RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 AMBPP02760 352 aa13.95□□□□□ -0.18
PKP4-205ENST00000426248 SUMO3P55854 103 aaPredicted RBP13.95□□□□□ -0.18
PKP4-205ENST00000426248 ANKRD39Q53RE8 183 aa13.95□□□□□ -0.18
PKP4-205ENST00000426248 SPIN3Q5JUX0 258 aa13.95□□□□□ -0.18
PKP4-205ENST00000426248 URM1Q9BTM9 101 aaKnown RBP13.95□□□□□ -0.18
PKP4-205ENST00000426248 RHBDD3Q9Y3P4 386 aa13.95□□□□□ -0.18
PKP4-205ENST00000426248 MEGF11A6BM72 1044 aa13.94□□□□□ -0.18
PKP4-205ENST00000426248 DVL1O14640 695 aa13.94□□□□□ -0.18
PKP4-205ENST00000426248 IGHG1P01857 330 aa13.94□□□□□ -0.18
PKP4-205ENST00000426248 IL11P20809 199 aa13.94□□□□□ -0.18
PKP4-205ENST00000426248 FUT3P21217 361 aa13.94□□□□□ -0.18
PKP4-205ENST00000426248 TDGF1P3P51864 188 aa13.94□□□□□ -0.18
PKP4-205ENST00000426248 FBXW12Q6X9E4 464 aa13.94□□□□□ -0.18
PKP4-205ENST00000426248 SDSLQ96GA7 329 aa13.94□□□□□ -0.18
PKP4-205ENST00000426248 IMMP1LQ96LU5 166 aa13.94□□□□□ -0.18
PKP4-205ENST00000426248 HIST1H2AAQ96QV6 131 aa13.94□□□□□ -0.18
PKP4-205ENST00000426248 PATZ1Q9HBE1 687 aaKnown RBP13.94□□□□□ -0.18
PKP4-205ENST00000426248 FKBP11Q9NYL4 201 aa13.94□□□□□ -0.18
PKP4-205ENST00000426248 TRAV34A0A0B4J273 112 aa13.94□□□□□ -0.18
PKP4-205ENST00000426248 F5H5K5 113 aa13.94□□□□□ -0.18
PKP4-205ENST00000426248 P2RY10O00398 339 aa13.94□□□□□ -0.18
PKP4-205ENST00000426248 UPK3AO75631 287 aa13.94□□□□□ -0.18
PKP4-205ENST00000426248 CSNK1A1P48729 337 aa13.94□□□□□ -0.18
PKP4-205ENST00000426248 MRPS34P82930 218 aaKnown RBP13.94□□□□□ -0.18
PKP4-205ENST00000426248 OR1P1Q8NH06 330 aa13.94□□□□□ -0.18
PKP4-205ENST00000426248 ABHD5Q8WTS1 349 aa13.94□□□□□ -0.18
PKP4-205ENST00000426248 FGGYQ96C11 551 aa13.94□□□□□ -0.18
PKP4-205ENST00000426248 STARD10Q9Y365 291 aa13.94□□□□□ -0.18
PKP4-205ENST00000426248 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.94□□□□□ -0.187e-7■■■□□ 17.3
PKP4-205ENST00000426248 MKRN2OSH3BPM6 223 aa13.94□□□□□ -0.18
PKP4-205ENST00000426248 TMEM127O75204 238 aa13.94□□□□□ -0.18
PKP4-205ENST00000426248 MPZP25189 248 aa13.94□□□□□ -0.18
PKP4-205ENST00000426248 AADACL3Q5VUY0 350 aa13.94□□□□□ -0.18
PKP4-205ENST00000426248 SLC18B1Q6NT16 456 aa13.94□□□□□ -0.18
PKP4-205ENST00000426248 RNF128Q8TEB7 428 aa13.94□□□□□ -0.18
PKP4-205ENST00000426248 STRAPQ9Y3F4 350 aaKnown RBP13.94□□□□□ -0.18
PKP4-205ENST00000426248 PNPP00491 289 aa13.93□□□□□ -0.18
PKP4-205ENST00000426248 DSCR4P56555 118 aaPredicted RBP13.93□□□□□ -0.18
PKP4-205ENST00000426248 HLA-DRB3P79483 266 aa13.93□□□□□ -0.18
PKP4-205ENST00000426248 VHLLQ6RSH7 139 aa13.93□□□□□ -0.18
PKP4-205ENST00000426248 ZNF100Q8IYN0 542 aa13.93□□□□□ -0.18
PKP4-205ENST00000426248 HES7Q9BYE0 225 aa13.93□□□□□ -0.18
PKP4-205ENST00000426248 ADAM19Q9H013 955 aa13.93□□□□□ -0.18
PKP4-205ENST00000426248 GFRA3O60609 400 aa13.93□□□□□ -0.18
PKP4-205ENST00000426248 METTL15P1P0C7V9 234 aa13.93□□□□□ -0.18
PKP4-205ENST00000426248 FMODQ06828 376 aa13.93□□□□□ -0.18
PKP4-205ENST00000426248 PRSS33Q8NF86 280 aa13.93□□□□□ -0.18
PKP4-205ENST00000426248 OR2M3Q8NG83 312 aa13.93□□□□□ -0.18
PKP4-205ENST00000426248 DIRC2Q96SL1 478 aa13.93□□□□□ -0.18
PKP4-205ENST00000426248 ZNF407Q9C0G0 2248 aa13.93□□□□□ -0.18
PKP4-205ENST00000426248 IL2RAP01589 272 aa13.93□□□□□ -0.18
PKP4-205ENST00000426248 HLA-DOBP13765 273 aa13.93□□□□□ -0.18
PKP4-205ENST00000426248 R3HDM4Q96D70 268 aa13.93□□□□□ -0.18
PKP4-205ENST00000426248 TBX15Q96SF7 602 aa13.93□□□□□ -0.18
PKP4-205ENST00000426248 AMELYQ99218 206 aa13.93□□□□□ -0.18
PKP4-205ENST00000426248 CA11O75493 328 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 ERVFC1-1P60608 527 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 TCF15Q12870 199 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 FAHD2BQ6P2I3 314 aaPredicted RBP13.92□□□□□ -0.18
PKP4-205ENST00000426248 TMEM183AQ8IXX5 376 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 TMEM178AQ8NBL3 297 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 BEND2Q8NDZ0 799 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 FAHD2AQ96GK7 314 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 ULBP2Q9BZM5 246 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 IGKV1D-42A0A075B6H8 117 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 LIFP15018 202 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 RND3P61587 244 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 FAM3AP98173 230 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 CDCP2Q5VXM1 449 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 CALHM2Q9HA72 323 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 B3GALT5Q9Y2C3 310 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 OR10A7Q8NGE5 316 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 TXNIPQ9H3M7 391 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 C5orf66Q9H5L9 145 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 FUT9Q9Y231 359 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 MPDZO75970 2070 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 TRBV5-5A0A0J9YX44 114 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 A0A0U1RQK1 487 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 DANCRP0C864 163 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 PRSS12P56730 875 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 SCAND1P57086 179 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 CCL20P78556 96 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 PRR18Q8N4B5 295 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 KCNE4Q8WWG9 221 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 TSPAN32Q96QS1 320 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 SLC17A5Q9NRA2 495 aa13.92□□□□□ -0.18
PKP4-205ENST00000426248 COL4A2P08572 1712 aa13.91□□□□□ -0.18
PKP4-205ENST00000426248 LOC107986453A0A1B0GWG9 222 aa13.91□□□□□ -0.18
PKP4-205ENST00000426248 PRSS37A4D1T9 235 aa13.91□□□□□ -0.18
PKP4-205ENST00000426248 ZNF205O95201 554 aa13.91□□□□□ -0.18
PKP4-205ENST00000426248 ZNF708P17019 499 aa13.91□□□□□ -0.18
PKP4-205ENST00000426248 KIR3DL2P43630 455 aa13.91□□□□□ -0.18
PKP4-205ENST00000426248 EGR4Q05215 589 aa13.91□□□□□ -0.18
PKP4-205ENST00000426248 LCN15Q6UWW0 184 aa13.91□□□□□ -0.18
PKP4-205ENST00000426248 MS4A10Q96PG2 267 aa13.91□□□□□ -0.18
PKP4-205ENST00000426248 MCTS1Q9ULC4 181 aaKnown RBP13.91□□□□□ -0.18
PKP4-205ENST00000426248 KLF13Q9Y2Y9 288 aaPredicted RBP13.91□□□□□ -0.18
PKP4-205ENST00000426248 RFNGQ9Y644 331 aa13.91□□□□□ -0.18
PKP4-205ENST00000426248 SPTBN4Q9H254 2564 aa13.91□□□□□ -0.18
PKP4-205ENST00000426248 SPEGQ15772 3267 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms