RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 NCMAPQ5T1S8 102 aa7□□□□□ -1.29
VTI1A-202ENST00000432306 Q6ZSR3 168 aa7□□□□□ -1.29
VTI1A-202ENST00000432306 SEM1Q6ZVN7 128 aa7□□□□□ -1.29
VTI1A-202ENST00000432306 SLC16A14Q7RTX9 510 aa7□□□□□ -1.29
VTI1A-202ENST00000432306 OR5AS1Q8N127 324 aa7□□□□□ -1.29
VTI1A-202ENST00000432306 FNDC9Q8TBE3 224 aa7□□□□□ -1.29
VTI1A-202ENST00000432306 FGGYQ96C11 551 aa7□□□□□ -1.29
VTI1A-202ENST00000432306 WDR92Q96MX6 357 aa7□□□□□ -1.29
VTI1A-202ENST00000432306 NKX3-1Q99801 234 aaPredicted RBP7□□□□□ -1.29
VTI1A-202ENST00000432306 SYT3Q9BQG1 590 aa7□□□□□ -1.29
VTI1A-202ENST00000432306 NICN1Q9BSH3 213 aa7□□□□□ -1.29
VTI1A-202ENST00000432306 URM1Q9BTM9 101 aaKnown RBP7□□□□□ -1.29
VTI1A-202ENST00000432306 PTGES2Q9H7Z7 377 aa7□□□□□ -1.29
VTI1A-202ENST00000432306 LANCL2Q9NS86 450 aa7□□□□□ -1.29
VTI1A-202ENST00000432306 ABI3Q9P2A4 366 aa7□□□□□ -1.29
VTI1A-202ENST00000432306 PILRBQ9UKJ0 227 aa7□□□□□ -1.29
VTI1A-202ENST00000432306 MMP17Q9ULZ9 603 aa7□□□□□ -1.29
VTI1A-202ENST00000432306 SMG1Q96Q15 3661 aaKnown RBP7□□□□□ -1.29
VTI1A-202ENST00000432306 WDFY3Q8IZQ1 3526 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 CABIN1Q9Y6J0 2220 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 B4DEV8 164 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 AGPAT2O15120 278 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 SLC31A2O15432 143 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 LMX1BO60663 402 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 RAD51DO75771 328 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 ZNF205O95201 554 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 ZNF823P16415 610 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 PGCP20142 388 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 CCNOP22674 350 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 RBMXP38159 391 aaKnown RBP6.99□□□□□ -1.29
VTI1A-202ENST00000432306 AKR1C3P42330 323 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 CNN1P51911 297 aaKnown RBP6.99□□□□□ -1.29
VTI1A-202ENST00000432306 POLR2HP52434 150 aaKnown RBP6.99□□□□□ -1.29
VTI1A-202ENST00000432306 SLC37A1P57057 533 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 OR2B8PP59922 312 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 SPCS3P61009 180 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 MRPS21P82921 87 aaKnown RBP6.99□□□□□ -1.29
VTI1A-202ENST00000432306 ELOBQ15370 118 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 TGIF1Q15583 401 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 SSX9Q7RTT3 188 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 MARCH3Q86UD3 253 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 LRRC75A-AS1Q8N1F1 130 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 HIST3H2BBQ8N257 126 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 ZNF383Q8NA42 475 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 BEND2Q8NDZ0 799 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 RNASEH2CQ8TDP1 164 aaKnown RBP6.99□□□□□ -1.29
VTI1A-202ENST00000432306 ASB10Q8WXI3 467 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 NTNG2Q96CW9 530 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 MARS2Q96GW9 593 aaKnown RBP6.99□□□□□ -1.29
VTI1A-202ENST00000432306 WDR77Q9BQA1 342 aaPredicted RBP6.99□□□□□ -1.29
VTI1A-202ENST00000432306 TMEM59Q9BXS4 323 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 C11orf1Q9H5F2 150 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 GEMIN7Q9H840 131 aaKnown RBP6.99□□□□□ -1.29
VTI1A-202ENST00000432306 HIF1ANQ9NWT6 349 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 KIAA1456Q9P272 454 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 C14orf166Q9Y224 244 aaKnown RBP6.99□□□□□ -1.29
VTI1A-202ENST00000432306 COL6A6A6NMZ7 2263 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 CPAMD8Q8IZJ3 1885 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 TRPM6Q9BX84 2022 aa6.99□□□□□ -1.29
VTI1A-202ENST00000432306 C10orf142B7Z368 130 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 H7C1Q1 480 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 P2RY10O00398 339 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 PHOX2AO14813 284 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 SOCS1O15524 211 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 HCRTR1O43613 425 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 TLX3O43711 291 aaPredicted RBP6.98□□□□□ -1.29
VTI1A-202ENST00000432306 HIST1H2BKO60814 126 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 IFNA21P01568 189 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 IGLV3-1P01715 115 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 IGKV3-11P04433 115 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 HSPB1P04792 205 aaKnown RBP6.98□□□□□ -1.29
VTI1A-202ENST00000432306 ARG1P05089 322 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 HIST1H2BJP06899 126 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 H2BFMP0C1H6 154 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 CD59P13987 128 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 HIST1H2BOP23527 126 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 HIST1H2BBP33778 126 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 APOBEC1P41238 236 aaKnown RBP6.98□□□□□ -1.29
VTI1A-202ENST00000432306 DAP3P51398 398 aaKnown RBP6.98□□□□□ -1.29
VTI1A-202ENST00000432306 RND2P52198 227 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 FAM3BP58499 235 aaPredicted RBP6.98□□□□□ -1.29
VTI1A-202ENST00000432306 HIST1H2BDP58876 126 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 S100A10P60903 97 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 HIST1H2BCP62807 126 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 HIST2H2BEQ16778 126 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 SOHLH1Q5JUK2 328 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.98□□□□□ -1.29
VTI1A-202ENST00000432306 GGNBP1Q5YKI7 109 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 GLIPR1L1Q6UWM5 242 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 GRINAQ7Z429 371 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 SLC35E3Q7Z769 313 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 SGPP2Q8IWX5 399 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 ZNF101Q8IZC7 436 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 TMEM104Q8NE00 496 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 RNASE11Q8TAA1 199 aaKnown RBP6.98□□□□□ -1.29
VTI1A-202ENST00000432306 HIST1H2BHQ93079 126 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 ERGIC1Q969X5 290 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 ADIPOR1Q96A54 375 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 ABHD14BQ96IU4 210 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms