RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 FARSAQ9Y285 508 aaKnown RBP1.35□□□□□ -2.19
PTPRC-208ENST00000427110 C15orf41Q9Y2V0 281 aa1.35□□□□□ -2.19
PTPRC-208ENST00000427110 COMMD3-BMI1R4GMX3 469 aa1.35□□□□□ -2.19
PTPRC-208ENST00000427110 PCM1Q15154 2024 aa1.35□□□□□ -2.19
PTPRC-208ENST00000427110 TET1Q8NFU7 2136 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 UTRNP46939 3433 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 IGKV1-27A0A075B6S5 117 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 CCL15-CCL14A0A0B4J2E2 113 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 IGHV1-3A0A0C4DH29 117 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 SPRR5A0A1B0GTR4 108 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 CEACAM18A8MTB9 384 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 CENPBD1B2RD01 187 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 TMEM114B3SHH9 223 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 GOLGA8MH3BSY2 632 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 MYL12BO14950 172 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 BANF1O75531 89 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 SCO1O75880 301 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 KLHL2O95198 593 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 PSMG1O95456 288 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 SMIM10L2AP0DMW4 78 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 SMIM10L2BP0DMW5 78 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 GFAPP14136 432 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 BGNP21810 368 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 PRKACBP22694 351 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 OR1G1P47890 313 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 CLDN8P56748 225 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 DAOAP59103 153 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 OR2B8PP59922 312 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 KRTAP10-10P60014 251 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 RPL26P61254 145 aaKnown RBP1.34□□□□□ -2.19
PTPRC-208ENST00000427110 DYNLT1P63172 113 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 PAFAH1B2P68402 229 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 XIAPP98170 497 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 FUT5Q11128 374 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 STX3Q13277 289 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 DOC2AQ14183 400 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 CCL15Q16663 113 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 CCDC153Q494R4 210 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 DNAL1Q4LDG9 190 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 C6orf99Q4VX62 202 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 SPANXN3Q5MJ09 141 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 BRMS1LQ5PSV4 323 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 TPRG1LQ5T0D9 272 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 LINC00523Q86TU6 105 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 CRLF3Q8IUI8 442 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 DEFB106AQ8N104 65 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 ZNF567Q8N184 647 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 C12orf29Q8N999 325 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 OR4M2Q8NGB6 313 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 OR1S1Q8NH92 325 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 OR1L1Q8NH94 360 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 ENKURQ8TC29 256 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 PDCD6IPQ8WUM4 868 aaKnown RBP1.34□□□□□ -2.19
PTPRC-208ENST00000427110 C17orf50Q8WW18 174 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 CDKL2Q92772 493 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 NAT6Q93015 286 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 CPNE4Q96A23 557 aaPredicted RBP1.34□□□□□ -2.19
PTPRC-208ENST00000427110 KIAA1143Q96AT1 154 aaPredicted RBP1.34□□□□□ -2.19
PTPRC-208ENST00000427110 GPR82Q96P67 336 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 PPP1R2P1Q96PQ5 205 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 PKMYT1Q99640 499 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 GPR22Q99680 433 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 ACBD6Q9BR61 282 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 RTBDNQ9BSG5 229 aaPredicted RBP1.34□□□□□ -2.19
PTPRC-208ENST00000427110 KIFC1Q9BW19 673 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 C20orf27Q9GZN8 174 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 IL22Q9GZX6 179 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 CXCL16Q9H2A7 254 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 DHX35Q9H5Z1 703 aaKnown RBP1.34□□□□□ -2.19
PTPRC-208ENST00000427110 REEP1Q9H902 201 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 RBFOX1Q9NWB1 397 aaKnown RBP1.34□□□□□ -2.19
PTPRC-208ENST00000427110 TAS2R5Q9NYW4 299 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 IL37Q9NZH6 218 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 STX18Q9P2W9 335 aaKnown RBP1.34□□□□□ -2.19
PTPRC-208ENST00000427110 MARCOQ9UEW3 520 aaPredicted RBP1.34□□□□□ -2.19
PTPRC-208ENST00000427110 RHBDD3Q9Y3P4 386 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 HEY1Q9Y5J3 304 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 COL4A6Q14031 1691 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 DENND4AQ7Z401 1863 aa1.34□□□□□ -2.19
PTPRC-208ENST00000427110 KIF26AQ9ULI4 1882 aaPredicted RBP1.34□□□□□ -2.19
PTPRC-208ENST00000427110 ALPK3Q96L96 1907 aa1.34□□□□□ -2.2
PTPRC-208ENST00000427110 BPTFQ12830 3046 aa1.34□□□□□ -2.2
PTPRC-208ENST00000427110 LTBP2Q14767 1821 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 KIAA1549LQ6ZVL6 1849 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 MYOFQ9NZM1 2061 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 PTPRSQ13332 1948 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 A0A0G2JND7 137 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 GOLGA8QA0A0J9YX86 632 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 FAM92AA1XBS5 289 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 ARL5CA6NH57 179 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 ZNF98A6NK75 572 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 SLC22A20A6NK97 555 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 CENPXA8MT69 81 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 A8MUU9 505 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 VGLL3A8MV65 326 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 H3BN98 237 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 I3L4J1 428 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 GOLGA8RI6L899 631 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 GYG2O15488 501 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 HCRTO43612 131 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms