RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 LGI3Q8N145 548 aa11.56□□□□□ -0.56
USP42-203ENST00000426246 INTS12Q96CB8 462 aaKnown RBP11.56□□□□□ -0.56
USP42-203ENST00000426246 MOB1AQ9H8S9 216 aa11.56□□□□□ -0.56
USP42-203ENST00000426246 BCO1Q9HAY6 547 aa11.56□□□□□ -0.56
USP42-203ENST00000426246 IGHV1-45A0A0A0MS14 117 aa11.56□□□□□ -0.56
USP42-203ENST00000426246 SNAPC5O75971 98 aa11.56□□□□□ -0.56
USP42-203ENST00000426246 MELTFP08582 738 aa11.56□□□□□ -0.56
USP42-203ENST00000426246 MEOX2P50222 304 aa11.56□□□□□ -0.56
USP42-203ENST00000426246 ARF1P84077 181 aaKnown RBP11.56□□□□□ -0.56
USP42-203ENST00000426246 NAA60Q9H7X0 242 aa11.56□□□□□ -0.56
USP42-203ENST00000426246 PNRC2Q9NPJ4 139 aaKnown RBP11.56□□□□□ -0.56
USP42-203ENST00000426246 LRFN1Q9P244 771 aa11.56□□□□□ -0.56
USP42-203ENST00000426246 COL6A6A6NMZ7 2263 aa11.56□□□□□ -0.56
USP42-203ENST00000426246 METTL15P1P0C7V9 234 aa11.56□□□□□ -0.56
USP42-203ENST00000426246 COX6A1P12074 109 aa11.56□□□□□ -0.56
USP42-203ENST00000426246 MMP9P14780 707 aa11.56□□□□□ -0.56
USP42-203ENST00000426246 MPV17LQ2QL34 196 aa11.56□□□□□ -0.56
USP42-203ENST00000426246 MST1LQ2TV78 715 aa11.56□□□□□ -0.56
USP42-203ENST00000426246 SPANXN5Q5MJ07 72 aa11.56□□□□□ -0.56
USP42-203ENST00000426246 VAX1Q5SQQ9 334 aa11.56□□□□□ -0.56
USP42-203ENST00000426246 ADAMTS17Q8TE56 1095 aa11.56□□□□□ -0.56
USP42-203ENST00000426246 IMMP1LQ96LU5 166 aa11.56□□□□□ -0.56
USP42-203ENST00000426246 GHRLQ9UBU3 117 aa11.56□□□□□ -0.56
USP42-203ENST00000426246 DMXL2Q8TDJ6 3036 aa11.56□□□□□ -0.56
USP42-203ENST00000426246 LAMA5O15230 3695 aa11.56□□□□□ -0.56
USP42-203ENST00000426246 TBPP20226 339 aa11.55□□□□□ -0.56
USP42-203ENST00000426246 THBS4P35443 961 aa11.55□□□□□ -0.56
USP42-203ENST00000426246 RPL23AP62750 156 aaKnown RBP11.55□□□□□ -0.56
USP42-203ENST00000426246 FAM189A2Q15884 450 aa11.55□□□□□ -0.56
USP42-203ENST00000426246 TBC1D26Q86UD7 250 aa11.55□□□□□ -0.56
USP42-203ENST00000426246 TUSC5Q8IXB3 177 aa11.55□□□□□ -0.56
USP42-203ENST00000426246 TPRX1Q8N7U7 411 aa11.55□□□□□ -0.56
USP42-203ENST00000426246 ADPRHL1Q8NDY3 354 aa11.55□□□□□ -0.56
USP42-203ENST00000426246 PP6455Q8WZ26 134 aa11.55□□□□□ -0.56
USP42-203ENST00000426246 PLA2G2EQ9NZK7 142 aa11.55□□□□□ -0.56
USP42-203ENST00000426246 ERRFI1Q9UJM3 462 aaPredicted RBP11.55□□□□□ -0.56
USP42-203ENST00000426246 E5RGE8 158 aa11.55□□□□□ -0.56
USP42-203ENST00000426246 TRAPPC2LH3BP13 241 aa11.55□□□□□ -0.56
USP42-203ENST00000426246 H2AFB1P0C5Y9 115 aa11.55□□□□□ -0.56
USP42-203ENST00000426246 PNLIPRP3Q17RR3 467 aa11.55□□□□□ -0.56
USP42-203ENST00000426246 RFESDQ8TAC1 157 aa11.55□□□□□ -0.56
USP42-203ENST00000426246 PLK3Q9H4B4 646 aa11.55□□□□□ -0.56
USP42-203ENST00000426246 NSG2Q9Y328 171 aa11.55□□□□□ -0.56
USP42-203ENST00000426246 LOXL2Q9Y4K0 774 aa11.55□□□□□ -0.56
USP42-203ENST00000426246 SYNGR1O43759 233 aa11.55□□□□□ -0.56
USP42-203ENST00000426246 CHST1O43916 411 aa11.55□□□□□ -0.56
USP42-203ENST00000426246 ZIC3O60481 467 aa11.55□□□□□ -0.56
USP42-203ENST00000426246 EIF1BO60739 113 aaKnown RBP11.55□□□□□ -0.56
USP42-203ENST00000426246 DEFA4P12838 97 aa11.55□□□□□ -0.56
USP42-203ENST00000426246 CA6P23280 308 aa11.55□□□□□ -0.56
USP42-203ENST00000426246 RSPO1Q2MKA7 263 aaPredicted RBP11.55□□□□□ -0.56
USP42-203ENST00000426246 LILRB2Q8N423 598 aa11.55□□□□□ -0.56
USP42-203ENST00000426246 PSMF1Q92530 271 aa11.55□□□□□ -0.56
USP42-203ENST00000426246 NTNG2Q96CW9 530 aa11.55□□□□□ -0.56
USP42-203ENST00000426246 OCSTAMPQ9BR26 566 aa11.55□□□□□ -0.56
USP42-203ENST00000426246 SEC11CQ9BY50 192 aa11.55□□□□□ -0.56
USP42-203ENST00000426246 OTOGLQ3ZCN5 2332 aa11.55□□□□□ -0.56
USP42-203ENST00000426246 ARGFXA6NJG6 315 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 TMEM127O75204 238 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 PPYP01298 95 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 NR2C1P13056 603 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 LIFP15018 202 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 DYNLT3P51808 116 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 DVL1P1P54792 670 aaPredicted RBP11.54□□□□□ -0.56
USP42-203ENST00000426246 TMPRSS7Q7RTY8 843 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 TIPARPQ7Z3E1 657 aaKnown RBP11.54□□□□□ -0.56
USP42-203ENST00000426246 OR2Y1Q8NGV0 311 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 PTX4Q96A99 478 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 RSG1Q9BU20 258 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 C3orf85A0A1B0GTC6 90 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 FIGNL2A6NMB9 653 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 MSTNO14793 375 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 NAT2P11245 290 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 ATP6V0CP27449 155 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 SULT1A1P50225 295 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 PMP22Q01453 160 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 ALKBH6Q3KRA9 238 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 FAHD2BQ6P2I3 314 aaPredicted RBP11.54□□□□□ -0.56
USP42-203ENST00000426246 DPPA2Q7Z7J5 298 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 FAHD2AQ96GK7 314 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 ZNF816-ZNF321PA0A0X1KG74 233 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 DEFB108AA8MXU0 73 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 LINC00587B1AMM8 73 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 DEDDO75618 318 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 IGHMP01871 453 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 HNF1AP20823 631 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 PTAFRP25105 342 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 CYB561P49447 251 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 CEBPDP49716 269 aaPredicted RBP11.54□□□□□ -0.56
USP42-203ENST00000426246 SUMO3P55854 103 aaPredicted RBP11.54□□□□□ -0.56
USP42-203ENST00000426246 UQCC3Q6UW78 93 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 MKXQ8IYA7 352 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 OR2C3Q8N628 320 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 IL22RA1Q8N6P7 574 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 HSF4Q9ULV5 492 aa11.54□□□□□ -0.56
USP42-203ENST00000426246 CEP295Q9C0D2 2601 aa11.53□□□□□ -0.56
USP42-203ENST00000426246 SMCO3A2RU48 225 aa11.53□□□□□ -0.56
USP42-203ENST00000426246 CYB5BO43169 146 aa11.53□□□□□ -0.56
USP42-203ENST00000426246 DSCR4P56555 118 aaPredicted RBP11.53□□□□□ -0.56
USP42-203ENST00000426246 HIKESHIQ53FT3 197 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms