RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	XPNPEP2	O43895	674 aa		14.2	□□□□□ -0.14
MRPL28-203	ENST00000429738	CLIC3	O95833	236 aa		14.2	□□□□□ -0.14
MRPL28-203	ENST00000429738	ALDOB	P05062	364 aa		14.2	□□□□□ -0.14
MRPL28-203	ENST00000429738	SOX2	P48431	317 aa		14.2	□□□□□ -0.14
MRPL28-203	ENST00000429738	HLA-DRB5	Q30154	266 aa		14.2	□□□□□ -0.14
MRPL28-203	ENST00000429738	TNFAIP8L1	Q8WVP5	186 aa		14.2	□□□□□ -0.14
MRPL28-203	ENST00000429738	TMEM106A	Q96A25	262 aa		14.2	□□□□□ -0.14
MRPL28-203	ENST00000429738	OR6C3	Q9NZP0	311 aa		14.2	□□□□□ -0.14
MRPL28-203	ENST00000429738	DIMT1	Q9UNQ2	313 aa	Known RBP	14.2	□□□□□ -0.14
MRPL28-203	ENST00000429738	KBTBD11-OT1	A0A1B0GTJ5	212 aa		14.19	□□□□□ -0.14
MRPL28-203	ENST00000429738	IRGM	A1A4Y4	181 aa		14.19	□□□□□ -0.14
MRPL28-203	ENST00000429738	FAM172BP	A6NC97	362 aa		14.19	□□□□□ -0.14
MRPL28-203	ENST00000429738	LEUTX	A8MZ59	168 aa		14.19	□□□□□ -0.14
MRPL28-203	ENST00000429738	LY6L	H3BQJ8	138 aa		14.19	□□□□□ -0.14
MRPL28-203	ENST00000429738	MAGEB3	O15480	346 aa		14.19	□□□□□ -0.14
MRPL28-203	ENST00000429738	OGG1	O15527	345 aa		14.19	□□□□□ -0.14
MRPL28-203	ENST00000429738	FBXO24	O75426	580 aa		14.19	□□□□□ -0.14
MRPL28-203	ENST00000429738	CD2	P06729	351 aa		14.19	□□□□□ -0.14
MRPL28-203	ENST00000429738	EMX1	Q04741	257 aa	Predicted RBP	14.19	□□□□□ -0.14
MRPL28-203	ENST00000429738	UTF1	Q5T230	341 aa		14.19	□□□□□ -0.14
MRPL28-203	ENST00000429738	TMPRSS11A	Q6ZMR5	421 aa		14.19	□□□□□ -0.14
MRPL28-203	ENST00000429738	C16orf82	Q7Z2V1	217 aa		14.19	□□□□□ -0.14
MRPL28-203	ENST00000429738	OR4D6	Q8NGJ1	314 aa		14.19	□□□□□ -0.14
MRPL28-203	ENST00000429738	SGCD	Q92629	289 aa		14.19	□□□□□ -0.14
MRPL28-203	ENST00000429738	SMIM19	Q96E16	107 aa		14.19	□□□□□ -0.14
MRPL28-203	ENST00000429738	KIRREL1	Q96J84	757 aa		14.19	□□□□□ -0.14
MRPL28-203	ENST00000429738	OCSTAMP	Q9BR26	566 aa		14.19	□□□□□ -0.14
MRPL28-203	ENST00000429738	LINC00574	Q9H8X3	128 aa		14.19	□□□□□ -0.14
MRPL28-203	ENST00000429738	ING3	Q9NXR8	418 aa		14.19	□□□□□ -0.14
MRPL28-203	ENST00000429738	BUB1B-PAK6	H3BSN5	160 aa		14.18	□□□□□ -0.14
MRPL28-203	ENST00000429738	LALBA	P00709	142 aa		14.18	□□□□□ -0.14
MRPL28-203	ENST00000429738	CD28	P10747	220 aa		14.18	□□□□□ -0.14
MRPL28-203	ENST00000429738	PIGY	Q3MUY2	71 aa		14.18	□□□□□ -0.14
MRPL28-203	ENST00000429738	PAN3	Q58A45	887 aa	Known RBP	14.18	□□□□□ -0.14
MRPL28-203	ENST00000429738	NHLRC3	Q5JS37	347 aa		14.18	□□□□□ -0.14
MRPL28-203	ENST00000429738	RSBN1	Q5VWQ0	802 aa	Predicted RBP	14.18	□□□□□ -0.14
MRPL28-203	ENST00000429738	TTC23	Q5W5X9	447 aa		14.18	□□□□□ -0.14
MRPL28-203	ENST00000429738	SATL1	Q86VE3	508 aa		14.18	□□□□□ -0.14
MRPL28-203	ENST00000429738	ZNF485	Q8NCK3	441 aa		14.18	□□□□□ -0.14
MRPL28-203	ENST00000429738	OR13A1	Q8NGR1	328 aa		14.18	□□□□□ -0.14
MRPL28-203	ENST00000429738	OR10K1	Q8NGX5	313 aa		14.18	□□□□□ -0.14
MRPL28-203	ENST00000429738	STMN2	Q93045	179 aa		14.18	□□□□□ -0.14
MRPL28-203	ENST00000429738	CREB3L1	Q96BA8	519 aa		14.18	□□□□□ -0.14
MRPL28-203	ENST00000429738	NR1H4	Q96RI1	486 aa	Predicted RBP	14.18	□□□□□ -0.14
MRPL28-203	ENST00000429738	GPER1	Q99527	375 aa		14.18	□□□□□ -0.14
MRPL28-203	ENST00000429738	LIN7B	Q9HAP6	207 aa		14.18	□□□□□ -0.14
MRPL28-203	ENST00000429738	TMEM138	Q9NPI0	162 aa		14.18	□□□□□ -0.14
MRPL28-203	ENST00000429738	C8orf4	Q9NR00	106 aa		14.18	□□□□□ -0.14
MRPL28-203	ENST00000429738	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	14.18	□□□□□ -0.14
MRPL28-203	ENST00000429738	BABAM2	Q9NXR7	383 aa		14.18	□□□□□ -0.14
MRPL28-203	ENST00000429738	IL36G	Q9NZH8	169 aa		14.18	□□□□□ -0.14
MRPL28-203	ENST00000429738	CLEC2D	Q9UHP7	191 aa		14.18	□□□□□ -0.14
MRPL28-203	ENST00000429738	EXOSC1	Q9Y3B2	195 aa	Known RBP	14.18	□□□□□ -0.14
MRPL28-203	ENST00000429738	TRBV5-5	A0A0J9YX44	114 aa		14.17	□□□□□ -0.14
MRPL28-203	ENST00000429738	ADARB2-AS1	A8MUL3	147 aa		14.17	□□□□□ -0.14
MRPL28-203	ENST00000429738	HSPB6	O14558	160 aa		14.17	□□□□□ -0.14
MRPL28-203	ENST00000429738	BRS3	P32247	399 aa		14.17	□□□□□ -0.14
MRPL28-203	ENST00000429738	OR3A4P	P47883	348 aa		14.17	□□□□□ -0.14
MRPL28-203	ENST00000429738	KCNJ3	P48549	501 aa		14.17	□□□□□ -0.14
MRPL28-203	ENST00000429738	ADARB1	P78563	741 aa	Known RBP	14.17	□□□□□ -0.14
MRPL28-203	ENST00000429738	RSU1	Q15404	277 aa		14.17	□□□□□ -0.14
MRPL28-203	ENST00000429738	TMEM95	Q3KNT9	176 aa		14.17	□□□□□ -0.14
MRPL28-203	ENST00000429738	VAX1	Q5SQQ9	334 aa		14.17	□□□□□ -0.14
MRPL28-203	ENST00000429738	PACRGL	Q8N7B6	248 aa		14.17	□□□□□ -0.14
MRPL28-203	ENST00000429738	ZNF565	Q8N9K5	539 aa		14.17	□□□□□ -0.14
MRPL28-203	ENST00000429738	OR52N1	Q8NH53	320 aa		14.17	□□□□□ -0.14
MRPL28-203	ENST00000429738	PLPPR1	Q8TBJ4	325 aa		14.17	□□□□□ -0.14
MRPL28-203	ENST00000429738	BARHL1	Q9BZE3	327 aa		14.17	□□□□□ -0.14
MRPL28-203	ENST00000429738	IFT22	Q9H7X7	185 aa		14.17	□□□□□ -0.14
MRPL28-203	ENST00000429738	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	14.17	□□□□□ -0.14
MRPL28-203	ENST00000429738	CALY	Q9NYX4	217 aa		14.17	□□□□□ -0.14
MRPL28-203	ENST00000429738	KIF25	Q9UIL4	384 aa		14.17	□□□□□ -0.14
MRPL28-203	ENST00000429738	RYR3	Q15413	4870 aa		14.16	□□□□□ -0.14
MRPL28-203	ENST00000429738	OOSP1	A8MZH6	123 aa		14.16	□□□□□ -0.14
MRPL28-203	ENST00000429738	NPIPB11	E5RHQ5	1161 aa		14.16	□□□□□ -0.14
MRPL28-203	ENST00000429738		H3BUI4	141 aa		14.16	□□□□□ -0.14
MRPL28-203	ENST00000429738	TOR1A	O14656	332 aa		14.16	□□□□□ -0.14
MRPL28-203	ENST00000429738	IGFBP3	P17936	291 aa	Predicted RBP	14.16	□□□□□ -0.14
MRPL28-203	ENST00000429738	CD24	P25063	80 aa		14.16	□□□□□ -0.14
MRPL28-203	ENST00000429738	CEACAM3	P40198	252 aa		14.16	□□□□□ -0.14
MRPL28-203	ENST00000429738	GLP1R	P43220	463 aa		14.16	□□□□□ -0.14
MRPL28-203	ENST00000429738	VDAC2	P45880	294 aa	Predicted RBP	14.16	□□□□□ -0.14
MRPL28-203	ENST00000429738	PRRX1	P54821	245 aa		14.16	□□□□□ -0.14
MRPL28-203	ENST00000429738	LRRC36	Q1X8D7	754 aa		14.16	□□□□□ -0.14
MRPL28-203	ENST00000429738	NSUN5P1	Q3KNT7	163 aa		14.16	□□□□□ -0.14
MRPL28-203	ENST00000429738	TPTE2P1	Q5T6R2	138 aa		14.16	□□□□□ -0.14
MRPL28-203	ENST00000429738	DMKN	Q6E0U4	476 aa	Predicted RBP	14.16	□□□□□ -0.14
MRPL28-203	ENST00000429738	NDUFA11	Q86Y39	141 aa		14.16	□□□□□ -0.14
MRPL28-203	ENST00000429738	LYG1	Q8N1E2	194 aa		14.16	□□□□□ -0.14
MRPL28-203	ENST00000429738	SETD9	Q8NE22	299 aa		14.16	□□□□□ -0.14
MRPL28-203	ENST00000429738	OR13C5	Q8NGS8	318 aa		14.16	□□□□□ -0.14
MRPL28-203	ENST00000429738	OR9G1	Q8NH87	305 aa		14.16	□□□□□ -0.14
MRPL28-203	ENST00000429738	CYGB	Q8WWM9	190 aa		14.16	□□□□□ -0.14
MRPL28-203	ENST00000429738	TMEM80	Q96HE8	168 aa		14.16	□□□□□ -0.14
MRPL28-203	ENST00000429738	PGLYRP3	Q96LB9	341 aa		14.16	□□□□□ -0.14
MRPL28-203	ENST00000429738	RBM14	Q96PK6	669 aa	Known RBP	14.16	□□□□□ -0.14
MRPL28-203	ENST00000429738	FAM192A	Q9GZU8	254 aa		14.16	□□□□□ -0.14
MRPL28-203	ENST00000429738	MMP28	Q9H239	520 aa		14.16	□□□□□ -0.14
MRPL28-203	ENST00000429738	ZNF581	Q9P0T4	197 aa		14.16	□□□□□ -0.14
MRPL28-203	ENST00000429738	MEIKIN	A0A087WXM9	373 aa		14.15	□□□□□ -0.14

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms