RNA–Protein interactions for RNA: ENST00000426921.5

UBXN4-204, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-204ENST00000426921 LIMS4P0CW20 117 aa16.63■□□□□ 0.25
UBXN4-204ENST00000426921 CD24P25063 80 aa16.63■□□□□ 0.25
UBXN4-204ENST00000426921 GBX2P52951 348 aaPredicted RBP16.63■□□□□ 0.25
UBXN4-204ENST00000426921 IL13RA2Q14627 380 aa16.63■□□□□ 0.25
UBXN4-204ENST00000426921 OXLD1Q5BKU9 147 aa16.63■□□□□ 0.25
UBXN4-204ENST00000426921 CCDC144NLQ6NUI1 221 aa16.63■□□□□ 0.25
UBXN4-204ENST00000426921 OR5AU1Q8NGC0 362 aa16.63■□□□□ 0.25
UBXN4-204ENST00000426921 TSEN15Q8WW01 171 aaKnown RBP16.63■□□□□ 0.25
UBXN4-204ENST00000426921 RGP1Q92546 391 aaPredicted RBP16.63■□□□□ 0.25
UBXN4-204ENST00000426921 FAM118AQ9NWS6 357 aa16.63■□□□□ 0.25
UBXN4-204ENST00000426921 TRAV24A0A0B4J272 114 aa16.62■□□□□ 0.25
UBXN4-204ENST00000426921 GABRPO00591 440 aa16.62■□□□□ 0.25
UBXN4-204ENST00000426921 TOR1AO14656 332 aa16.62■□□□□ 0.25
UBXN4-204ENST00000426921 AMY1AP04745 511 aa16.62■□□□□ 0.25
UBXN4-204ENST00000426921 AMY2AP04746 511 aa16.62■□□□□ 0.25
UBXN4-204ENST00000426921 RAB3AP20336 220 aa16.62■□□□□ 0.25
UBXN4-204ENST00000426921 PRRX1P54821 245 aa16.62■□□□□ 0.25
UBXN4-204ENST00000426921 UTF1Q5T230 341 aa16.62■□□□□ 0.25
UBXN4-204ENST00000426921 ASCL4Q6XD76 172 aa16.62■□□□□ 0.25
UBXN4-204ENST00000426921 Q6ZPA2 131 aa16.62■□□□□ 0.25
UBXN4-204ENST00000426921 CCDC121Q6ZUS5 278 aa16.62■□□□□ 0.25
UBXN4-204ENST00000426921 OR51A2Q8NGJ7 313 aa16.62■□□□□ 0.25
UBXN4-204ENST00000426921 OR9G1Q8NH87 305 aa16.62■□□□□ 0.25
UBXN4-204ENST00000426921 CNIH3Q8TBE1 160 aa16.62■□□□□ 0.25
UBXN4-204ENST00000426921 CAPSLQ8WWF8 208 aa16.62■□□□□ 0.25
UBXN4-204ENST00000426921 STMN2Q93045 179 aa16.62■□□□□ 0.25
UBXN4-204ENST00000426921 KCNJ3P48549 501 aa16.61■□□□□ 0.25
UBXN4-204ENST00000426921 CCDC58Q4VC31 144 aa16.61■□□□□ 0.25
UBXN4-204ENST00000426921 KLHL22Q53GT1 634 aa16.61■□□□□ 0.25
UBXN4-204ENST00000426921 PAN3Q58A45 887 aaKnown RBP16.61■□□□□ 0.25
UBXN4-204ENST00000426921 TCTEX1D4Q5JR98 221 aa16.61■□□□□ 0.25
UBXN4-204ENST00000426921 LPCAT4Q643R3 524 aa16.61■□□□□ 0.25
UBXN4-204ENST00000426921 PQLC1Q8N2U9 271 aa16.61■□□□□ 0.25
UBXN4-204ENST00000426921 ZNF565Q8N9K5 539 aa16.61■□□□□ 0.25
UBXN4-204ENST00000426921 WFDC9Q8NEX5 89 aa16.61■□□□□ 0.25
UBXN4-204ENST00000426921 S100A14Q9HCY8 104 aa16.61■□□□□ 0.25
UBXN4-204ENST00000426921 FGF20Q9NP95 211 aaPredicted RBP16.61■□□□□ 0.25
UBXN4-204ENST00000426921 ING3Q9NXR8 418 aa16.61■□□□□ 0.25
UBXN4-204ENST00000426921 CALYQ9NYX4 217 aa16.61■□□□□ 0.25
UBXN4-204ENST00000426921 KIF25Q9UIL4 384 aa16.61■□□□□ 0.25
UBXN4-204ENST00000426921 FAM90A18PA6NE21 464 aa16.6■□□□□ 0.25
UBXN4-204ENST00000426921 FAM90A16PA6NEW6 464 aa16.6■□□□□ 0.25
UBXN4-204ENST00000426921 FAM90A20PA6NIJ5 464 aa16.6■□□□□ 0.25
UBXN4-204ENST00000426921 FAM90A9PA6NNJ1 464 aa16.6■□□□□ 0.25
UBXN4-204ENST00000426921 FAM90A12PA8MX19 464 aa16.6■□□□□ 0.25
UBXN4-204ENST00000426921 FAM90A5PA8MXJ8 464 aa16.6■□□□□ 0.25
UBXN4-204ENST00000426921 M0QZK8 103 aa16.6■□□□□ 0.25
UBXN4-204ENST00000426921 IL1AP01583 271 aa16.6■□□□□ 0.25
UBXN4-204ENST00000426921 FAM90A15PP0C7V4 464 aa16.6■□□□□ 0.25
UBXN4-204ENST00000426921 FAM90A13PP0C7W8 464 aa16.6■□□□□ 0.25
UBXN4-204ENST00000426921 FAM90A14PP0C7W9 464 aa16.6■□□□□ 0.25
UBXN4-204ENST00000426921 FAM90A24PP0C7X0 464 aa16.6■□□□□ 0.25
UBXN4-204ENST00000426921 MNDAP41218 407 aa16.6■□□□□ 0.25
UBXN4-204ENST00000426921 GLP1RP43220 463 aa16.6■□□□□ 0.25
UBXN4-204ENST00000426921 GTF2A1P52655 376 aaPredicted RBP16.6■□□□□ 0.25
UBXN4-204ENST00000426921 ZSCAN26Q16670 478 aa16.6■□□□□ 0.25
UBXN4-204ENST00000426921 ABCA11PQ4W5N1 156 aa16.6■□□□□ 0.25
UBXN4-204ENST00000426921 RSBN1Q5VWQ0 802 aaPredicted RBP16.6■□□□□ 0.25
UBXN4-204ENST00000426921 OR13A1Q8NGR1 328 aa16.6■□□□□ 0.25
UBXN4-204ENST00000426921 GPR148Q8TDV2 347 aa16.6■□□□□ 0.25
UBXN4-204ENST00000426921 TNFAIP8L1Q8WVP5 186 aa16.6■□□□□ 0.25
UBXN4-204ENST00000426921 PCDHB16Q9NRJ7 776 aa16.6■□□□□ 0.25
UBXN4-204ENST00000426921 MEIKINA0A087WXM9 373 aa16.59■□□□□ 0.25
UBXN4-204ENST00000426921 NPIPB11E5RHQ5 1161 aa16.59■□□□□ 0.25
UBXN4-204ENST00000426921 HSPB6O14558 160 aa16.59■□□□□ 0.25
UBXN4-204ENST00000426921 MAGEB3O15480 346 aa16.59■□□□□ 0.25
UBXN4-204ENST00000426921 WBP4O75554 376 aaKnown RBP16.59■□□□□ 0.25
UBXN4-204ENST00000426921 PRB2P02812 416 aaPredicted RBP16.59■□□□□ 0.25
UBXN4-204ENST00000426921 CD2P06729 351 aa16.59■□□□□ 0.25
UBXN4-204ENST00000426921 LPLP06858 475 aa16.59■□□□□ 0.25
UBXN4-204ENST00000426921 OR3A4PP47883 348 aa16.59■□□□□ 0.25
UBXN4-204ENST00000426921 NHLRC3Q5JS37 347 aa16.59■□□□□ 0.25
UBXN4-204ENST00000426921 XAF1Q6GPH4 301 aa16.59■□□□□ 0.25
UBXN4-204ENST00000426921 RPL22L1Q6P5R6 122 aaKnown RBP16.59■□□□□ 0.25
UBXN4-204ENST00000426921 PHF21AQ96BD5 680 aa16.59■□□□□ 0.25
UBXN4-204ENST00000426921 RDH12Q96NR8 316 aa16.59■□□□□ 0.25
UBXN4-204ENST00000426921 BARHL1Q9BZE3 327 aa16.59■□□□□ 0.25
UBXN4-204ENST00000426921 IFT22Q9H7X7 185 aa16.59■□□□□ 0.25
UBXN4-204ENST00000426921 NECAP2Q9NVZ3 263 aa16.59■□□□□ 0.25
UBXN4-204ENST00000426921 TAS2R4Q9NYW5 299 aa16.59■□□□□ 0.25
UBXN4-204ENST00000426921 IL36GQ9NZH8 169 aa16.59■□□□□ 0.25
UBXN4-204ENST00000426921 AMMECR1Q9Y4X0 333 aaPredicted RBP16.59■□□□□ 0.25
UBXN4-204ENST00000426921 J3QR06 171 aa16.58■□□□□ 0.24
UBXN4-204ENST00000426921 NFYBP25208 207 aa16.58■□□□□ 0.24
UBXN4-204ENST00000426921 C21orf33P30042 268 aaPredicted RBP16.58■□□□□ 0.24
UBXN4-204ENST00000426921 SOX2P48431 317 aa16.58■□□□□ 0.24
UBXN4-204ENST00000426921 RBM39Q14498 530 aaKnown RBP16.58■□□□□ 0.24
UBXN4-204ENST00000426921 RSU1Q15404 277 aa16.58■□□□□ 0.24
UBXN4-204ENST00000426921 PIGYQ3MUY2 71 aa16.58■□□□□ 0.24
UBXN4-204ENST00000426921 CENPVQ7Z7K6 275 aaPredicted RBP16.58■□□□□ 0.24
UBXN4-204ENST00000426921 THNSL2Q86YJ6 484 aa16.58■□□□□ 0.24
UBXN4-204ENST00000426921 OR10A7Q8NGE5 316 aa16.58■□□□□ 0.24
UBXN4-204ENST00000426921 PLPPR1Q8TBJ4 325 aa16.58■□□□□ 0.24
UBXN4-204ENST00000426921 NR1H4Q96RI1 486 aaPredicted RBP16.58■□□□□ 0.24
UBXN4-204ENST00000426921 GPER1Q99527 375 aa16.58■□□□□ 0.24
UBXN4-204ENST00000426921 IDI2-AS1Q9NZ38 188 aa16.58■□□□□ 0.24
UBXN4-204ENST00000426921 TSSC4Q9Y5U2 329 aaPredicted RBP16.58■□□□□ 0.24
UBXN4-204ENST00000426921 FAM106CPP0CH98 169 aa16.57■□□□□ 0.24
UBXN4-204ENST00000426921 DCKP27707 260 aa16.57■□□□□ 0.24
UBXN4-204ENST00000426921 SMN1Q16637 294 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms