RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 ADAT3Q96EY9 351 aaPredicted RBP6.21□□□□□ -1.42
VPS50-204ENST00000438395 ZNF649Q9BS31 505 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 OSBPL10Q9BXB5 764 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 RHOFQ9HBH0 211 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 TAS2R3Q9NYW6 316 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 MOB4Q9Y3A3 225 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 HSPE1-MOB4S4R3N1 261 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 PSMB11A5LHX3 300 aa6.2□□□□□ -1.42
VPS50-204ENST00000438395 SAC3D1A6NKF1 404 aa6.2□□□□□ -1.42
VPS50-204ENST00000438395 HSPB6O14558 160 aa6.2□□□□□ -1.42
VPS50-204ENST00000438395 DEGS1O15121 323 aa6.2□□□□□ -1.42
VPS50-204ENST00000438395 SLC16A6O15403 523 aa6.2□□□□□ -1.42
VPS50-204ENST00000438395 MAGEB3O15480 346 aa6.2□□□□□ -1.42
VPS50-204ENST00000438395 CSN2P05814 226 aa6.2□□□□□ -1.42
VPS50-204ENST00000438395 DBTP11182 482 aaKnown RBP6.2□□□□□ -1.42
VPS50-204ENST00000438395 GDNFP39905 211 aa6.2□□□□□ -1.42
VPS50-204ENST00000438395 GLIPR1P48060 266 aa6.2□□□□□ -1.42
VPS50-204ENST00000438395 EFNB1P98172 346 aa6.2□□□□□ -1.42
VPS50-204ENST00000438395 AESQ08117 197 aa6.2□□□□□ -1.42
VPS50-204ENST00000438395 MADCAM1Q13477 382 aa6.2□□□□□ -1.42
VPS50-204ENST00000438395 HES1Q14469 280 aa6.2□□□□□ -1.42
VPS50-204ENST00000438395 ATXN7L3Q14CW9 347 aaPredicted RBP6.2□□□□□ -1.42
VPS50-204ENST00000438395 HLA-DRB5Q30154 266 aa6.2□□□□□ -1.42
VPS50-204ENST00000438395 PAN3Q58A45 887 aaKnown RBP6.2□□□□□ -1.42
VPS50-204ENST00000438395 DEFB121Q5J5C9 76 aa6.2□□□□□ -1.42
VPS50-204ENST00000438395 TPTE2P1Q5T6R2 138 aa6.2□□□□□ -1.42
VPS50-204ENST00000438395 SAXO1Q8IYX7 474 aa6.2□□□□□ -1.42
VPS50-204ENST00000438395 WIPF2Q8TF74 440 aaPredicted RBP6.2□□□□□ -1.42
VPS50-204ENST00000438395 TSEN15Q8WW01 171 aaKnown RBP6.2□□□□□ -1.42
VPS50-204ENST00000438395 EME1Q96AY2 570 aa6.2□□□□□ -1.42
VPS50-204ENST00000438395 SLC7A6OSQ96CW6 309 aaPredicted RBP6.2□□□□□ -1.42
VPS50-204ENST00000438395 RNFT2Q96EX2 444 aa6.2□□□□□ -1.42
VPS50-204ENST00000438395 CENPNQ96H22 339 aaPredicted RBP6.2□□□□□ -1.42
VPS50-204ENST00000438395 RBM14Q96PK6 669 aaKnown RBP6.2□□□□□ -1.42
VPS50-204ENST00000438395 SPACA5Q96QH8 159 aa6.2□□□□□ -1.42
VPS50-204ENST00000438395 GPER1Q99527 375 aa6.2□□□□□ -1.42
VPS50-204ENST00000438395 GABARAPL3Q9BY60 117 aa6.2□□□□□ -1.42
VPS50-204ENST00000438395 COMMD4Q9H0A8 199 aa6.2□□□□□ -1.42
VPS50-204ENST00000438395 ZMAT5Q9UDW3 170 aaKnown RBP6.2□□□□□ -1.42
VPS50-204ENST00000438395 OAZ3Q9UMX2 235 aa6.2□□□□□ -1.42
VPS50-204ENST00000438395 PLXNB1O43157 2135 aa6.2□□□□□ -1.42
VPS50-204ENST00000438395 MEIKINA0A087WXM9 373 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 IGKV1-9A0A0C4DH69 117 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 DBX1A6NMT0 343 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 ZNF729A6NN14 1252 aaPredicted RBP6.19□□□□□ -1.42
VPS50-204ENST00000438395 BUB1B-PAK6H3BSN5 160 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 J3QLW9 94 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 MMP23AO75900 390 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 KDM4BO94953 1096 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 MT-ND2P03891 347 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 ISG15P05161 165 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 ZNF19P17023 458 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 CD34P28906 385 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 C21orf33P30042 268 aaPredicted RBP6.19□□□□□ -1.42
VPS50-204ENST00000438395 SLC35B1P78383 322 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 ZNF85Q03923 595 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 CD69Q07108 199 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 VAX1Q5SQQ9 334 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 MEDAGQ5VYS4 303 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 LPCAT4Q643R3 524 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 UNQ9370/PRO34162Q6UXP9 181 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 OSR2Q8N2R0 312 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 ACBD7Q8N6N7 88 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 ZNF565Q8N9K5 539 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 WFDC9Q8NEX5 89 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 OR5D14Q8NGL3 314 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 OR10X1Q8NGY0 326 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 OR56B4Q8NH76 319 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 OR9G1Q8NH87 305 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 TRUB1Q8WWH5 349 aaKnown RBP6.19□□□□□ -1.42
VPS50-204ENST00000438395 C4orf36Q96KX1 117 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 MBOAT4Q96T53 435 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 MCRIP2Q9BUT9 160 aaKnown RBP6.19□□□□□ -1.42
VPS50-204ENST00000438395 BARHL1Q9BZE3 327 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 FAM192AQ9GZU8 254 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 ZCCHC4Q9H5U6 513 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 ZNF286AQ9HBT8 521 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 ADAM30Q9UKF2 790 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 DHDHQ9UQ10 334 aa6.19□□□□□ -1.42
VPS50-204ENST00000438395 KBTBD11-OT1A0A1B0GTJ5 212 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 SH2D7A6NKC9 451 aaPredicted RBP6.18□□□□□ -1.42
VPS50-204ENST00000438395 TMEM212A6NML5 194 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 SERPINE3A8MV23 424 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 H0YJX3 145 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 SLC33A1O00400 549 aaPredicted RBP6.18□□□□□ -1.42
VPS50-204ENST00000438395 SULT1B1O43704 296 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 ATP5HO75947 161 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 BPNT1O95861 308 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 FADS2O95864 444 aaKnown RBP6.18□□□□□ -1.42
VPS50-204ENST00000438395 IGLV1-47P01700 117 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 CD2P06729 351 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 CCDC159P0C7I6 412 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 TMEM11P17152 192 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 RAB3AP20336 220 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 SLC6A1P30531 599 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 POLR2IP36954 125 aaKnown RBP6.18□□□□□ -1.42
VPS50-204ENST00000438395 MTNR1BP49286 362 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 CCR9P51686 369 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 ISL1P61371 349 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 MRPL28Q13084 256 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms