RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 OR2J1Q9GZK6 312 aa6.52□□□□□ -1.37
CPSF6-202ENST00000435070 SRD5A3Q9H8P0 318 aa6.52□□□□□ -1.37
CPSF6-202ENST00000435070 SERGEFQ9UGK8 458 aa6.52□□□□□ -1.37
CPSF6-202ENST00000435070 MCTS1Q9ULC4 181 aaKnown RBP6.52□□□□□ -1.37
CPSF6-202ENST00000435070 A0A1W2PNV4 684 aa6.52□□□□□ -1.37
CPSF6-202ENST00000435070 ACTL6BO94805 426 aa6.52□□□□□ -1.37
CPSF6-202ENST00000435070 CEACAM8P31997 349 aaPredicted RBP6.52□□□□□ -1.37
CPSF6-202ENST00000435070 RPL24P83731 157 aaKnown RBP6.52□□□□□ -1.37
CPSF6-202ENST00000435070 TLE4Q04727 773 aa6.52□□□□□ -1.37
CPSF6-202ENST00000435070 ZNF154Q13106 437 aa6.52□□□□□ -1.37
CPSF6-202ENST00000435070 PDCD1Q15116 288 aa6.52□□□□□ -1.37
CPSF6-202ENST00000435070 TMEM31Q5JXX7 168 aa6.52□□□□□ -1.37
CPSF6-202ENST00000435070 CTHRC1Q96CG8 243 aa6.52□□□□□ -1.37
CPSF6-202ENST00000435070 RCC1LQ96I51 464 aaKnown RBP6.52□□□□□ -1.37
CPSF6-202ENST00000435070 SMIM7Q9BQ49 75 aa6.52□□□□□ -1.37
CPSF6-202ENST00000435070 ZNF286AQ9HBT8 521 aa6.52□□□□□ -1.37
CPSF6-202ENST00000435070 PLEKHJ1Q9NW61 149 aa6.52□□□□□ -1.37
CPSF6-202ENST00000435070 VAX2Q9UIW0 290 aa6.52□□□□□ -1.37
CPSF6-202ENST00000435070 NKX2-6A6NCS4 301 aa6.52□□□□□ -1.37
CPSF6-202ENST00000435070 OPN1LWP04000 364 aa6.52□□□□□ -1.37
CPSF6-202ENST00000435070 ANOS1P23352 680 aa6.52□□□□□ -1.37
CPSF6-202ENST00000435070 CSNK1A1P48729 337 aa6.52□□□□□ -1.37
CPSF6-202ENST00000435070 CXorf66Q5JRM2 361 aaPredicted RBP6.52□□□□□ -1.37
CPSF6-202ENST00000435070 Q5PR19 223 aa6.52□□□□□ -1.37
CPSF6-202ENST00000435070 VHLLQ6RSH7 139 aa6.52□□□□□ -1.37
CPSF6-202ENST00000435070 SFTPA2Q8IWL1 248 aa6.52□□□□□ -1.37
CPSF6-202ENST00000435070 THAP10Q9P2Z0 257 aaPredicted RBP6.52□□□□□ -1.37
CPSF6-202ENST00000435070 CRYM-AS1A6NIL9 109 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 HSPB2A8KAH6 182 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 TGFBR3LH3BV60 316 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 NUPR1O60356 82 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 ZNF728P0DKX0 622 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 DUSP1P28562 367 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 GALR1P47211 349 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 PRSS12P56730 875 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 FAM3BP58499 235 aaPredicted RBP6.51□□□□□ -1.37
CPSF6-202ENST00000435070 HSPB2Q16082 182 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 BATF2Q8N1L9 274 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 CA13Q8N1Q1 262 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 GCM1Q9NP62 436 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 GPR84Q9NQS5 396 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 TRBV24-1A0A075B6N3 115 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 TMEM210A6NLX4 147 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 CEACAM18A8MTB9 384 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 H3BML4 177 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 DDAH2O95865 285 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 ZNF43P17038 809 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 TMEM11P17152 192 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 ZNF92Q03936 586 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 PHYHD1Q5SRE7 291 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 BAGE3Q86Y29 109 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 BAGE2Q86Y30 109 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 SLAMF6Q96DU3 332 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 SGCZQ96LD1 299 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 RSG1Q9BU20 258 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 TWSG1Q9GZX9 223 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 SMDT1Q9H4I9 107 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 ZNF581Q9P0T4 197 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 URB1O60287 2271 aaKnown RBP6.51□□□□□ -1.37
CPSF6-202ENST00000435070 SLC35E2P0CK97 266 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 VIPR2P41587 438 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 ENDOGQ14249 297 aaKnown RBP6.51□□□□□ -1.37
CPSF6-202ENST00000435070 DEFB133Q30KQ1 61 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 ERASQ7Z444 233 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 NOXO1Q8NFA2 376 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 HOXB13Q92826 284 aaPredicted RBP6.51□□□□□ -1.37
CPSF6-202ENST00000435070 LRRC3BQ96PB8 259 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 FGF22Q9HCT0 170 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 IL23AQ9NPF7 189 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 CEACAM5P06731 702 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 PPP1CAP62136 330 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 FOXF1Q12946 379 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 ZNF787Q6DD87 383 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 CNEP1R1Q8N9A8 125 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 OR1L6Q8NGR2 347 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 PIGTQ969N2 578 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 BOD1Q96IK1 185 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 TP53RKQ96S44 253 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 ZFYVE21Q9BQ24 234 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 GLRX2Q9NS18 164 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 YTHDF2Q9Y5A9 579 aaKnown RBP6.51□□□□□ -1.37
CPSF6-202ENST00000435070 A0A1W2PQU0 124 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 SMIM10L1P0DMW3 83 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 RND2P52198 227 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 MMDQ15546 238 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 SLC25A26Q70HW3 274 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 TMEM252Q8N6L7 170 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 VN1R17PQ8TDU5 208 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 SMIM10Q96HG1 83 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 OR10A5Q9H207 317 aa6.51□□□□□ -1.37
CPSF6-202ENST00000435070 GRIFINA4D1Z8 144 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 CSF2RAP15509 400 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 NKX2-1P43699 371 aaPredicted RBP6.5□□□□□ -1.37
CPSF6-202ENST00000435070 SSPNQ14714 243 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 ABHD17BQ5VST6 288 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 OR5AS1Q8N127 324 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 PECRQ9BY49 303 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 NAA60Q9H7X0 242 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 SDF2L1Q9HCN8 221 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 SZT2Q5T011 3432 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms