RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 WIPF2Q8TF74 440 aaPredicted RBP12.4□□□□□ -0.42
CTDSP1-202ENST00000428361 TNFAIP8L1Q8WVP5 186 aa12.4□□□□□ -0.42
CTDSP1-202ENST00000428361 RPEQ96AT9 228 aa12.4□□□□□ -0.42
CTDSP1-202ENST00000428361 COQ2Q96H96 371 aa12.4□□□□□ -0.42
CTDSP1-202ENST00000428361 RBM14Q96PK6 669 aaKnown RBP12.4□□□□□ -0.42
CTDSP1-202ENST00000428361 OR5M11Q96RB7 305 aa12.4□□□□□ -0.42
CTDSP1-202ENST00000428361 CITED2Q99967 270 aaPredicted RBP12.4□□□□□ -0.42
CTDSP1-202ENST00000428361 PDCD1LG2Q9BQ51 273 aa12.4□□□□□ -0.42
CTDSP1-202ENST00000428361 FAM192AQ9GZU8 254 aa12.4□□□□□ -0.42
CTDSP1-202ENST00000428361 MMP28Q9H239 520 aa12.4□□□□□ -0.42
CTDSP1-202ENST00000428361 ISG20L2Q9H9L3 353 aaKnown RBP12.4□□□□□ -0.42
CTDSP1-202ENST00000428361 S100A14Q9HCY8 104 aa12.4□□□□□ -0.42
CTDSP1-202ENST00000428361 AMBNQ9NP70 447 aa12.4□□□□□ -0.42
CTDSP1-202ENST00000428361 FAM118AQ9NWS6 357 aa12.4□□□□□ -0.42
CTDSP1-202ENST00000428361 PLXNB1O43157 2135 aa12.4□□□□□ -0.43
CTDSP1-202ENST00000428361 KIAA2026Q5HYC2 2103 aa12.4□□□□□ -0.43
CTDSP1-202ENST00000428361 MEIKINA0A087WXM9 373 aa12.39□□□□□ -0.43
CTDSP1-202ENST00000428361 CLIC3O95833 236 aa12.39□□□□□ -0.43
CTDSP1-202ENST00000428361 CSTBP04080 98 aaKnown RBP12.39□□□□□ -0.43
CTDSP1-202ENST00000428361 PF4V1P10720 104 aa12.39□□□□□ -0.43
CTDSP1-202ENST00000428361 MYL12AP19105 171 aa12.39□□□□□ -0.43
CTDSP1-202ENST00000428361 NFYBP25208 207 aa12.39□□□□□ -0.43
CTDSP1-202ENST00000428361 RBM39Q14498 530 aaKnown RBP12.39□□□□□ -0.43
CTDSP1-202ENST00000428361 CDK5R1Q15078 307 aa12.39□□□□□ -0.43
CTDSP1-202ENST00000428361 SLC16A12Q6ZSM3 486 aa12.39□□□□□ -0.43
CTDSP1-202ENST00000428361 LINC00596Q86U02 117 aa12.39□□□□□ -0.43
CTDSP1-202ENST00000428361 SATL1Q86VE3 508 aa12.39□□□□□ -0.43
CTDSP1-202ENST00000428361 OR5AU1Q8NGC0 362 aa12.39□□□□□ -0.43
CTDSP1-202ENST00000428361 CNIH3Q8TBE1 160 aa12.39□□□□□ -0.43
CTDSP1-202ENST00000428361 NR1H4Q96RI1 486 aaPredicted RBP12.39□□□□□ -0.43
CTDSP1-202ENST00000428361 OCSTAMPQ9BR26 566 aa12.39□□□□□ -0.43
CTDSP1-202ENST00000428361 ZNF286AQ9HBT8 521 aa12.39□□□□□ -0.43
CTDSP1-202ENST00000428361 FGF20Q9NP95 211 aaPredicted RBP12.39□□□□□ -0.43
CTDSP1-202ENST00000428361 C8orf4Q9NR00 106 aa12.39□□□□□ -0.43
CTDSP1-202ENST00000428361 CHCHD3Q9NX63 227 aaKnown RBP12.39□□□□□ -0.43
CTDSP1-202ENST00000428361 ING3Q9NXR8 418 aa12.39□□□□□ -0.43
CTDSP1-202ENST00000428361 PRKDCP78527 4128 aaKnown RBP12.38□□□□□ -0.43
CTDSP1-202ENST00000428361 EBAG9O00559 213 aa12.38□□□□□ -0.43
CTDSP1-202ENST00000428361 ZNF780AO75290 641 aaPredicted RBP12.38□□□□□ -0.43
CTDSP1-202ENST00000428361 IL1AP01583 271 aa12.38□□□□□ -0.43
CTDSP1-202ENST00000428361 OR3A4PP47883 348 aa12.38□□□□□ -0.43
CTDSP1-202ENST00000428361 MADCAM1Q13477 382 aa12.38□□□□□ -0.43
CTDSP1-202ENST00000428361 ZSCAN26Q16670 478 aa12.38□□□□□ -0.43
CTDSP1-202ENST00000428361 ZNF529Q6P280 563 aa12.38□□□□□ -0.43
CTDSP1-202ENST00000428361 THNSL2Q86YJ6 484 aa12.38□□□□□ -0.43
CTDSP1-202ENST00000428361 LYG1Q8N1E2 194 aa12.38□□□□□ -0.43
CTDSP1-202ENST00000428361 TOMM40LQ969M1 308 aa12.38□□□□□ -0.43
CTDSP1-202ENST00000428361 TMEM106AQ96A25 262 aa12.38□□□□□ -0.43
CTDSP1-202ENST00000428361 KIRREL1Q96J84 757 aa12.38□□□□□ -0.43
CTDSP1-202ENST00000428361 METTL9Q9H1A3 318 aa12.38□□□□□ -0.43
CTDSP1-202ENST00000428361 TMEM138Q9NPI0 162 aa12.38□□□□□ -0.43
CTDSP1-202ENST00000428361 SMPD3Q9NY59 655 aaPredicted RBP12.38□□□□□ -0.43
CTDSP1-202ENST00000428361 CALYQ9NYX4 217 aa12.38□□□□□ -0.43
CTDSP1-202ENST00000428361 IDI2-AS1Q9NZ38 188 aa12.38□□□□□ -0.43
CTDSP1-202ENST00000428361 CKLFQ9UBR5 152 aa12.38□□□□□ -0.43
CTDSP1-202ENST00000428361 AASSQ9UDR5 926 aa12.38□□□□□ -0.43
CTDSP1-202ENST00000428361 TSSC4Q9Y5U2 329 aaPredicted RBP12.38□□□□□ -0.43
CTDSP1-202ENST00000428361 NOTCH3Q9UM47 2321 aa12.37□□□□□ -0.43
CTDSP1-202ENST00000428361 FAM172BPA6NC97 362 aa12.37□□□□□ -0.43
CTDSP1-202ENST00000428361 GABRPO00591 440 aa12.37□□□□□ -0.43
CTDSP1-202ENST00000428361 HSPB6O14558 160 aa12.37□□□□□ -0.43
CTDSP1-202ENST00000428361 CD33P20138 364 aa12.37□□□□□ -0.43
CTDSP1-202ENST00000428361 SOX2P48431 317 aa12.37□□□□□ -0.43
CTDSP1-202ENST00000428361 RAB7AP51149 207 aa12.37□□□□□ -0.43
CTDSP1-202ENST00000428361 CD83Q01151 205 aa12.37□□□□□ -0.43
CTDSP1-202ENST00000428361 C17orf58Q2M2W7 97 aa12.37□□□□□ -0.43
CTDSP1-202ENST00000428361 ABCA11PQ4W5N1 156 aa12.37□□□□□ -0.43
CTDSP1-202ENST00000428361 FBLN7Q53RD9 439 aa12.37□□□□□ -0.43
CTDSP1-202ENST00000428361 NHLRC3Q5JS37 347 aa12.37□□□□□ -0.43
CTDSP1-202ENST00000428361 OR8H3Q8N146 312 aa12.37□□□□□ -0.43
CTDSP1-202ENST00000428361 SETD9Q8NE22 299 aa12.37□□□□□ -0.43
CTDSP1-202ENST00000428361 Q8NFD4 153 aa12.37□□□□□ -0.43
CTDSP1-202ENST00000428361 SLC29A1Q99808 456 aa12.37□□□□□ -0.43
CTDSP1-202ENST00000428361 ZNF649Q9BS31 505 aa12.37□□□□□ -0.43
CTDSP1-202ENST00000428361 PPIL3Q9H2H8 161 aaKnown RBP12.37□□□□□ -0.43
CTDSP1-202ENST00000428361 IFT22Q9H7X7 185 aa12.37□□□□□ -0.43
CTDSP1-202ENST00000428361 LINC00574Q9H8X3 128 aa12.37□□□□□ -0.43
CTDSP1-202ENST00000428361 RAB9BQ9NP90 201 aa12.37□□□□□ -0.43
CTDSP1-202ENST00000428361 NECAP2Q9NVZ3 263 aa12.37□□□□□ -0.43
CTDSP1-202ENST00000428361 IL36GQ9NZH8 169 aa12.37□□□□□ -0.43
CTDSP1-202ENST00000428361 KIF25Q9UIL4 384 aa12.37□□□□□ -0.43
CTDSP1-202ENST00000428361 MOB4Q9Y3A3 225 aa12.37□□□□□ -0.43
CTDSP1-202ENST00000428361 EXOSC1Q9Y3B2 195 aaKnown RBP12.37□□□□□ -0.43
CTDSP1-202ENST00000428361 HSPE1-MOB4S4R3N1 261 aa12.37□□□□□ -0.43
CTDSP1-202ENST00000428361 TCRBV4S1A1TA0A5B7 111 aa12.36□□□□□ -0.43
CTDSP1-202ENST00000428361 E9PI62 339 aa12.36□□□□□ -0.43
CTDSP1-202ENST00000428361 J3QR06 171 aa12.36□□□□□ -0.43
CTDSP1-202ENST00000428361 HTR3BO95264 441 aa12.36□□□□□ -0.43
CTDSP1-202ENST00000428361 DUS4LO95620 317 aaKnown RBP12.36□□□□□ -0.43
CTDSP1-202ENST00000428361 PF4P02776 101 aa12.36□□□□□ -0.43
CTDSP1-202ENST00000428361 LPLP06858 475 aa12.36□□□□□ -0.43
CTDSP1-202ENST00000428361 LIMS3P0CW19 117 aa12.36□□□□□ -0.43
CTDSP1-202ENST00000428361 LIMS4P0CW20 117 aa12.36□□□□□ -0.43
CTDSP1-202ENST00000428361 JUNBP17275 347 aaPredicted RBP12.36□□□□□ -0.43
CTDSP1-202ENST00000428361 GZMHP20718 246 aa12.36□□□□□ -0.43
CTDSP1-202ENST00000428361 ZNF93P35789 620 aaPredicted RBP12.36□□□□□ -0.43
CTDSP1-202ENST00000428361 GPR176Q14439 515 aa12.36□□□□□ -0.43
CTDSP1-202ENST00000428361 MPV17LQ2QL34 196 aa12.36□□□□□ -0.43
CTDSP1-202ENST00000428361 DDI2Q5TDH0 399 aa12.36□□□□□ -0.43
CTDSP1-202ENST00000428361 TTC23Q5W5X9 447 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms