RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 STOML3Q8TAV4 291 aa10.95□□□□□ -0.66
DDX56-204ENST00000431640 MARS2Q96GW9 593 aaKnown RBP10.95□□□□□ -0.66
DDX56-204ENST00000431640 AQP10Q96PS8 301 aa10.95□□□□□ -0.66
DDX56-204ENST00000431640 DNTTIP1Q9H147 329 aa10.95□□□□□ -0.66
DDX56-204ENST00000431640 CRIM1Q9NZV1 1036 aa10.95□□□□□ -0.66
DDX56-204ENST00000431640 GSKIPQ9P0R6 139 aa10.95□□□□□ -0.66
DDX56-204ENST00000431640 FBXO9Q9UK97 447 aaPredicted RBP10.95□□□□□ -0.66
DDX56-204ENST00000431640 POLDIP2Q9Y2S7 368 aa10.95□□□□□ -0.66
DDX56-204ENST00000431640 H0YIZ8 118 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 SYNGR1O43759 233 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 SMPD2O60906 423 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 PPYP01298 95 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 KIR2DL2P43627 348 aaPredicted RBP10.94□□□□□ -0.66
DDX56-204ENST00000431640 TDGF1P3P51864 188 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 FXYD4P59646 89 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 RAB32Q13637 225 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 LIAT1Q6ZQX7 453 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 HSD17B13Q7Z5P4 300 aaPredicted RBP10.94□□□□□ -0.66
DDX56-204ENST00000431640 LGI3Q8N145 548 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 C17orf78Q8N4C9 275 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 EIF4E3Q8N5X7 224 aaKnown RBP10.94□□□□□ -0.66
DDX56-204ENST00000431640 CNEP1R1Q8N9A8 125 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 NEK7Q8TDX7 302 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 REG4Q9BYZ8 158 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 SHARPINQ9H0F6 387 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 OBP2BQ9NPH6 170 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 SLC2A9Q9NRM0 540 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 PRR13Q9NZ81 148 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 ATP23Q9Y6H3 246 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 KALRNO60229 2985 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 PIGBOS1A0A0B4J2F0 54 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 TMEM210A6NLX4 147 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 IQCF6A8MYZ5 107 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 KRBOX1C9JBD0 128 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 DEGS1O15121 323 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 LYZL6O75951 148 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 ACAA1P09110 424 aaPredicted RBP10.94□□□□□ -0.66
DDX56-204ENST00000431640 COX5AP20674 150 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 AADACP22760 399 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 MDH2P40926 338 aaKnown RBP10.94□□□□□ -0.66
DDX56-204ENST00000431640 IDH3GP51553 393 aaPredicted RBP10.94□□□□□ -0.66
DDX56-204ENST00000431640 SNTB1Q13884 538 aaKnown RBP10.94□□□□□ -0.66
DDX56-204ENST00000431640 GGNBP1Q5YKI7 109 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 GCNT2Q8N0V5 402 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 ZNF565Q8N9K5 539 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 SUMF2Q8NBJ7 301 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 OR5T2Q8NGG2 359 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 OR1S1Q8NH92 325 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 OR51B6Q9H340 312 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 TREM2Q9NZC2 230 aa10.94□□□□□ -0.66
DDX56-204ENST00000431640 IGSF10Q6WRI0 2623 aa10.93□□□□□ -0.66
DDX56-204ENST00000431640 MPTX1A8MV57 137 aa10.93□□□□□ -0.66
DDX56-204ENST00000431640 IGKV3-15P01624 115 aa10.93□□□□□ -0.66
DDX56-204ENST00000431640 OR5AC1P0C628 307 aa10.93□□□□□ -0.66
DDX56-204ENST00000431640 RND3P61587 244 aa10.93□□□□□ -0.66
DDX56-204ENST00000431640 P2RY6Q15077 328 aa10.93□□□□□ -0.66
DDX56-204ENST00000431640 ACSF3Q4G176 576 aaPredicted RBP10.93□□□□□ -0.66
DDX56-204ENST00000431640 BAP18Q8IXM2 172 aa10.93□□□□□ -0.66
DDX56-204ENST00000431640 CISD2Q8N5K1 135 aaKnown RBP10.93□□□□□ -0.66
DDX56-204ENST00000431640 C9orf106Q8NAJ2 232 aa10.93□□□□□ -0.66
DDX56-204ENST00000431640 OR1J1Q8NGS3 322 aa10.93□□□□□ -0.66
DDX56-204ENST00000431640 SNRNP40Q96DI7 357 aaKnown RBP10.93□□□□□ -0.66
DDX56-204ENST00000431640 C18orf12Q96KH6 178 aa10.93□□□□□ -0.66
DDX56-204ENST00000431640 CXorf58Q96LI9 332 aa10.93□□□□□ -0.66
DDX56-204ENST00000431640 OR2J1Q9GZK6 312 aa10.93□□□□□ -0.66
DDX56-204ENST00000431640 PCDHB10Q9UN67 800 aa10.93□□□□□ -0.66
DDX56-204ENST00000431640 TMED3Q9Y3Q3 217 aa10.93□□□□□ -0.66
DDX56-204ENST00000431640 MED12LQ86YW9 2145 aa10.92□□□□□ -0.66
DDX56-204ENST00000431640 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.92□□□□□ -0.66
DDX56-204ENST00000431640 MPPED1O15442 326 aa10.92□□□□□ -0.66
DDX56-204ENST00000431640 LILRA1O75019 489 aa10.92□□□□□ -0.66
DDX56-204ENST00000431640 FGF2P09038 288 aa10.92□□□□□ -0.66
DDX56-204ENST00000431640 S100GP29377 79 aa10.92□□□□□ -0.66
DDX56-204ENST00000431640 S100A10P60903 97 aa10.92□□□□□ -0.66
DDX56-204ENST00000431640 EIF2S3LQ2VIR3 472 aaKnown RBP10.92□□□□□ -0.66
DDX56-204ENST00000431640 IGSF11Q5DX21 431 aa10.92□□□□□ -0.66
DDX56-204ENST00000431640 SPATA46Q5T0L3 261 aa10.92□□□□□ -0.66
DDX56-204ENST00000431640 SHEQ5VZ18 495 aa10.92□□□□□ -0.66
DDX56-204ENST00000431640 EIF5AL1Q6IS14 154 aaKnown RBP10.92□□□□□ -0.66
DDX56-204ENST00000431640 BATF2Q8N1L9 274 aa10.92□□□□□ -0.66
DDX56-204ENST00000431640 OR4A4PQ8NGN8 299 aa10.92□□□□□ -0.66
DDX56-204ENST00000431640 SLC25A40Q8TBP6 338 aa10.92□□□□□ -0.66
DDX56-204ENST00000431640 RRNAD1Q96FB5 475 aaKnown RBP10.92□□□□□ -0.66
DDX56-204ENST00000431640 HS3ST6Q96QI5 342 aa10.92□□□□□ -0.66
DDX56-204ENST00000431640 SLX1AQ9BQ83 275 aa10.92□□□□□ -0.66
DDX56-204ENST00000431640 PLEKHA2Q9HB19 425 aa10.92□□□□□ -0.66
DDX56-204ENST00000431640 OR5AC2Q9NZP5 309 aa10.92□□□□□ -0.66
DDX56-204ENST00000431640 NUP50Q9UKX7 468 aa10.92□□□□□ -0.66
DDX56-204ENST00000431640 PROCRQ9UNN8 238 aa10.92□□□□□ -0.66
DDX56-204ENST00000431640 C3orf85A0A1B0GTC6 90 aa10.91□□□□□ -0.66
DDX56-204ENST00000431640 A8MXK9 166 aa10.91□□□□□ -0.66
DDX56-204ENST00000431640 GPR31O00270 319 aa10.91□□□□□ -0.66
DDX56-204ENST00000431640 HS3ST1O14792 307 aa10.91□□□□□ -0.66
DDX56-204ENST00000431640 DEDDO75618 318 aa10.91□□□□□ -0.66
DDX56-204ENST00000431640 CELA3BP08861 270 aa10.91□□□□□ -0.66
DDX56-204ENST00000431640 ZP3P21754 424 aa10.91□□□□□ -0.66
DDX56-204ENST00000431640 DUSP1P28562 367 aa10.91□□□□□ -0.66
DDX56-204ENST00000431640 PHLDA2Q53GA4 152 aa10.91□□□□□ -0.66
DDX56-204ENST00000431640 ZNF880Q6PDB4 577 aa10.91□□□□□ -0.66
DDX56-204ENST00000431640 FIP1L1Q6UN15 594 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms