RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 AADACL3Q5VUY0 350 aa13.44□□□□□ -0.26
SCARF1-203ENST00000434376 LYZL2Q7Z4W2 148 aa13.44□□□□□ -0.26
SCARF1-203ENST00000434376 OSR2Q8N2R0 312 aa13.44□□□□□ -0.26
SCARF1-203ENST00000434376 ZNF565Q8N9K5 539 aa13.44□□□□□ -0.26
SCARF1-203ENST00000434376 TMEM9BQ9NQ34 198 aa13.44□□□□□ -0.26
SCARF1-203ENST00000434376 RFNGQ9Y644 331 aa13.44□□□□□ -0.26
SCARF1-203ENST00000434376 B4E171 279 aa13.43□□□□□ -0.26
SCARF1-203ENST00000434376 K7EPK0 472 aa13.43□□□□□ -0.26
SCARF1-203ENST00000434376 H2AFB1P0C5Y9 115 aa13.43□□□□□ -0.26
SCARF1-203ENST00000434376 FAM157CP0CG43 387 aa13.43□□□□□ -0.26
SCARF1-203ENST00000434376 TSPAN7P41732 249 aa13.43□□□□□ -0.26
SCARF1-203ENST00000434376 SLC10A1Q14973 349 aa13.43□□□□□ -0.26
SCARF1-203ENST00000434376 MIDNQ504T8 468 aa13.43□□□□□ -0.26
SCARF1-203ENST00000434376 NSUN5P2Q63ZY6 315 aa13.43□□□□□ -0.26
SCARF1-203ENST00000434376 FAM71E2Q8N5Q1 922 aa13.43□□□□□ -0.26
SCARF1-203ENST00000434376 RNF138Q8WVD3 245 aa13.43□□□□□ -0.26
SCARF1-203ENST00000434376 EMG1Q92979 244 aaKnown RBP13.43□□□□□ -0.26
SCARF1-203ENST00000434376 ZNF703Q9H7S9 590 aaPredicted RBP13.43□□□□□ -0.26
SCARF1-203ENST00000434376 GPR132Q9UNW8 380 aa13.43□□□□□ -0.26
SCARF1-203ENST00000434376 H3BP45 60 aa13.43□□□□□ -0.26
SCARF1-203ENST00000434376 CAMLGP49069 296 aa13.43□□□□□ -0.26
SCARF1-203ENST00000434376 SOX8P57073 446 aa13.43□□□□□ -0.26
SCARF1-203ENST00000434376 MALLQ13021 153 aa13.43□□□□□ -0.26
SCARF1-203ENST00000434376 PRDX4Q13162 271 aa13.43□□□□□ -0.26
SCARF1-203ENST00000434376 RPUSD3Q6P087 351 aaKnown RBP13.43□□□□□ -0.26
SCARF1-203ENST00000434376 CRIP3Q6Q6R5 217 aa13.43□□□□□ -0.26
SCARF1-203ENST00000434376 IL34Q6ZMJ4 242 aa13.43□□□□□ -0.26
SCARF1-203ENST00000434376 SGPP2Q8IWX5 399 aa13.43□□□□□ -0.26
SCARF1-203ENST00000434376 OR51H1Q8NH63 302 aa13.43□□□□□ -0.26
SCARF1-203ENST00000434376 ADAMTS20P59510 1910 aa13.43□□□□□ -0.26
SCARF1-203ENST00000434376 CNOT4O95628 575 aaKnown RBP13.42□□□□□ -0.26
SCARF1-203ENST00000434376 CEBPDP49716 269 aaPredicted RBP13.42□□□□□ -0.26
SCARF1-203ENST00000434376 HERV-K104P61576 105 aa13.42□□□□□ -0.26
SCARF1-203ENST00000434376 TLE1Q04724 770 aa13.42□□□□□ -0.26
SCARF1-203ENST00000434376 CNN3Q15417 329 aaKnown RBP13.42□□□□□ -0.26
SCARF1-203ENST00000434376 ADPRHL1Q8NDY3 354 aa13.42□□□□□ -0.26
SCARF1-203ENST00000434376 RNASE11Q8TAA1 199 aaKnown RBP13.42□□□□□ -0.26
SCARF1-203ENST00000434376 TCTEX1D2Q8WW35 142 aa13.42□□□□□ -0.26
SCARF1-203ENST00000434376 TMEM127O75204 238 aa13.42□□□□□ -0.26
SCARF1-203ENST00000434376 OR2B11Q5JQS5 317 aa13.42□□□□□ -0.26
SCARF1-203ENST00000434376 VHLLQ6RSH7 139 aa13.42□□□□□ -0.26
SCARF1-203ENST00000434376 ZDHHC22Q8N966 263 aa13.42□□□□□ -0.26
SCARF1-203ENST00000434376 KCNE4Q8WWG9 221 aa13.42□□□□□ -0.26
SCARF1-203ENST00000434376 RTN4IP1Q8WWV3 396 aaPredicted RBP13.42□□□□□ -0.26
SCARF1-203ENST00000434376 TRIB1Q96RU8 372 aa13.42□□□□□ -0.26
SCARF1-203ENST00000434376 SPG11Q96JI7 2443 aa13.42□□□□□ -0.26
SCARF1-203ENST00000434376 S100A8P05109 93 aa13.42□□□□□ -0.26
SCARF1-203ENST00000434376 SMIM6P0DI80 62 aa13.42□□□□□ -0.26
SCARF1-203ENST00000434376 ZNF728P0DKX0 622 aa13.42□□□□□ -0.26
SCARF1-203ENST00000434376 NDUFA6P56556 154 aa13.42□□□□□ -0.26
SCARF1-203ENST00000434376 CLN3Q13286 438 aa13.42□□□□□ -0.26
SCARF1-203ENST00000434376 TMEM217Q8N7C4 229 aa13.42□□□□□ -0.26
SCARF1-203ENST00000434376 S100PBPQ96BU1 408 aa13.42□□□□□ -0.26
SCARF1-203ENST00000434376 FBXL17Q9UF56 701 aa13.42□□□□□ -0.26
SCARF1-203ENST00000434376 ANXA10Q9UJ72 324 aa13.42□□□□□ -0.26
SCARF1-203ENST00000434376 H7C1Q1 480 aa13.41□□□□□ -0.26
SCARF1-203ENST00000434376 SIRPB1O00241 398 aa13.41□□□□□ -0.26
SCARF1-203ENST00000434376 RHBDL1O75783 438 aa13.41□□□□□ -0.26
SCARF1-203ENST00000434376 SCTP09683 121 aa13.41□□□□□ -0.26
SCARF1-203ENST00000434376 PRF1P14222 555 aa13.41□□□□□ -0.26
SCARF1-203ENST00000434376 RPL12P30050 165 aaKnown RBP13.41□□□□□ -0.26
SCARF1-203ENST00000434376 LHX2P50458 406 aa13.41□□□□□ -0.26
SCARF1-203ENST00000434376 RPS16P62249 146 aaKnown RBP13.41□□□□□ -0.26
SCARF1-203ENST00000434376 RCL1Q9Y2P8 373 aaKnown RBP13.41□□□□□ -0.26
SCARF1-203ENST00000434376 ARHGAP21Q5T5U3 1957 aa13.41□□□□□ -0.26
SCARF1-203ENST00000434376 LOC102725191A0A1B0GVB3 256 aa13.41□□□□□ -0.26
SCARF1-203ENST00000434376 UMAD1C9J7I0 102 aa13.41□□□□□ -0.26
SCARF1-203ENST00000434376 CLN5O75503 358 aa13.41□□□□□ -0.26
SCARF1-203ENST00000434376 ONECUT2O95948 504 aa13.41□□□□□ -0.26
SCARF1-203ENST00000434376 HOXA6P31267 233 aa13.41□□□□□ -0.26
SCARF1-203ENST00000434376 RAB2AP61019 212 aa13.41□□□□□ -0.26
SCARF1-203ENST00000434376 DEFB109BQ30KR1 87 aa13.41□□□□□ -0.26
SCARF1-203ENST00000434376 PRSS54Q6PEW0 395 aa13.41□□□□□ -0.26
SCARF1-203ENST00000434376 SH2D2AQ9NP31 389 aa13.41□□□□□ -0.26
SCARF1-203ENST00000434376 A0A0U1RQV5 110 aa13.41□□□□□ -0.26
SCARF1-203ENST00000434376 HSPA12AO43301 675 aa13.41□□□□□ -0.26
SCARF1-203ENST00000434376 CRYGSP22914 178 aa13.41□□□□□ -0.26
SCARF1-203ENST00000434376 GFRA1P56159 465 aa13.41□□□□□ -0.26
SCARF1-203ENST00000434376 ZNF529Q6P280 563 aa13.41□□□□□ -0.26
SCARF1-203ENST00000434376 ZNF600Q6ZNG1 722 aa13.41□□□□□ -0.26
SCARF1-203ENST00000434376 ZNF561Q8N587 486 aa13.41□□□□□ -0.26
SCARF1-203ENST00000434376 BSCL2Q96G97 398 aaPredicted RBP13.41□□□□□ -0.26
SCARF1-203ENST00000434376 OR6C6A6NF89 314 aa13.4□□□□□ -0.26
SCARF1-203ENST00000434376 MSTNO14793 375 aa13.4□□□□□ -0.26
SCARF1-203ENST00000434376 SFT2D2O95562 160 aa13.4□□□□□ -0.26
SCARF1-203ENST00000434376 GNRHRP30968 328 aa13.4□□□□□ -0.26
SCARF1-203ENST00000434376 FABP6P51161 128 aa13.4□□□□□ -0.26
SCARF1-203ENST00000434376 TAS2R31P59538 309 aa13.4□□□□□ -0.26
SCARF1-203ENST00000434376 TAS2R46P59540 309 aa13.4□□□□□ -0.26
SCARF1-203ENST00000434376 FAM53AQ6NSI3 398 aaPredicted RBP13.4□□□□□ -0.26
SCARF1-203ENST00000434376 TPRX1Q8N7U7 411 aa13.4□□□□□ -0.26
SCARF1-203ENST00000434376 RHOVQ96L33 236 aa13.4□□□□□ -0.26
SCARF1-203ENST00000434376 Q96M66 194 aa13.4□□□□□ -0.26
SCARF1-203ENST00000434376 MELTFP08582 738 aa13.4□□□□□ -0.26
SCARF1-203ENST00000434376 GLP1RP43220 463 aa13.4□□□□□ -0.26
SCARF1-203ENST00000434376 CLDN18P56856 261 aa13.4□□□□□ -0.26
SCARF1-203ENST00000434376 FBXW12Q6X9E4 464 aa13.4□□□□□ -0.26
SCARF1-203ENST00000434376 EXTL1Q92935 676 aa13.4□□□□□ -0.26
SCARF1-203ENST00000434376 FIGNL2A6NMB9 653 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 IL2RAP01589 272 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms