RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 NXNL2Q5VZ03 156 aa17.27■□□□□ 0.36
PTPRA-207ENST00000431048 ZNF565Q8N9K5 539 aa17.27■□□□□ 0.36
PTPRA-207ENST00000431048 C4orf3Q8WVX3 66 aa17.27■□□□□ 0.36
PTPRA-207ENST00000431048 DNAJC9Q8WXX5 260 aa17.27■□□□□ 0.36
PTPRA-207ENST00000431048 CITED4Q96RK1 184 aa17.27■□□□□ 0.36
PTPRA-207ENST00000431048 LIN7CQ9NUP9 197 aaKnown RBP17.27■□□□□ 0.36
PTPRA-207ENST00000431048 PSG11Q9UQ72 335 aa17.27■□□□□ 0.36
PTPRA-207ENST00000431048 METTL15A6NJ78 407 aa17.26■□□□□ 0.35
PTPRA-207ENST00000431048 SLC33A1O00400 549 aaPredicted RBP17.26■□□□□ 0.35
PTPRA-207ENST00000431048 SULT1C4O75897 302 aa17.26■□□□□ 0.35
PTPRA-207ENST00000431048 ZNF44P15621 663 aa17.26■□□□□ 0.35
PTPRA-207ENST00000431048 HOXB6P17509 224 aaKnown RBP17.26■□□□□ 0.35
PTPRA-207ENST00000431048 SSX6Q7RTT6 188 aa17.26■□□□□ 0.35
PTPRA-207ENST00000431048 BCDIN3DQ7Z5W3 292 aaKnown RBP17.26■□□□□ 0.35
PTPRA-207ENST00000431048 Q8N6K4 173 aa17.26■□□□□ 0.35
PTPRA-207ENST00000431048 SPSB1Q96BD6 273 aa17.26■□□□□ 0.35
PTPRA-207ENST00000431048 PRRG3Q9BZD7 231 aa17.26■□□□□ 0.35
PTPRA-207ENST00000431048 IDI2-AS1Q9NZ38 188 aa17.26■□□□□ 0.35
PTPRA-207ENST00000431048 IGHG4P01861 327 aa17.25■□□□□ 0.35
PTPRA-207ENST00000431048 CFHR3Q02985 330 aa17.25■□□□□ 0.35
PTPRA-207ENST00000431048 ZNF816Q0VGE8 651 aaPredicted RBP17.25■□□□□ 0.35
PTPRA-207ENST00000431048 PTGES3Q15185 160 aaKnown RBP17.25■□□□□ 0.35
PTPRA-207ENST00000431048 HSP90B2PQ58FF3 399 aa17.25■□□□□ 0.35
PTPRA-207ENST00000431048 SAXO1Q8IYX7 474 aa17.25■□□□□ 0.35
PTPRA-207ENST00000431048 PRSS35Q8N3Z0 413 aa17.25■□□□□ 0.35
PTPRA-207ENST00000431048 ASB9Q96DX5 294 aa17.25■□□□□ 0.35
PTPRA-207ENST00000431048 ADAT3Q96EY9 351 aaPredicted RBP17.25■□□□□ 0.35
PTPRA-207ENST00000431048 EAF1Q96JC9 268 aaPredicted RBP17.25■□□□□ 0.35
PTPRA-207ENST00000431048 LRGUKQ96M69 825 aa17.25■□□□□ 0.35
PTPRA-207ENST00000431048 OSBPL10Q9BXB5 764 aa17.25■□□□□ 0.35
PTPRA-207ENST00000431048 FAM107BQ9H098 131 aa17.25■□□□□ 0.35
PTPRA-207ENST00000431048 PPIL3Q9H2H8 161 aaKnown RBP17.25■□□□□ 0.35
PTPRA-207ENST00000431048 ZMAT4Q9H898 229 aa17.25■□□□□ 0.35
PTPRA-207ENST00000431048 CALYQ9NYX4 217 aa17.25■□□□□ 0.35
PTPRA-207ENST00000431048 LOC107986453A0A1B0GWG9 222 aa17.24■□□□□ 0.35
PTPRA-207ENST00000431048 B2RBV5 119 aa17.24■□□□□ 0.35
PTPRA-207ENST00000431048 NPIPB11E5RHQ5 1161 aa17.24■□□□□ 0.35
PTPRA-207ENST00000431048 MPZL2O60487 215 aa17.24■□□□□ 0.35
PTPRA-207ENST00000431048 LY86O95711 162 aa17.24■□□□□ 0.35
PTPRA-207ENST00000431048 UBCP0CG48 685 aaKnown RBP17.24■□□□□ 0.35
PTPRA-207ENST00000431048 C21orf33P30042 268 aaPredicted RBP17.24■□□□□ 0.35
PTPRA-207ENST00000431048 SCN1BQ07699 218 aa17.24■□□□□ 0.35
PTPRA-207ENST00000431048 BNIP1Q12981 228 aa17.24■□□□□ 0.35
PTPRA-207ENST00000431048 Q8N9W7 124 aa17.24■□□□□ 0.35
PTPRA-207ENST00000431048 OR10A7Q8NGE5 316 aa17.24■□□□□ 0.35
PTPRA-207ENST00000431048 OR51T1Q8NGJ9 327 aa17.24■□□□□ 0.35
PTPRA-207ENST00000431048 CANT1Q8WVQ1 401 aa17.24■□□□□ 0.35
PTPRA-207ENST00000431048 ZNF446Q9NWS9 450 aa17.24■□□□□ 0.35
PTPRA-207ENST00000431048 ING3Q9NXR8 418 aa17.24■□□□□ 0.35
PTPRA-207ENST00000431048 HYDINQ4G0P3 5121 aa17.23■□□□□ 0.35
PTPRA-207ENST00000431048 NCBP2LA6PVI3 153 aaKnown RBP17.23■□□□□ 0.35
PTPRA-207ENST00000431048 DEGS1O15121 323 aa17.23■□□□□ 0.35
PTPRA-207ENST00000431048 RRP9O43818 475 aaKnown RBP17.23■□□□□ 0.35
PTPRA-207ENST00000431048 IL1AP01583 271 aa17.23■□□□□ 0.35
PTPRA-207ENST00000431048 OR2T7P0C7T2 308 aa17.23■□□□□ 0.35
PTPRA-207ENST00000431048 ATXN7L3Q14CW9 347 aaPredicted RBP17.23■□□□□ 0.35
PTPRA-207ENST00000431048 FAM27D1Q5T7N8 215 aa17.23■□□□□ 0.35
PTPRA-207ENST00000431048 ZNF429Q86V71 674 aa17.23■□□□□ 0.35
PTPRA-207ENST00000431048 IZUMO1Q8IYV9 350 aa17.23■□□□□ 0.35
PTPRA-207ENST00000431048 OR11H1Q8NG94 326 aa17.23■□□□□ 0.35
PTPRA-207ENST00000431048 TMEM163Q8TC26 289 aa17.23■□□□□ 0.35
PTPRA-207ENST00000431048 LEAP2Q969E1 77 aa17.23■□□□□ 0.35
PTPRA-207ENST00000431048 OPALINQ96PE5 141 aa17.23■□□□□ 0.35
PTPRA-207ENST00000431048 ZNF580Q9UK33 172 aa17.23■□□□□ 0.35
PTPRA-207ENST00000431048 A0A1W2PQL4 384 aaPredicted RBP17.22■□□□□ 0.35
PTPRA-207ENST00000431048 IGHV3-7P01780 117 aa17.22■□□□□ 0.35
PTPRA-207ENST00000431048 MT-ND2P03891 347 aa17.22■□□□□ 0.35
PTPRA-207ENST00000431048 GAPDHP04406 335 aaKnown RBP17.22■□□□□ 0.35
PTPRA-207ENST00000431048 PSMB8P28062 276 aa17.22■□□□□ 0.35
PTPRA-207ENST00000431048 CDK5R1Q15078 307 aa17.22■□□□□ 0.35
PTPRA-207ENST00000431048 TMEM244Q5VVB8 128 aa17.22■□□□□ 0.35
PTPRA-207ENST00000431048 GID4Q8IVV7 300 aa17.22■□□□□ 0.35
PTPRA-207ENST00000431048 RDH10Q8IZV5 341 aa17.22■□□□□ 0.35
PTPRA-207ENST00000431048 TCEANCQ8N8B7 351 aa17.22■□□□□ 0.35
PTPRA-207ENST00000431048 OR13A1Q8NGR1 328 aa17.22■□□□□ 0.35
PTPRA-207ENST00000431048 OR2T10Q8NGZ9 312 aa17.22■□□□□ 0.35
PTPRA-207ENST00000431048 MYOZ3Q8TDC0 251 aa17.22■□□□□ 0.35
PTPRA-207ENST00000431048 NRBF2Q96F24 287 aa17.22■□□□□ 0.35
PTPRA-207ENST00000431048 MED4Q9NPJ6 270 aa17.22■□□□□ 0.35
PTPRA-207ENST00000431048 PLSCR3Q9NRY6 295 aa17.22■□□□□ 0.35
PTPRA-207ENST00000431048 NKX1-2Q9UD57 310 aaPredicted RBP17.22■□□□□ 0.35
PTPRA-207ENST00000431048 IGHV1-3A0A0C4DH29 117 aa17.21■□□□□ 0.35
PTPRA-207ENST00000431048 AQP12BA6NM10 295 aa17.21■□□□□ 0.35
PTPRA-207ENST00000431048 DCTN3O75935 186 aa17.21■□□□□ 0.35
PTPRA-207ENST00000431048 OR8U8P0C7N1 319 aa17.21■□□□□ 0.35
PTPRA-207ENST00000431048 FRMD6-AS1P0C7T7 363 aa17.21■□□□□ 0.35
PTPRA-207ENST00000431048 GLP1RP43220 463 aa17.21■□□□□ 0.35
PTPRA-207ENST00000431048 KIR3DL2P43630 455 aa17.21■□□□□ 0.35
PTPRA-207ENST00000431048 RUNX1Q01196 453 aa17.21■□□□□ 0.35
PTPRA-207ENST00000431048 PAX5Q02548 391 aa17.21■□□□□ 0.35
PTPRA-207ENST00000431048 OVCH2Q7RTZ1 564 aa17.21■□□□□ 0.35
PTPRA-207ENST00000431048 AQP12AQ8IXF9 295 aa17.21■□□□□ 0.35
PTPRA-207ENST00000431048 OR10X1Q8NGY0 326 aa17.21■□□□□ 0.35
PTPRA-207ENST00000431048 FGGYQ96C11 551 aa17.21■□□□□ 0.35
PTPRA-207ENST00000431048 TBX5Q99593 518 aa17.21■□□□□ 0.35
PTPRA-207ENST00000431048 WARS2Q9UGM6 360 aaKnown RBP17.21■□□□□ 0.35
PTPRA-207ENST00000431048 ARL2BPQ9Y2Y0 163 aa17.21■□□□□ 0.35
PTPRA-207ENST00000431048 MEIKINA0A087WXM9 373 aa17.2■□□□□ 0.34
PTPRA-207ENST00000431048 HSD17B6O14756 317 aa17.2■□□□□ 0.34
PTPRA-207ENST00000431048 HTR1FP30939 366 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms