RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 RGS13O14921 159 aa13.19□□□□□ -0.3
SHOX2-202ENST00000425436 OR2A4O95047 310 aa13.19□□□□□ -0.3
SHOX2-202ENST00000425436 PLATP00750 562 aa13.19□□□□□ -0.3
SHOX2-202ENST00000425436 CSN2P05814 226 aa13.19□□□□□ -0.3
SHOX2-202ENST00000425436 HAAOP46952 286 aa13.19□□□□□ -0.3
SHOX2-202ENST00000425436 PPOXP50336 477 aa13.19□□□□□ -0.3
SHOX2-202ENST00000425436 ZNF81P51508 661 aa13.19□□□□□ -0.3
SHOX2-202ENST00000425436 GPM6AP51674 278 aa13.19□□□□□ -0.3
SHOX2-202ENST00000425436 ATP5J2P56134 94 aa13.19□□□□□ -0.3
SHOX2-202ENST00000425436 RBM11P57052 281 aaKnown RBP13.19□□□□□ -0.3
SHOX2-202ENST00000425436 SURF2Q15527 256 aaPredicted RBP13.19□□□□□ -0.3
SHOX2-202ENST00000425436 MICBQ29980 383 aa13.19□□□□□ -0.3
SHOX2-202ENST00000425436 MPV17LQ2QL34 196 aa13.19□□□□□ -0.3
SHOX2-202ENST00000425436 NKAPLQ5M9Q1 402 aa13.19□□□□□ -0.3
SHOX2-202ENST00000425436 C6orf201Q7Z4U5 140 aa13.19□□□□□ -0.3
SHOX2-202ENST00000425436 HPSE2Q8WWQ2 592 aa13.19□□□□□ -0.3
SHOX2-202ENST00000425436 OR2A7Q96R45 310 aa13.19□□□□□ -0.3
SHOX2-202ENST00000425436 MICU1Q9BPX6 476 aa13.19□□□□□ -0.3
SHOX2-202ENST00000425436 CMSS1Q9BQ75 279 aaKnown RBP13.19□□□□□ -0.3
SHOX2-202ENST00000425436 MS4A5Q9H3V2 200 aa13.19□□□□□ -0.3
SHOX2-202ENST00000425436 SLA2Q9H6Q3 261 aa13.19□□□□□ -0.3
SHOX2-202ENST00000425436 SPACA1Q9HBV2 294 aa13.19□□□□□ -0.3
SHOX2-202ENST00000425436 CCDC168Q8NDH2 2452 aa13.19□□□□□ -0.3
SHOX2-202ENST00000425436 CHD3Q12873 2000 aaKnown RBP13.19□□□□□ -0.3
SHOX2-202ENST00000425436 C17orf100A8MU93 164 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 IQCF6A8MYZ5 107 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 H0YL77 283 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 RGS11O94810 467 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 IGHV4-39P01824 125 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 SFTPBP07988 381 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 FGF12P61328 243 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 IL24Q13007 206 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 LPCAT3Q6P1A2 487 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 TMED4Q7Z7H5 227 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 CALHM1Q8IU99 346 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 C12orf45Q8N5I9 185 aaPredicted RBP13.18□□□□□ -0.3
SHOX2-202ENST00000425436 OR8G5Q8NG78 346 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 OR2AK2Q8NG84 335 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 RTL8AQ9BWD3 113 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 RAB1BQ9H0U4 201 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 PPA2Q9H2U2 334 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 PRRC2AP48634 2157 aaKnown RBP13.18□□□□□ -0.3
SHOX2-202ENST00000425436 GEMIN2O14893 280 aaKnown RBP13.18□□□□□ -0.3
SHOX2-202ENST00000425436 IGHV1-46P01743 117 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 GLAP06280 429 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 C4BPBP20851 252 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 CCL8P80075 99 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 SRSF7Q16629 238 aaKnown RBP eCLIP13.18□□□□□ -0.3
SHOX2-202ENST00000425436 NDUFA5Q16718 116 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 SIGIRRQ6IA17 410 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 LIN54Q6MZP7 749 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 NLRC3Q7RTR2 1065 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 OVCH2Q7RTZ1 564 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 MUC20Q8N307 709 aaPredicted RBP13.18□□□□□ -0.3
SHOX2-202ENST00000425436 OR2Z1Q8NG97 314 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 FAAP24Q9BTP7 215 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 GSX2Q9BZM3 304 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 TMEM100Q9NV29 134 aa13.18□□□□□ -0.3
SHOX2-202ENST00000425436 PAX1P15863 534 aa13.17□□□□□ -0.3
SHOX2-202ENST00000425436 CA6P23280 308 aa13.17□□□□□ -0.3
SHOX2-202ENST00000425436 ARPC4P59998 168 aa13.17□□□□□ -0.3
SHOX2-202ENST00000425436 SPRNQ5BIV9 151 aa13.17□□□□□ -0.3
SHOX2-202ENST00000425436 Q8IYB0 196 aa13.17□□□□□ -0.3
SHOX2-202ENST00000425436 TMEM185AQ8NFB2 350 aa13.17□□□□□ -0.3
SHOX2-202ENST00000425436 OR10AD1Q8NGE0 317 aa13.17□□□□□ -0.3
SHOX2-202ENST00000425436 OR2T35Q8NGX2 323 aa13.17□□□□□ -0.3
SHOX2-202ENST00000425436 AK3Q9UIJ7 227 aa13.17□□□□□ -0.3
SHOX2-202ENST00000425436 FBXO9Q9UK97 447 aaPredicted RBP13.17□□□□□ -0.3
SHOX2-202ENST00000425436 MGAT4AQ9UM21 535 aa13.17□□□□□ -0.3
SHOX2-202ENST00000425436 VSIG4Q9Y279 399 aa13.17□□□□□ -0.3
SHOX2-202ENST00000425436 POLDIP2Q9Y2S7 368 aa13.17□□□□□ -0.3
SHOX2-202ENST00000425436 IGHV3-64DA0A0J9YX35 117 aa13.16□□□□□ -0.3
SHOX2-202ENST00000425436 LRP5LA4QPB2 252 aa13.16□□□□□ -0.3
SHOX2-202ENST00000425436 TMEM210A6NLX4 147 aa13.16□□□□□ -0.3
SHOX2-202ENST00000425436 POM121CA8CG34 1229 aa13.16□□□□□ -0.3
SHOX2-202ENST00000425436 F12P00748 615 aaPredicted RBP13.16□□□□□ -0.3
SHOX2-202ENST00000425436 FPR2P25090 351 aa13.16□□□□□ -0.3
SHOX2-202ENST00000425436 RBMXP38159 391 aaKnown RBP13.16□□□□□ -0.3
SHOX2-202ENST00000425436 EFNA4P52798 201 aa13.16□□□□□ -0.3
SHOX2-202ENST00000425436 IL13RA2Q14627 380 aa13.16□□□□□ -0.3
SHOX2-202ENST00000425436 PIGYQ3MUY2 71 aa13.16□□□□□ -0.3
SHOX2-202ENST00000425436 FAM76BQ5HYJ3 339 aa13.16□□□□□ -0.3
SHOX2-202ENST00000425436 LYG2Q86SG7 212 aa13.16□□□□□ -0.3
SHOX2-202ENST00000425436 ASCC1Q8N9N2 400 aaKnown RBP13.16□□□□□ -0.3
SHOX2-202ENST00000425436 OR13G1Q8NGZ3 307 aa13.16□□□□□ -0.3
SHOX2-202ENST00000425436 PHB2Q99623 299 aa13.16□□□□□ -0.3
SHOX2-202ENST00000425436 TMEM246Q9BRR3 403 aa13.16□□□□□ -0.3
SHOX2-202ENST00000425436 OR51I2Q9H344 312 aa13.16□□□□□ -0.3
SHOX2-202ENST00000425436 RIMS4Q9H426 269 aaPredicted RBP13.16□□□□□ -0.3
SHOX2-202ENST00000425436 EHFQ9NZC4 300 aa13.16□□□□□ -0.3
SHOX2-202ENST00000425436 ANXA10Q9UJ72 324 aa13.16□□□□□ -0.3
SHOX2-202ENST00000425436 GPR132Q9UNW8 380 aa13.16□□□□□ -0.3
SHOX2-202ENST00000425436 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.15□□□□□ -0.3
SHOX2-202ENST00000425436 OR2AT4A6NND4 320 aa13.15□□□□□ -0.3
SHOX2-202ENST00000425436 LYNX1G3V0Z9 82 aa13.15□□□□□ -0.3
SHOX2-202ENST00000425436 J3QT63 122 aa13.15□□□□□ -0.3
SHOX2-202ENST00000425436 MLNRO43193 412 aa13.15□□□□□ -0.3
SHOX2-202ENST00000425436 SLC22A5O76082 557 aa13.15□□□□□ -0.3
SHOX2-202ENST00000425436 OR7C1O76099 320 aaPredicted RBP13.15□□□□□ -0.3
SHOX2-202ENST00000425436 ACAA1P09110 424 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms