RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 OR51T1Q8NGJ9 327 aa11.85□□□□□ -0.51
MSH5-208ENST00000429846 HAVCR2Q8TDQ0 301 aa11.85□□□□□ -0.51
MSH5-208ENST00000429846 TOMM40LQ969M1 308 aa11.85□□□□□ -0.51
MSH5-208ENST00000429846 RPEQ96AT9 228 aa11.85□□□□□ -0.51
MSH5-208ENST00000429846 EXOGQ9Y2C4 368 aaKnown RBP11.85□□□□□ -0.51
MSH5-208ENST00000429846 DNAH3Q8TD57 4116 aa11.84□□□□□ -0.51
MSH5-208ENST00000429846 FAM90A18PA6NE21 464 aa11.84□□□□□ -0.51
MSH5-208ENST00000429846 FAM90A16PA6NEW6 464 aa11.84□□□□□ -0.51
MSH5-208ENST00000429846 FAM90A20PA6NIJ5 464 aa11.84□□□□□ -0.51
MSH5-208ENST00000429846 FAM90A9PA6NNJ1 464 aa11.84□□□□□ -0.51
MSH5-208ENST00000429846 FAM90A12PA8MX19 464 aa11.84□□□□□ -0.51
MSH5-208ENST00000429846 FAM90A5PA8MXJ8 464 aa11.84□□□□□ -0.51
MSH5-208ENST00000429846 FAM90A15PP0C7V4 464 aa11.84□□□□□ -0.51
MSH5-208ENST00000429846 FAM90A13PP0C7W8 464 aa11.84□□□□□ -0.51
MSH5-208ENST00000429846 FAM90A14PP0C7W9 464 aa11.84□□□□□ -0.51
MSH5-208ENST00000429846 FAM90A24PP0C7X0 464 aa11.84□□□□□ -0.51
MSH5-208ENST00000429846 CGB3P0DN86 165 aa11.84□□□□□ -0.51
MSH5-208ENST00000429846 CGB7P0DN87 165 aa11.84□□□□□ -0.51
MSH5-208ENST00000429846 SLC6A1P30531 599 aa11.84□□□□□ -0.51
MSH5-208ENST00000429846 GLP1RP43220 463 aa11.84□□□□□ -0.51
MSH5-208ENST00000429846 GALEQ14376 348 aa11.84□□□□□ -0.51
MSH5-208ENST00000429846 PXT1Q8NFP0 134 aa11.84□□□□□ -0.51
MSH5-208ENST00000429846 OR51D1Q8NGF3 324 aa11.84□□□□□ -0.51
MSH5-208ENST00000429846 ALG8Q9BVK2 526 aa11.84□□□□□ -0.51
MSH5-208ENST00000429846 BARHL1Q9BZE3 327 aa11.84□□□□□ -0.51
MSH5-208ENST00000429846 PPIL3Q9H2H8 161 aaKnown RBP11.84□□□□□ -0.51
MSH5-208ENST00000429846 LINC00574Q9H8X3 128 aa11.84□□□□□ -0.51
MSH5-208ENST00000429846 INPP5EQ9NRR6 644 aa11.84□□□□□ -0.51
MSH5-208ENST00000429846 ING3Q9NXR8 418 aa11.84□□□□□ -0.51
MSH5-208ENST00000429846 CALYQ9NYX4 217 aa11.84□□□□□ -0.51
MSH5-208ENST00000429846 PSMB11A5LHX3 300 aa11.83□□□□□ -0.52
MSH5-208ENST00000429846 E9PQ18 207 aa11.83□□□□□ -0.52
MSH5-208ENST00000429846 H0YJX3 145 aa11.83□□□□□ -0.52
MSH5-208ENST00000429846 J3QR06 171 aa11.83□□□□□ -0.52
MSH5-208ENST00000429846 K7EIL1 84 aa11.83□□□□□ -0.52
MSH5-208ENST00000429846 EI24O14681 340 aa11.83□□□□□ -0.52
MSH5-208ENST00000429846 IL1AP01583 271 aa11.83□□□□□ -0.52
MSH5-208ENST00000429846 CCDC159P0C7I6 412 aa11.83□□□□□ -0.52
MSH5-208ENST00000429846 NFYBP25208 207 aa11.83□□□□□ -0.52
MSH5-208ENST00000429846 C21orf33P30042 268 aaPredicted RBP11.83□□□□□ -0.52
MSH5-208ENST00000429846 KCNJ3P48549 501 aa11.83□□□□□ -0.52
MSH5-208ENST00000429846 ALDH3A2P51648 485 aa11.83□□□□□ -0.52
MSH5-208ENST00000429846 EGFEM1PQ0D2K5 195 aa11.83□□□□□ -0.52
MSH5-208ENST00000429846 MADCAM1Q13477 382 aa11.83□□□□□ -0.52
MSH5-208ENST00000429846 IL13RA2Q14627 380 aa11.83□□□□□ -0.52
MSH5-208ENST00000429846 PAN3Q58A45 887 aaKnown RBP11.83□□□□□ -0.52
MSH5-208ENST00000429846 C9orf152Q5JTZ5 239 aa11.83□□□□□ -0.52
MSH5-208ENST00000429846 ZNF691Q5VV52 312 aa11.83□□□□□ -0.52
MSH5-208ENST00000429846 C10orf99Q6UWK7 81 aa11.83□□□□□ -0.52
MSH5-208ENST00000429846 RNF144BQ7Z419 303 aa11.83□□□□□ -0.52
MSH5-208ENST00000429846 OR10A7Q8NGE5 316 aa11.83□□□□□ -0.52
MSH5-208ENST00000429846 CHPT1Q8WUD6 406 aa11.83□□□□□ -0.52
MSH5-208ENST00000429846 DPF1Q92782 380 aa11.83□□□□□ -0.52
MSH5-208ENST00000429846 LGALS12Q96DT0 336 aa11.83□□□□□ -0.52
MSH5-208ENST00000429846 FAM53CQ9NYF3 392 aa11.83□□□□□ -0.52
MSH5-208ENST00000429846 DHDHQ9UQ10 334 aa11.83□□□□□ -0.52
MSH5-208ENST00000429846 MEIKINA0A087WXM9 373 aa11.82□□□□□ -0.52
MSH5-208ENST00000429846 SH2D7A6NKC9 451 aaPredicted RBP11.82□□□□□ -0.52
MSH5-208ENST00000429846 MAGEB3O15480 346 aa11.82□□□□□ -0.52
MSH5-208ENST00000429846 FGF16O43320 207 aa11.82□□□□□ -0.52
MSH5-208ENST00000429846 MPZL2O60487 215 aa11.82□□□□□ -0.52
MSH5-208ENST00000429846 ZFPL1O95159 310 aa11.82□□□□□ -0.52
MSH5-208ENST00000429846 FADS2O95864 444 aaKnown RBP11.82□□□□□ -0.52
MSH5-208ENST00000429846 SNRNP70P08621 437 aaKnown RBP11.82□□□□□ -0.52
MSH5-208ENST00000429846 RAB7AP51149 207 aa11.82□□□□□ -0.52
MSH5-208ENST00000429846 VAX1Q5SQQ9 334 aa11.82□□□□□ -0.52
MSH5-208ENST00000429846 SLC16A12Q6ZSM3 486 aa11.82□□□□□ -0.52
MSH5-208ENST00000429846 OR8H3Q8N146 312 aa11.82□□□□□ -0.52
MSH5-208ENST00000429846 LINC00482Q8N8I6 264 aa11.82□□□□□ -0.52
MSH5-208ENST00000429846 OR13A1Q8NGR1 328 aa11.82□□□□□ -0.52
MSH5-208ENST00000429846 OR56B4Q8NH76 319 aa11.82□□□□□ -0.52
MSH5-208ENST00000429846 OR5AK2Q8NH90 309 aa11.82□□□□□ -0.52
MSH5-208ENST00000429846 CNIH3Q8TBE1 160 aa11.82□□□□□ -0.52
MSH5-208ENST00000429846 TSEN15Q8WW01 171 aaKnown RBP11.82□□□□□ -0.52
MSH5-208ENST00000429846 IDI2-AS1Q9NZ38 188 aa11.82□□□□□ -0.52
MSH5-208ENST00000429846 KIF25Q9UIL4 384 aa11.82□□□□□ -0.52
MSH5-208ENST00000429846 TRAV24A0A0B4J272 114 aa11.81□□□□□ -0.52
MSH5-208ENST00000429846 A0A1W2PPI3 338 aa11.81□□□□□ -0.52
MSH5-208ENST00000429846 NPIPB11E5RHQ5 1161 aa11.81□□□□□ -0.52
MSH5-208ENST00000429846 HSPB6O14558 160 aa11.81□□□□□ -0.52
MSH5-208ENST00000429846 TMEM11P17152 192 aa11.81□□□□□ -0.52
MSH5-208ENST00000429846 RAB3AP20336 220 aa11.81□□□□□ -0.52
MSH5-208ENST00000429846 RAB40BQ12829 278 aa11.81□□□□□ -0.52
MSH5-208ENST00000429846 RSBN1Q5VWQ0 802 aaPredicted RBP11.81□□□□□ -0.52
MSH5-208ENST00000429846 LHFPL3Q86UP9 236 aa11.81□□□□□ -0.52
MSH5-208ENST00000429846 C5orf56Q8N8D9 126 aa11.81□□□□□ -0.52
MSH5-208ENST00000429846 PYDC1Q8WXC3 89 aa11.81□□□□□ -0.52
MSH5-208ENST00000429846 Q96MT0 163 aa11.81□□□□□ -0.52
MSH5-208ENST00000429846 MCRIP2Q9BUT9 160 aaKnown RBP11.81□□□□□ -0.52
MSH5-208ENST00000429846 PSG11Q9UQ72 335 aa11.81□□□□□ -0.52
MSH5-208ENST00000429846 GABRB1P18505 474 aa11.8□□□□□ -0.52
MSH5-208ENST00000429846 RPL23AP62750 156 aaKnown RBP11.8□□□□□ -0.52
MSH5-208ENST00000429846 SLC35B1P78383 322 aa11.8□□□□□ -0.52
MSH5-208ENST00000429846 DCTN2Q13561 401 aaKnown RBP11.8□□□□□ -0.52
MSH5-208ENST00000429846 HES1Q14469 280 aa11.8□□□□□ -0.52
MSH5-208ENST00000429846 RSU1Q15404 277 aa11.8□□□□□ -0.52
MSH5-208ENST00000429846 ZIK1Q3SY52 487 aaPredicted RBP11.8□□□□□ -0.52
MSH5-208ENST00000429846 UTF1Q5T230 341 aa11.8□□□□□ -0.52
MSH5-208ENST00000429846 ZNF529Q6P280 563 aa11.8□□□□□ -0.52
MSH5-208ENST00000429846 ZFP1Q6P2D0 407 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms