RNA–Protein interactions for RNA: ENST00000428154.5

PMPCB-202, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 1 (best) BASIC

Gene PMPCB, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-202ENST00000428154 ABCD4O14678 606 aa17.2■□□□□ 0.34
PMPCB-202ENST00000428154 MED6O75586 246 aa17.2■□□□□ 0.34
PMPCB-202ENST00000428154 SWI5Q1ZZU3 235 aa17.2■□□□□ 0.34
PMPCB-202ENST00000428154 SHEQ5VZ18 495 aa17.2■□□□□ 0.34
PMPCB-202ENST00000428154 ZNF695Q8IW36 515 aa17.2■□□□□ 0.34
PMPCB-202ENST00000428154 CLEC18CQ8NCF0 446 aa17.2■□□□□ 0.34
PMPCB-202ENST00000428154 OR11L1Q8NGX0 322 aa17.2■□□□□ 0.34
PMPCB-202ENST00000428154 LYPD6BQ8NI32 183 aa17.2■□□□□ 0.34
PMPCB-202ENST00000428154 GINS3Q9BRX5 216 aa17.2■□□□□ 0.34
PMPCB-202ENST00000428154 OR51I2Q9H344 312 aa17.2■□□□□ 0.34
PMPCB-202ENST00000428154 SPRR3Q9UBC9 169 aa17.2■□□□□ 0.34
PMPCB-202ENST00000428154 POLDIP2Q9Y2S7 368 aa17.2■□□□□ 0.34
PMPCB-202ENST00000428154 DNASE2O00115 360 aaPredicted RBP17.19■□□□□ 0.34
PMPCB-202ENST00000428154 IGHG3P01860 377 aa17.19■□□□□ 0.34
PMPCB-202ENST00000428154 SELEP16581 610 aa17.19■□□□□ 0.34
PMPCB-202ENST00000428154 ATF4P18848 351 aaPredicted RBP17.19■□□□□ 0.34
PMPCB-202ENST00000428154 ZNF169Q14929 603 aaPredicted RBP17.19■□□□□ 0.34
PMPCB-202ENST00000428154 C3AR1Q16581 482 aa17.19■□□□□ 0.34
PMPCB-202ENST00000428154 HIKESHIQ53FT3 197 aa17.19■□□□□ 0.34
PMPCB-202ENST00000428154 BTNL8Q6UX41 500 aa17.19■□□□□ 0.34
PMPCB-202ENST00000428154 P4HA3Q7Z4N8 544 aa17.19■□□□□ 0.34
PMPCB-202ENST00000428154 TBC1D26Q86UD7 250 aa17.19■□□□□ 0.34
PMPCB-202ENST00000428154 MDP1Q86V88 176 aa17.19■□□□□ 0.34
PMPCB-202ENST00000428154 SLC35G3Q8N808 338 aa17.19■□□□□ 0.34
PMPCB-202ENST00000428154 SUMF2Q8NBJ7 301 aa17.19■□□□□ 0.34
PMPCB-202ENST00000428154 TP53RKQ96S44 253 aa17.19■□□□□ 0.34
PMPCB-202ENST00000428154 UQCC1Q9NVA1 299 aa17.19■□□□□ 0.34
PMPCB-202ENST00000428154 NPIPB11E5RHQ5 1161 aa17.18■□□□□ 0.34
PMPCB-202ENST00000428154 F8W036 122 aa17.18■□□□□ 0.34
PMPCB-202ENST00000428154 SYNGR1O43759 233 aa17.18■□□□□ 0.34
PMPCB-202ENST00000428154 SNAPINO95295 136 aa17.18■□□□□ 0.34
PMPCB-202ENST00000428154 UCP1P25874 307 aa17.18■□□□□ 0.34
PMPCB-202ENST00000428154 TNFSF10P50591 281 aa17.18■□□□□ 0.34
PMPCB-202ENST00000428154 TGIF1Q15583 401 aa17.18■□□□□ 0.34
PMPCB-202ENST00000428154 CABLES2Q9BTV7 478 aa17.18■□□□□ 0.34
PMPCB-202ENST00000428154 C12orf49Q9H741 205 aa17.18■□□□□ 0.34
PMPCB-202ENST00000428154 TREM1Q9NP99 234 aa17.18■□□□□ 0.34
PMPCB-202ENST00000428154 CRIM1Q9NZV1 1036 aa17.18■□□□□ 0.34
PMPCB-202ENST00000428154 MED13Q9UHV7 2174 aa17.18■□□□□ 0.34
PMPCB-202ENST00000428154 DEGS1O15121 323 aa17.18■□□□□ 0.34
PMPCB-202ENST00000428154 SCTP09683 121 aa17.18■□□□□ 0.34
PMPCB-202ENST00000428154 FAM76BQ5HYJ3 339 aa17.18■□□□□ 0.34
PMPCB-202ENST00000428154 SPIN3Q5JUX0 258 aa17.18■□□□□ 0.34
PMPCB-202ENST00000428154 ATRAIDQ6UW56 229 aa17.18■□□□□ 0.34
PMPCB-202ENST00000428154 PIP4P1Q86T03 277 aa17.18■□□□□ 0.34
PMPCB-202ENST00000428154 MRPL30Q8TCC3 161 aaKnown RBP17.18■□□□□ 0.34
PMPCB-202ENST00000428154 BOD1Q96IK1 185 aa17.18■□□□□ 0.34
PMPCB-202ENST00000428154 KIRREL1Q96J84 757 aa17.18■□□□□ 0.34
PMPCB-202ENST00000428154 STRAPQ9Y3F4 350 aaKnown RBP17.18■□□□□ 0.34
PMPCB-202ENST00000428154 KNTC1P50748 2209 aa17.17■□□□□ 0.34
PMPCB-202ENST00000428154 H0Y980 276 aa17.17■□□□□ 0.34
PMPCB-202ENST00000428154 ZNF205O95201 554 aa17.17■□□□□ 0.34
PMPCB-202ENST00000428154 ACAA1P09110 424 aaPredicted RBP17.17■□□□□ 0.34
PMPCB-202ENST00000428154 ZNF14P17017 642 aaPredicted RBP17.17■□□□□ 0.34
PMPCB-202ENST00000428154 VDAC1P21796 283 aa17.17■□□□□ 0.34
PMPCB-202ENST00000428154 TUBG1P23258 451 aa17.17■□□□□ 0.34
PMPCB-202ENST00000428154 UBE2NP61088 152 aaKnown RBP17.17■□□□□ 0.34
PMPCB-202ENST00000428154 HLA-DRB3P79483 266 aa17.17■□□□□ 0.34
PMPCB-202ENST00000428154 GABRA6Q16445 453 aa17.17■□□□□ 0.34
PMPCB-202ENST00000428154 INO80CQ6PI98 192 aaPredicted RBP17.17■□□□□ 0.34
PMPCB-202ENST00000428154 SELENOHQ8IZQ5 122 aaKnown RBP17.17■□□□□ 0.34
PMPCB-202ENST00000428154 OR5D13Q8NGL4 314 aa17.17■□□□□ 0.34
PMPCB-202ENST00000428154 SECTM1Q8WVN6 248 aa17.17■□□□□ 0.34
PMPCB-202ENST00000428154 SLC25A31Q9H0C2 315 aa17.17■□□□□ 0.34
PMPCB-202ENST00000428154 HRH4Q9H3N8 390 aa17.17■□□□□ 0.34
PMPCB-202ENST00000428154 CDH20Q9HBT6 801 aa17.17■□□□□ 0.34
PMPCB-202ENST00000428154 TUBG2Q9NRH3 451 aa17.17■□□□□ 0.34
PMPCB-202ENST00000428154 SHANK1Q9Y566 2161 aa17.17■□□□□ 0.34
PMPCB-202ENST00000428154 DNAJC13O75165 2243 aa17.17■□□□□ 0.34
PMPCB-202ENST00000428154 ZNF407Q9C0G0 2248 aa17.17■□□□□ 0.34
PMPCB-202ENST00000428154 CDRT15L2A8MXV6 281 aa17.16■□□□□ 0.34
PMPCB-202ENST00000428154 RAC2P15153 192 aa17.16■□□□□ 0.34
PMPCB-202ENST00000428154 RCC1P18754 421 aaPredicted RBP17.16■□□□□ 0.34
PMPCB-202ENST00000428154 NKX2-1P43699 371 aaPredicted RBP17.16■□□□□ 0.34
PMPCB-202ENST00000428154 HMGN3Q15651 99 aa17.16■□□□□ 0.34
PMPCB-202ENST00000428154 MEX3BQ6ZN04 569 aaKnown RBP17.16■□□□□ 0.34
PMPCB-202ENST00000428154 CLRN3Q8NCR9 226 aa17.16■□□□□ 0.34
PMPCB-202ENST00000428154 DMBX1Q8NFW5 382 aa17.16■□□□□ 0.34
PMPCB-202ENST00000428154 OR52M1Q8NGK5 317 aa17.16■□□□□ 0.34
PMPCB-202ENST00000428154 LUZP4Q9P127 313 aa17.16■□□□□ 0.34
PMPCB-202ENST00000428154 PURGQ9UJV8 347 aaKnown RBP17.16■□□□□ 0.34
PMPCB-202ENST00000428154 RCL1Q9Y2P8 373 aaKnown RBP17.16■□□□□ 0.34
PMPCB-202ENST00000428154 FBXO24O75426 580 aa17.16■□□□□ 0.34
PMPCB-202ENST00000428154 SPP1P10451 314 aa17.16■□□□□ 0.34
PMPCB-202ENST00000428154 SLC25A6P12236 298 aa17.16■□□□□ 0.34
PMPCB-202ENST00000428154 LPAR6P43657 344 aa17.16■□□□□ 0.34
PMPCB-202ENST00000428154 ZNF266Q14584 549 aa17.16■□□□□ 0.34
PMPCB-202ENST00000428154 HERPUD1Q15011 391 aa17.16■□□□□ 0.34
PMPCB-202ENST00000428154 IGFL2Q6UWQ7 119 aa17.16■□□□□ 0.34
PMPCB-202ENST00000428154 FAM219AQ8IW50 185 aa17.16■□□□□ 0.34
PMPCB-202ENST00000428154 GAPTQ8N292 157 aa17.16■□□□□ 0.34
PMPCB-202ENST00000428154 BOLLQ8N9W6 283 aaKnown RBP17.16■□□□□ 0.34
PMPCB-202ENST00000428154 NRIP2Q9BQI9 281 aa17.16■□□□□ 0.34
PMPCB-202ENST00000428154 C11orf1Q9H5F2 150 aa17.16■□□□□ 0.34
PMPCB-202ENST00000428154 DLL3Q9NYJ7 618 aa17.16■□□□□ 0.34
PMPCB-202ENST00000428154 CLCF1Q9UBD9 225 aa17.16■□□□□ 0.34
PMPCB-202ENST00000428154 OR2W1Q9Y3N9 320 aa17.16■□□□□ 0.34
PMPCB-202ENST00000428154 TRAV24A0A0B4J272 114 aa17.15■□□□□ 0.34
PMPCB-202ENST00000428154 TMEM210A6NLX4 147 aa17.15■□□□□ 0.34
PMPCB-202ENST00000428154 RNASEK-C17orf49H0YIS7 233 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms