 TRAV39A0A0B4J263 110 aa14.4□□□□□ -0.1
GTF3A-204ENST00000438571 TRAV24A0A0B4J272 114 aa14.4□□□□□ -0.1
GTF3A-204ENST00000438571 A0A1W2PPI3 338 aa14.4□□□□□ -0.1
GTF3A-204ENST00000438571 H3BNX3 289 aa14.4□□□□□ -0.1
GTF3A-204ENST00000438571 SULT1B1O43704 296 aa14.4□□□□□ -0.1
GTF3A-204ENST00000438571 ZFPL1O95159 310 aa14.4□□□□□ -0.1
GTF3A-204ENST00000438571 TMEM225BP0DP42 221 aa14.4□□□□□ -0.1
GTF3A-204ENST00000438571 GABRB1P18505 474 aa14.4□□□□□ -0.1
GTF3A-204ENST00000438571 CEACAM3P40198 252 aa14.4□□□□□ -0.1
GTF3A-204ENST00000438571 SLC25A30Q5SVS4 291 aa14.4□□□□□ -0.1
GTF3A-204ENST00000438571 ZNF691Q5VV52 312 aa14.4□□□□□ -0.1
GTF3A-204ENST00000438571 ZNF329Q86UD4 541 aa14.4□□□□□ -0.1
GTF3A-204ENST00000438571 OSR2Q8N2R0 312 aa14.4□□□□□ -0.1
GTF3A-204ENST00000438571 LINC00482Q8N8I6 264 aa14.4□□□□□ -0.1
GTF3A-204ENST00000438571 CHST4Q8NCG5 386 aa14.4□□□□□ -0.1
GTF3A-204ENST00000438571 OR51T1Q8NGJ9 327 aa14.4□□□□□ -0.1
GTF3A-204ENST00000438571 OR10K1Q8NGX5 313 aa14.4□□□□□ -0.1
GTF3A-204ENST00000438571 OR9G1Q8NH87 305 aa14.4□□□□□ -0.1
GTF3A-204ENST00000438571 TOMM40LQ969M1 308 aa14.4□□□□□ -0.1
GTF3A-204ENST00000438571 NOL4LQ96MY1 436 aaPredicted RBP14.4□□□□□ -0.1
GTF3A-204ENST00000438571 LINC00527Q9UJ94 153 aa14.4□□□□□ -0.1
GTF3A-204ENST00000438571 MOB4Q9Y3A3 225 aa14.4□□□□□ -0.1
GTF3A-204ENST00000438571 HSPE1-MOB4S4R3N1 261 aa14.4□□□□□ -0.1
GTF3A-204ENST00000438571 KBTBD11-OT1A0A1B0GTJ5 212 aa14.39□□□□□ -0.11
GTF3A-204ENST00000438571 FAM90A18PA6NE21 464 aa14.39□□□□□ -0.11
GTF3A-204ENST00000438571 FAM90A16PA6NEW6 464 aa14.39□□□□□ -0.11
GTF3A-204ENST00000438571 FAM90A20PA6NIJ5 464 aa14.39□□□□□ -0.11
GTF3A-204ENST00000438571 FAM90A9PA6NNJ1 464 aa14.39□□□□□ -0.11
GTF3A-204ENST00000438571 FAM90A12PA8MX19 464 aa14.39□□□□□ -0.11
GTF3A-204ENST00000438571 FAM90A5PA8MXJ8 464 aa14.39□□□□□ -0.11
GTF3A-204ENST00000438571 GABRPO00591 440 aa14.39□□□□□ -0.11
GTF3A-204ENST00000438571 FAM90A15PP0C7V4 464 aa14.39□□□□□ -0.11
GTF3A-204ENST00000438571 FAM90A13PP0C7W8 464 aa14.39□□□□□ -0.11
GTF3A-204ENST00000438571 FAM90A14PP0C7W9 464 aa14.39□□□□□ -0.11
GTF3A-204ENST00000438571 FAM90A24PP0C7X0 464 aa14.39□□□□□ -0.11
GTF3A-204ENST00000438571 DBTP11182 482 aaKnown RBP14.39□□□□□ -0.11
GTF3A-204ENST00000438571 GNG10P50151 68 aa14.39□□□□□ -0.11
GTF3A-204ENST00000438571 ARHGDIBP52566 201 aa14.39□□□□□ -0.11
GTF3A-204ENST00000438571 PRRX1P54821 245 aa14.39□□□□□ -0.11
GTF3A-204ENST00000438571 PIGYQ3MUY2 71 aa14.39□□□□□ -0.11
GTF3A-204ENST00000438571 PAN3Q58A45 887 aaKnown RBP14.39□□□□□ -0.11
GTF3A-204ENST00000438571 DRAM1Q8N682 238 aa14.39□□□□□ -0.11
GTF3A-204ENST00000438571 RGP1Q92546 391 aaPredicted RBP14.39□□□□□ -0.11
GTF3A-204ENST00000438571 AMBNQ9NP70 447 aa14.39□□□□□ -0.11
GTF3A-204ENST00000438571 MEIKINA0A087WXM9 373 aa14.38□□□□□ -0.11
GTF3A-204ENST00000438571 A0A1W2PPE3 182 aa14.38□□□□□ -0.11
GTF3A-204ENST00000438571 PSMB11A5LHX3 300 aa14.38□□□□□ -0.11
GTF3A-204ENST00000438571 H3BUI4 141 aa14.38□□□□□ -0.11
GTF3A-204ENST00000438571 J3QR06 171 aa14.38□□□□□ -0.11
GTF3A-204ENST00000438571 SSTR5P35346 364 aa14.38□□□□□ -0.11
GTF3A-204ENST00000438571 MNDAP41218 407 aa14.38□□□□□ -0.11
GTF3A-204ENST00000438571 GALEQ14376 348 aa14.38□□□□□ -0.11
GTF3A-204ENST00000438571 RSBN1Q5VWQ0 802 aaPredicted RBP14.38□□□□□ -0.11
GTF3A-204ENST00000438571 MEDAGQ5VYS4 303 aa14.38□□□□□ -0.11
GTF3A-204ENST00000438571 PARP16Q8N5Y8 322 aa14.38□□□□□ -0.11
GTF3A-204ENST00000438571 C5orf56Q8N8D9 126 aa14.38□□□□□ -0.11
GTF3A-204ENST00000438571 RFESDQ8TAC1 157 aa14.38□□□□□ -0.11
GTF3A-204ENST00000438571 MRGPRDQ8TDS7 321 aa14.38□□□□□ -0.11
GTF3A-204ENST00000438571 RPEQ96AT9 228 aa14.38□□□□□ -0.11
GTF3A-204ENST00000438571 RCC1LQ96I51 464 aaKnown RBP14.38□□□□□ -0.11
GTF3A-204ENST00000438571 IDI2-AS1Q9NZ38 188 aa14.38□□□□□ -0.11
GTF3A-204ENST00000438571 OR6C3Q9NZP0 311 aa14.38□□□□□ -0.11
GTF3A-204ENST00000438571 PSG11Q9UQ72 335 aa14.38□□□□□ -0.11
GTF3A-204ENST00000438571 OOSP1A8MZH6 123 aa14.37□□□□□ -0.11
GTF3A-204ENST00000438571 CIB2O75838 187 aa14.37□□□□□ -0.11
GTF3A-204ENST00000438571 IL1AP01583 271 aa14.37□□□□□ -0.11
GTF3A-204ENST00000438571 MTNR1BP49286 362 aa14.37□□□□□ -0.11
GTF3A-204ENST00000438571 RASSF2P50749 326 aa14.37□□□□□ -0.11
GTF3A-204ENST00000438571 ALDH3A2P51648 485 aa14.37□□□□□ -0.11
GTF3A-204ENST00000438571 GTF2A1P52655 376 aaPredicted RBP14.37□□□□□ -0.11
GTF3A-204ENST00000438571 FAM53AQ6NSI3 398 aaPredicted RBP14.37□□□□□ -0.11
GTF3A-204ENST00000438571 CCDC144NLQ6NUI1 221 aa14.37□□□□□ -0.11
GTF3A-204ENST00000438571 MRPL41Q8IXM3 137 aaKnown RBP14.37□□□□□ -0.11
GTF3A-204ENST00000438571 CNIH3Q8TBE1 160 aa14.37□□□□□ -0.11
GTF3A-204ENST00000438571 TNFAIP8L1Q8WVP5 186 aa14.37□□□□□ -0.11
GTF3A-204ENST00000438571 TSEN15Q8WW01 171 aaKnown RBP14.37□□□□□ -0.11
GTF3A-204ENST00000438571 CREB3L1Q96BA8 519 aa14.37□□□□□ -0.11
GTF3A-204ENST00000438571 RBMXL1Q96E39 390 aaKnown RBP14.37□□□□□ -0.11
GTF3A-204ENST00000438571 RHOFQ9HBH0 211 aa14.37□□□□□ -0.11
GTF3A-204ENST00000438571 ERVK13-1Q9NX77 482 aa14.37□□□□□ -0.11
GTF3A-204ENST00000438571 TAS2R4Q9NYW5 299 aa14.37□□□□□ -0.11
GTF3A-204ENST00000438571 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.37□□□□□ -0.11
GTF3A-204ENST00000438571 DHDHQ9UQ10 334 aa14.37□□□□□ -0.11
GTF3A-204ENST00000438571 SOX2P48431 317 aa14.36□□□□□ -0.11
GTF3A-204ENST00000438571 HES1Q14469 280 aa14.36□□□□□ -0.11
GTF3A-204ENST00000438571 HNF4GQ14541 408 aa14.36□□□□□ -0.11
GTF3A-204ENST00000438571 XAF1Q6GPH4 301 aa14.36□□□□□ -0.11
GTF3A-204ENST00000438571 ELP2Q6IA86 826 aa14.36□□□□□ -0.11
GTF3A-204ENST00000438571 C8orf86Q6ZUL3 223 aa14.36□□□□□ -0.11
GTF3A-204ENST00000438571 SATL1Q86VE3 508 aa14.36□□□□□ -0.11
GTF3A-204ENST00000438571 SERPINA12Q8IW75 414 aa14.36□□□□□ -0.11
GTF3A-204ENST00000438571 SYS1Q8N2H4 156 aa14.36□□□□□ -0.11
GTF3A-204ENST00000438571 CBR4Q8N4T8 237 aa14.36□□□□□ -0.11
GTF3A-204ENST00000438571 PXT1Q8NFP0 134 aa14.36□□□□□ -0.11
GTF3A-204ENST00000438571 OR5AK2Q8NH90 309 aa14.36□□□□□ -0.11
GTF3A-204ENST00000438571 UBALD1Q8TB05 177 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms