RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 OCM2P0CE71 109 aa13.08□□□□□ -0.32
VARS-216ENST00000428445 OCMP0CE72 109 aaPredicted RBP13.08□□□□□ -0.32
VARS-216ENST00000428445 CDK5R1Q15078 307 aa13.08□□□□□ -0.32
VARS-216ENST00000428445 OR2W3Q7Z3T1 314 aa13.08□□□□□ -0.32
VARS-216ENST00000428445 DRAM1Q8N682 238 aa13.08□□□□□ -0.32
VARS-216ENST00000428445 OR13C9Q8NGT0 318 aa13.08□□□□□ -0.32
VARS-216ENST00000428445 TFAP2CQ92754 450 aa13.08□□□□□ -0.32
VARS-216ENST00000428445 KIRREL1Q96J84 757 aa13.08□□□□□ -0.32
VARS-216ENST00000428445 HRASLS5Q96KN8 279 aa13.08□□□□□ -0.32
VARS-216ENST00000428445 WWC2-AS2Q96NR7 200 aa13.08□□□□□ -0.32
VARS-216ENST00000428445 NR1H4Q96RI1 486 aaPredicted RBP13.08□□□□□ -0.32
VARS-216ENST00000428445 NCOR1P1Q9H4R4 102 aa13.08□□□□□ -0.32
VARS-216ENST00000428445 MOB4Q9Y3A3 225 aa13.08□□□□□ -0.32
VARS-216ENST00000428445 HSPE1-MOB4S4R3N1 261 aa13.08□□□□□ -0.32
VARS-216ENST00000428445 A0A087X0M5 115 aa13.07□□□□□ -0.32
VARS-216ENST00000428445 A0A1B0GX30 115 aa13.07□□□□□ -0.32
VARS-216ENST00000428445 A0A1W2PPE3 182 aa13.07□□□□□ -0.32
VARS-216ENST00000428445 NUDT19A8MXV4 375 aa13.07□□□□□ -0.32
VARS-216ENST00000428445 J3QRE1 110 aa13.07□□□□□ -0.32
VARS-216ENST00000428445 FAM106CPP0CH98 169 aa13.07□□□□□ -0.32
VARS-216ENST00000428445 CGB3P0DN86 165 aa13.07□□□□□ -0.32
VARS-216ENST00000428445 CGB7P0DN87 165 aa13.07□□□□□ -0.32
VARS-216ENST00000428445 MNDAP41218 407 aa13.07□□□□□ -0.32
VARS-216ENST00000428445 GNG10P50151 68 aa13.07□□□□□ -0.32
VARS-216ENST00000428445 HES1Q14469 280 aa13.07□□□□□ -0.32
VARS-216ENST00000428445 C1orf146Q5VVC0 180 aa13.07□□□□□ -0.32
VARS-216ENST00000428445 CCDC144NLQ6NUI1 221 aa13.07□□□□□ -0.32
VARS-216ENST00000428445 C5orf56Q8N8D9 126 aa13.07□□□□□ -0.32
VARS-216ENST00000428445 OR13A1Q8NGR1 328 aa13.07□□□□□ -0.32
VARS-216ENST00000428445 RFESDQ8TAC1 157 aa13.07□□□□□ -0.32
VARS-216ENST00000428445 TOMM40LQ969M1 308 aa13.07□□□□□ -0.32
VARS-216ENST00000428445 RPEQ96AT9 228 aa13.07□□□□□ -0.32
VARS-216ENST00000428445 AASSQ9UDR5 926 aa13.07□□□□□ -0.32
VARS-216ENST00000428445 KBTBD11-OT1A0A1B0GTJ5 212 aa13.06□□□□□ -0.32
VARS-216ENST00000428445 DAPL1A0PJW8 107 aa13.06□□□□□ -0.32
VARS-216ENST00000428445 ZNF729A6NN14 1252 aaPredicted RBP13.06□□□□□ -0.32
VARS-216ENST00000428445 E9PQ18 207 aa13.06□□□□□ -0.32
VARS-216ENST00000428445 J3QR06 171 aa13.06□□□□□ -0.32
VARS-216ENST00000428445 SLC16A6O15403 523 aa13.06□□□□□ -0.32
VARS-216ENST00000428445 HTR1AP08908 422 aa13.06□□□□□ -0.32
VARS-216ENST00000428445 DBTP11182 482 aaKnown RBP13.06□□□□□ -0.32
VARS-216ENST00000428445 GLP1RP43220 463 aa13.06□□□□□ -0.32
VARS-216ENST00000428445 SNRPGP62308 76 aaKnown RBP13.06□□□□□ -0.32
VARS-216ENST00000428445 LCNL1Q6ZST4 164 aa13.06□□□□□ -0.32
VARS-216ENST00000428445 THNSL2Q86YJ6 484 aa13.06□□□□□ -0.32
VARS-216ENST00000428445 ACBD7Q8N6N7 88 aa13.06□□□□□ -0.32
VARS-216ENST00000428445 ZNF565Q8N9K5 539 aa13.06□□□□□ -0.32
VARS-216ENST00000428445 KLHL30-AS1Q8NEE0 82 aa13.06□□□□□ -0.32
VARS-216ENST00000428445 OR5D14Q8NGL3 314 aa13.06□□□□□ -0.32
VARS-216ENST00000428445 OR13C3Q8NGS6 347 aa13.06□□□□□ -0.32
VARS-216ENST00000428445 OR9G1Q8NH87 305 aa13.06□□□□□ -0.32
VARS-216ENST00000428445 DPF1Q92782 380 aa13.06□□□□□ -0.32
VARS-216ENST00000428445 PCDHB16Q9NRJ7 776 aa13.06□□□□□ -0.32
VARS-216ENST00000428445 IMPAD1Q9NX62 359 aa13.06□□□□□ -0.32
VARS-216ENST00000428445 OR6C3Q9NZP0 311 aa13.06□□□□□ -0.32
VARS-216ENST00000428445 ZNF581Q9P0T4 197 aa13.06□□□□□ -0.32
VARS-216ENST00000428445 KIF25Q9UIL4 384 aa13.06□□□□□ -0.32
VARS-216ENST00000428445 OAZ3Q9UMX2 235 aa13.06□□□□□ -0.32
VARS-216ENST00000428445 PSG11Q9UQ72 335 aa13.06□□□□□ -0.32
VARS-216ENST00000428445 A0A1W2PPI3 338 aa13.05□□□□□ -0.32
VARS-216ENST00000428445 SERPINE3A8MV23 424 aa13.05□□□□□ -0.32
VARS-216ENST00000428445 J3QLW9 94 aa13.05□□□□□ -0.32
VARS-216ENST00000428445 DYNC1I1O14576 645 aa13.05□□□□□ -0.32
VARS-216ENST00000428445 TMEM225BP0DP42 221 aa13.05□□□□□ -0.32
VARS-216ENST00000428445 ZNF19P17023 458 aa13.05□□□□□ -0.32
VARS-216ENST00000428445 TMEM11P17152 192 aa13.05□□□□□ -0.32
VARS-216ENST00000428445 RAB25P57735 213 aa13.05□□□□□ -0.32
VARS-216ENST00000428445 MRPL28Q13084 256 aaKnown RBP13.05□□□□□ -0.32
VARS-216ENST00000428445 SERPINA12Q8IW75 414 aa13.05□□□□□ -0.32
VARS-216ENST00000428445 OR51D1Q8NGF3 324 aa13.05□□□□□ -0.32
VARS-216ENST00000428445 P2RX4Q99571 388 aa13.05□□□□□ -0.32
VARS-216ENST00000428445 ZCCHC4Q9H5U6 513 aa13.05□□□□□ -0.32
VARS-216ENST00000428445 EXOGQ9Y2C4 368 aaKnown RBP13.05□□□□□ -0.32
VARS-216ENST00000428445 MYRFQ9Y2G1 1151 aa13.05□□□□□ -0.32
VARS-216ENST00000428445 ORC6Q9Y5N6 252 aa13.05□□□□□ -0.32
VARS-216ENST00000428445 HUWE1Q7Z6Z7 4374 aaKnown RBP13.04□□□□□ -0.32
VARS-216ENST00000428445 MEIKINA0A087WXM9 373 aa13.04□□□□□ -0.32
VARS-216ENST00000428445 IGHV3-72A0A0B4J1Y9 119 aa13.04□□□□□ -0.32
VARS-216ENST00000428445 TRAV24A0A0B4J272 114 aa13.04□□□□□ -0.32
VARS-216ENST00000428445 H0YJX3 145 aa13.04□□□□□ -0.32
VARS-216ENST00000428445 IGKV1D-33P01593 117 aa13.04□□□□□ -0.32
VARS-216ENST00000428445 IGKV1-33P01594 117 aa13.04□□□□□ -0.32
VARS-216ENST00000428445 ZP1P60852 638 aa13.04□□□□□ -0.32
VARS-216ENST00000428445 ALKBH1Q13686 389 aaKnown RBP13.04□□□□□ -0.32
VARS-216ENST00000428445 ZSCAN26Q16670 478 aa13.04□□□□□ -0.32
VARS-216ENST00000428445 DEFB136Q30KP8 78 aa13.04□□□□□ -0.32
VARS-216ENST00000428445 LPCAT4Q643R3 524 aa13.04□□□□□ -0.32
VARS-216ENST00000428445 FAM53AQ6NSI3 398 aaPredicted RBP13.04□□□□□ -0.32
VARS-216ENST00000428445 SLC16A12Q6ZSM3 486 aa13.04□□□□□ -0.32
VARS-216ENST00000428445 PLPPR1Q8TBJ4 325 aa13.04□□□□□ -0.32
VARS-216ENST00000428445 HAVCR2Q8TDQ0 301 aa13.04□□□□□ -0.32
VARS-216ENST00000428445 MRGPRDQ8TDS7 321 aa13.04□□□□□ -0.32
VARS-216ENST00000428445 RNFT2Q96EX2 444 aa13.04□□□□□ -0.32
VARS-216ENST00000428445 RAX2Q96IS3 184 aa13.04□□□□□ -0.32
VARS-216ENST00000428445 FAM53CQ9NYF3 392 aa13.04□□□□□ -0.32
VARS-216ENST00000428445 CALYQ9NYX4 217 aa13.04□□□□□ -0.32
VARS-216ENST00000428445 IDI2-AS1Q9NZ38 188 aa13.04□□□□□ -0.32
VARS-216ENST00000428445 SAC3D1A6NKF1 404 aa13.03□□□□□ -0.32
VARS-216ENST00000428445 OR4C45A6NMZ5 311 aa13.03□□□□□ -0.32
VARS-216ENST00000428445 HCKP08631 526 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms