RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 CRYGSP22914 178 aa8.2□□□□□ -1.1
NEDD1-203ENST00000429527 RSPO1Q2MKA7 263 aaPredicted RBP8.2□□□□□ -1.1
NEDD1-203ENST00000429527 RTN4RL2Q86UN3 420 aa8.2□□□□□ -1.1
NEDD1-203ENST00000429527 ROBO4Q8WZ75 1007 aa8.2□□□□□ -1.1
NEDD1-203ENST00000429527 CPNE4Q96A23 557 aaPredicted RBP8.2□□□□□ -1.1
NEDD1-203ENST00000429527 SPSB1Q96BD6 273 aa8.2□□□□□ -1.1
NEDD1-203ENST00000429527 ARHGAP5-AS1Q96IT6 56 aa8.2□□□□□ -1.1
NEDD1-203ENST00000429527 TRIB1Q96RU8 372 aa8.2□□□□□ -1.1
NEDD1-203ENST00000429527 TMED3Q9Y3Q3 217 aa8.2□□□□□ -1.1
NEDD1-203ENST00000429527 CXorf65A6NEN9 183 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 SLC22A20A6NK97 555 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 EEF1E1-BLOC1S5C9J1V9 151 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 SIGLEC5O15389 551 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 IGHV2-70P01814 119 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 ZNF20P17024 532 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 AKR1C4P17516 323 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 CPT2P23786 658 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 RPL12P30050 165 aaKnown RBP8.19□□□□□ -1.1
NEDD1-203ENST00000429527 ZNF41P51814 821 aaPredicted RBP8.19□□□□□ -1.1
NEDD1-203ENST00000429527 CD81P60033 236 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 RPL7L1Q6DKI1 246 aaKnown RBP8.19□□□□□ -1.1
NEDD1-203ENST00000429527 FAM212BQ9NTI7 297 aaPredicted RBP8.19□□□□□ -1.1
NEDD1-203ENST00000429527 AKAP9Q99996 3911 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 TRAV1-1A0A0B4J248 108 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 C5orf51A6NDU8 294 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 CYTIPO60759 359 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 ADAP1O75689 374 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 KCNJ3P48549 501 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 ENDOGQ14249 297 aaKnown RBP8.19□□□□□ -1.1
NEDD1-203ENST00000429527 OR7A5Q15622 319 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.19□□□□□ -1.1
NEDD1-203ENST00000429527 TMEM123Q8N131 208 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 OR51F2Q8NH61 342 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 OR51E1Q8TCB6 317 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 MSI2Q96DH6 328 aaKnown RBP8.19□□□□□ -1.1
NEDD1-203ENST00000429527 TECTBQ96PL2 329 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 ZMAT3Q9HA38 289 aaKnown RBP8.19□□□□□ -1.1
NEDD1-203ENST00000429527 ZDHHC8Q9ULC8 765 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 PTPN13Q12923 2485 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 NKX2-6A6NCS4 301 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 C17orf51A8MQB3 221 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 EIF1BO60739 113 aaKnown RBP8.19□□□□□ -1.1
NEDD1-203ENST00000429527 KCTD9Q7L273 389 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 RNF144BQ7Z419 303 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 LINC00346Q8IVM7 164 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 FAM185AQ8N0U4 392 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 OR13C9Q8NGT0 318 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 SLC25A36Q96CQ1 311 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 FBXL17Q9UF56 701 aa8.19□□□□□ -1.1
NEDD1-203ENST00000429527 USP9YO00507 2555 aaPredicted RBP8.19□□□□□ -1.1
NEDD1-203ENST00000429527 A6NNC1 897 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 ZNHIT1O43257 154 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 COL8A1P27658 744 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 RAC3P60763 192 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 POU3F1Q03052 451 aaPredicted RBP8.18□□□□□ -1.1
NEDD1-203ENST00000429527 KISS1Q15726 138 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 BEX5Q5H9J7 111 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 TMEM88Q6PEY1 159 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 FAM214BQ7L5A3 538 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 ZNF283Q8N7M2 679 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 OR9K2Q8NGE7 335 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 TMEM45BQ96B21 275 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 CPNE2Q96FN4 548 aaPredicted RBP8.18□□□□□ -1.1
NEDD1-203ENST00000429527 FOXC2Q99958 501 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 TMEM204Q9BSN7 226 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 PARD6GQ9BYG4 376 aaPredicted RBP8.18□□□□□ -1.1
NEDD1-203ENST00000429527 GPR84Q9NQS5 396 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 K7EPK0 472 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 GATCO43716 136 aaKnown RBP8.18□□□□□ -1.1
NEDD1-203ENST00000429527 ANOS1P23352 680 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 VAMP1P23763 118 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 GNALP38405 381 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 SNU13P55769 128 aaKnown RBP8.18□□□□□ -1.1
NEDD1-203ENST00000429527 BIDP55957 195 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 MYBPHQ13203 477 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 HIKESHIQ53FT3 197 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 HIST2H2BCQ6DN03 193 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 ADAM5Q6NVV9 412 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 OR10H5Q8NGA6 315 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 IL22RA2Q969J5 263 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 NAA60Q9H7X0 242 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 ANXA10Q9UJ72 324 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 FBXO9Q9UK97 447 aaPredicted RBP8.18□□□□□ -1.1
NEDD1-203ENST00000429527 PDZD2O15018 2839 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 A0A0J9YW62 118 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 C2orf72A6NCS6 295 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 CDS2O95674 445 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 SLC25A6P12236 298 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 ACKR3P25106 362 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 NRN1LQ496H8 165 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 LRRC37A5PQ49AS3 106 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 UEVLDQ8IX04 471 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 OR13D1Q8NGV5 346 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 MOB3AQ96BX8 217 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 TMEM56Q96MV1 263 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 NELFAQ9H3P2 528 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 TMEM242Q9NWH2 141 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 TMEM56-RWDD3S4R434 201 aa8.18□□□□□ -1.1
NEDD1-203ENST00000429527 ZNF732B4DXR9 585 aa8.17□□□□□ -1.1
NEDD1-203ENST00000429527 PITX3O75364 302 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms