RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 IFT22Q9H7X7 185 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 DNAJB11Q9UBS4 358 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 A0A1B0GW55 424 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 MBD3L4A6NDZ8 208 aaPredicted RBP11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 MBD3L3A6NE82 208 aaPredicted RBP11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 MBD3L5A6NJ08 208 aaPredicted RBP11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 CDIPTO14735 213 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 SCGB1D2O95969 90 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 CGAP01215 116 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 GLAP06280 429 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 GRPP07492 148 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 CTXN2P0C2S0 81 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 CECR9P0C854 216 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 DUX4L2P0CJ85 424 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 DUX4L3P0CJ86 424 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 DUX4L4P0CJ87 422 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 DUX4L5P0CJ88 424 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 DUX4L6P0CJ89 424 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 DUX4L7P0CJ90 424 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 SNTB1Q13884 538 aaKnown RBP11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 SMCO1Q147U7 214 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 SPIN3Q5JUX0 258 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 Q6P435 159 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 SEM1Q6ZVN7 128 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 BHLHA15Q7RTS1 189 aaPredicted RBP11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 LYZL2Q7Z4W2 148 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 LRTM2Q8N967 370 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 MBD3L2Q8NHZ7 208 aaPredicted RBP11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 SNIP1Q8TAD8 396 aaKnown RBP11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 STOML3Q8TAV4 291 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 MSI2Q96DH6 328 aaKnown RBP11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 C18orf12Q96KH6 178 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 LRFN3Q9BTN0 628 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 DUX4Q9UBX2 424 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 FBXO9Q9UK97 447 aaPredicted RBP11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 SESN1Q9Y6P5 492 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 TRBV6-6A0A0A6YYG2 114 aa11.89□□□□□ -0.51
APOBEC3D-202ENST00000427494 IGKV1-6A0A0C4DH72 117 aa11.89□□□□□ -0.51
APOBEC3D-202ENST00000427494 SIRPB1O00241 398 aa11.89□□□□□ -0.51
APOBEC3D-202ENST00000427494 MPPED1O15442 326 aa11.89□□□□□ -0.51
APOBEC3D-202ENST00000427494 TPT1P13693 172 aaKnown RBP11.89□□□□□ -0.51
APOBEC3D-202ENST00000427494 GNRHRP30968 328 aa11.89□□□□□ -0.51
APOBEC3D-202ENST00000427494 ZNF154Q13106 437 aa11.89□□□□□ -0.51
APOBEC3D-202ENST00000427494 PAN3Q58A45 887 aaKnown RBP11.89□□□□□ -0.51
APOBEC3D-202ENST00000427494 FAM185AQ8N0U4 392 aa11.89□□□□□ -0.51
APOBEC3D-202ENST00000427494 LRRC20Q8TCA0 184 aa11.89□□□□□ -0.51
APOBEC3D-202ENST00000427494 GLYATL2Q8WU03 294 aa11.89□□□□□ -0.51
APOBEC3D-202ENST00000427494 TP53RKQ96S44 253 aa11.89□□□□□ -0.51
APOBEC3D-202ENST00000427494 OBP2BQ9NPH6 170 aa11.89□□□□□ -0.51
APOBEC3D-202ENST00000427494 ZNF71Q9NQZ8 489 aaPredicted RBP11.89□□□□□ -0.51
APOBEC3D-202ENST00000427494 CYTL1Q9NRR1 136 aa11.89□□□□□ -0.51
APOBEC3D-202ENST00000427494 TINAGQ9UJW2 476 aa11.89□□□□□ -0.51
APOBEC3D-202ENST00000427494 LSM5Q9Y4Y9 91 aaKnown RBP11.89□□□□□ -0.51
APOBEC3D-202ENST00000427494 SHANK1Q9Y566 2161 aa11.89□□□□□ -0.51
APOBEC3D-202ENST00000427494 CACNA1GO43497 2377 aa11.89□□□□□ -0.51
APOBEC3D-202ENST00000427494 C3orf85A0A1B0GTC6 90 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 TMEM210A6NLX4 147 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 K7EM74 188 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 DEDDO75618 318 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 NXPH2O95156 264 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 PGA5P0DJD9 388 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 ERVK11-1P61568 191 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 HLA-DRB3P79483 266 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 MEX3BQ6ZN04 569 aaKnown RBP11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 RBMXL3Q8N7X1 1067 aaKnown RBP11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 OR8G5Q8NG78 346 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 NRIP2Q9BQI9 281 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 SLC5A7Q9GZV3 580 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 SHARPINQ9H0F6 387 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 ZC4H2Q9NQZ6 224 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 TMEM100Q9NV29 134 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 LUZP4Q9P127 313 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 PURGQ9UJV8 347 aaKnown RBP11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 ZFHX4Q86UP3 3567 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 LOC400499M0QZD8 3231 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 IGKV1D-13A0A0B4J2D9 117 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 H7C1Q1 480 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 GPR31O00270 319 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 SHOXO15266 292 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 TUSC2O75896 110 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 OR2H2O95918 312 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 IGKV1-13P0DP09 117 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 RCC1P18754 421 aaPredicted RBP11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 MDH2P40926 338 aaKnown RBP11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 P2RY6Q15077 328 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 ZNF880Q6PDB4 577 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 ZNF818PQ6ZRF7 136 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 BEND4Q6ZU67 534 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 TBC1D26Q86UD7 250 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 LHFPL5Q8TAF8 219 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 FZR1Q9UM11 496 aa11.88□□□□□ -0.51
APOBEC3D-202ENST00000427494 IGHV1-18A0A0C4DH31 117 aa11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 SLC33A1O00400 549 aaPredicted RBP11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 HSD17B6O14756 317 aa11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 MLNRO43193 412 aa11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 TIMM8AO60220 97 aaPredicted RBP11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 IGLV1-44P01699 117 aa11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 HKR1P10072 659 aa11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 KCNJ3P48549 501 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms