RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 GABRPO00591 440 aa13.46□□□□□ -0.25
CCDC78-203ENST00000423653 BAG2O95816 211 aa13.46□□□□□ -0.25
CCDC78-203ENST00000423653 LIMS3P0CW19 117 aa13.46□□□□□ -0.25
CCDC78-203ENST00000423653 LIMS4P0CW20 117 aa13.46□□□□□ -0.25
CCDC78-203ENST00000423653 MYL12AP19105 171 aa13.46□□□□□ -0.25
CCDC78-203ENST00000423653 MNDAP41218 407 aa13.46□□□□□ -0.25
CCDC78-203ENST00000423653 SOX2P48431 317 aa13.46□□□□□ -0.25
CCDC78-203ENST00000423653 RBM39Q14498 530 aaKnown RBP13.46□□□□□ -0.25
CCDC78-203ENST00000423653 BAIAP2L2Q6UXY1 529 aa13.46□□□□□ -0.25
CCDC78-203ENST00000423653 WIPF2Q8TF74 440 aaPredicted RBP13.46□□□□□ -0.25
CCDC78-203ENST00000423653 TMEM106AQ96A25 262 aa13.46□□□□□ -0.25
CCDC78-203ENST00000423653 OR5M11Q96RB7 305 aa13.46□□□□□ -0.25
CCDC78-203ENST00000423653 NR1H4Q96RI1 486 aaPredicted RBP13.46□□□□□ -0.25
CCDC78-203ENST00000423653 SLC25A33Q9BSK2 321 aa13.46□□□□□ -0.25
CCDC78-203ENST00000423653 BARHL1Q9BZE3 327 aa13.46□□□□□ -0.25
CCDC78-203ENST00000423653 PPIL3Q9H2H8 161 aaKnown RBP13.46□□□□□ -0.25
CCDC78-203ENST00000423653 NCOR1P1Q9H4R4 102 aa13.46□□□□□ -0.25
CCDC78-203ENST00000423653 TAS2R4Q9NYW5 299 aa13.46□□□□□ -0.25
CCDC78-203ENST00000423653 MEIKINA0A087WXM9 373 aa13.45□□□□□ -0.26
CCDC78-203ENST00000423653 BUB1B-PAK6H3BSN5 160 aa13.45□□□□□ -0.26
CCDC78-203ENST00000423653 M0QZK8 103 aa13.45□□□□□ -0.26
CCDC78-203ENST00000423653 OR2F2O95006 317 aa13.45□□□□□ -0.26
CCDC78-203ENST00000423653 NFYBP25208 207 aa13.45□□□□□ -0.26
CCDC78-203ENST00000423653 C21orf33P30042 268 aaPredicted RBP13.45□□□□□ -0.26
CCDC78-203ENST00000423653 GDNFP39905 211 aa13.45□□□□□ -0.26
CCDC78-203ENST00000423653 BLCAPP62952 87 aa13.45□□□□□ -0.26
CCDC78-203ENST00000423653 PAX5Q02548 391 aa13.45□□□□□ -0.26
CCDC78-203ENST00000423653 MED21Q13503 144 aa13.45□□□□□ -0.26
CCDC78-203ENST00000423653 TMEM95Q3KNT9 176 aa13.45□□□□□ -0.26
CCDC78-203ENST00000423653 TPTE2P1Q5T6R2 138 aa13.45□□□□□ -0.26
CCDC78-203ENST00000423653 HIST2H2BDQ6DRA6 164 aa13.45□□□□□ -0.26
CCDC78-203ENST00000423653 LYG1Q8N1E2 194 aa13.45□□□□□ -0.26
CCDC78-203ENST00000423653 OR51A2Q8NGJ7 313 aa13.45□□□□□ -0.26
CCDC78-203ENST00000423653 OR9G1Q8NH87 305 aa13.45□□□□□ -0.26
CCDC78-203ENST00000423653 CNIH3Q8TBE1 160 aa13.45□□□□□ -0.26
CCDC78-203ENST00000423653 RGP1Q92546 391 aaPredicted RBP13.45□□□□□ -0.26
CCDC78-203ENST00000423653 RPEQ96AT9 228 aa13.45□□□□□ -0.26
CCDC78-203ENST00000423653 R3HDM4Q96D70 268 aa13.45□□□□□ -0.26
CCDC78-203ENST00000423653 KIRREL1Q96J84 757 aa13.45□□□□□ -0.26
CCDC78-203ENST00000423653 CITED2Q99967 270 aaPredicted RBP13.45□□□□□ -0.26
CCDC78-203ENST00000423653 MMP28Q9H239 520 aa13.45□□□□□ -0.26
CCDC78-203ENST00000423653 PAK1IP1Q9NWT1 392 aaPredicted RBP13.45□□□□□ -0.26
CCDC78-203ENST00000423653 CALYQ9NYX4 217 aa13.45□□□□□ -0.26
CCDC78-203ENST00000423653 KIF25Q9UIL4 384 aa13.45□□□□□ -0.26
CCDC78-203ENST00000423653 KIAA2026Q5HYC2 2103 aa13.45□□□□□ -0.26
CCDC78-203ENST00000423653 TRAV24A0A0B4J272 114 aa13.44□□□□□ -0.26
CCDC78-203ENST00000423653 G3V4G9 280 aa13.44□□□□□ -0.26
CCDC78-203ENST00000423653 WBP4O75554 376 aaKnown RBP13.44□□□□□ -0.26
CCDC78-203ENST00000423653 IL1AP01583 271 aa13.44□□□□□ -0.26
CCDC78-203ENST00000423653 OR3A4PP47883 348 aa13.44□□□□□ -0.26
CCDC78-203ENST00000423653 GTF2A1P52655 376 aaPredicted RBP13.44□□□□□ -0.26
CCDC78-203ENST00000423653 SMN1Q16637 294 aaKnown RBP13.44□□□□□ -0.26
CCDC78-203ENST00000423653 C17orf58Q2M2W7 97 aa13.44□□□□□ -0.26
CCDC78-203ENST00000423653 BEAN1Q3B7T3 259 aa13.44□□□□□ -0.26
CCDC78-203ENST00000423653 SAMD5Q5TGI4 173 aa13.44□□□□□ -0.26
CCDC78-203ENST00000423653 SETD9Q8NE22 299 aa13.44□□□□□ -0.26
CCDC78-203ENST00000423653 TOMM40LQ969M1 308 aa13.44□□□□□ -0.26
CCDC78-203ENST00000423653 SMIM19Q96E16 107 aa13.44□□□□□ -0.26
CCDC78-203ENST00000423653 S100A13Q99584 98 aa13.44□□□□□ -0.26
CCDC78-203ENST00000423653 TMEM138Q9NPI0 162 aa13.44□□□□□ -0.26
CCDC78-203ENST00000423653 C8orf4Q9NR00 106 aa13.44□□□□□ -0.26
CCDC78-203ENST00000423653 IL36GQ9NZH8 169 aa13.44□□□□□ -0.26
CCDC78-203ENST00000423653 DIMT1Q9UNQ2 313 aaKnown RBP13.44□□□□□ -0.26
CCDC78-203ENST00000423653 EXOSC1Q9Y3B2 195 aaKnown RBP13.44□□□□□ -0.26
CCDC78-203ENST00000423653 TGP01266 2768 aa13.43□□□□□ -0.26
CCDC78-203ENST00000423653 HTR3BO95264 441 aa13.43□□□□□ -0.26
CCDC78-203ENST00000423653 CSTBP04080 98 aaKnown RBP13.43□□□□□ -0.26
CCDC78-203ENST00000423653 ETV1P50549 477 aa13.43□□□□□ -0.26
CCDC78-203ENST00000423653 PIGYQ3MUY2 71 aa13.43□□□□□ -0.26
CCDC78-203ENST00000423653 NHLRC3Q5JS37 347 aa13.43□□□□□ -0.26
CCDC78-203ENST00000423653 KPRPQ5T749 579 aaPredicted RBP13.43□□□□□ -0.26
CCDC78-203ENST00000423653 DDI2Q5TDH0 399 aa13.43□□□□□ -0.26
CCDC78-203ENST00000423653 REC114Q7Z4M0 266 aa13.43□□□□□ -0.26
CCDC78-203ENST00000423653 LINC00596Q86U02 117 aa13.43□□□□□ -0.26
CCDC78-203ENST00000423653 Q8NFD4 153 aa13.43□□□□□ -0.26
CCDC78-203ENST00000423653 OR10K1Q8NGX5 313 aa13.43□□□□□ -0.26
CCDC78-203ENST00000423653 RBM14Q96PK6 669 aaKnown RBP13.43□□□□□ -0.26
CCDC78-203ENST00000423653 METTL9Q9H1A3 318 aa13.43□□□□□ -0.26
CCDC78-203ENST00000423653 CHCHD3Q9NX63 227 aaKnown RBP13.43□□□□□ -0.26
CCDC78-203ENST00000423653 IDI2-AS1Q9NZ38 188 aa13.43□□□□□ -0.26
CCDC78-203ENST00000423653 CKLFQ9UBR5 152 aa13.43□□□□□ -0.26
CCDC78-203ENST00000423653 ZNF281Q9Y2X9 895 aa13.43□□□□□ -0.26
CCDC78-203ENST00000423653 PLXNB1O43157 2135 aa13.43□□□□□ -0.26
CCDC78-203ENST00000423653 OR7C1O76099 320 aaPredicted RBP13.42□□□□□ -0.26
CCDC78-203ENST00000423653 FAM106CPP0CH98 169 aa13.42□□□□□ -0.26
CCDC78-203ENST00000423653 CD24P25063 80 aa13.42□□□□□ -0.26
CCDC78-203ENST00000423653 BDKRB2P30411 391 aa13.42□□□□□ -0.26
CCDC78-203ENST00000423653 ZNF93P35789 620 aaPredicted RBP13.42□□□□□ -0.26
CCDC78-203ENST00000423653 RBM11P57052 281 aaKnown RBP13.42□□□□□ -0.26
CCDC78-203ENST00000423653 MADCAM1Q13477 382 aa13.42□□□□□ -0.26
CCDC78-203ENST00000423653 ABCA11PQ4W5N1 156 aa13.42□□□□□ -0.26
CCDC78-203ENST00000423653 OR2G6Q5TZ20 316 aa13.42□□□□□ -0.26
CCDC78-203ENST00000423653 RSBN1Q5VWQ0 802 aaPredicted RBP13.42□□□□□ -0.26
CCDC78-203ENST00000423653 TTC23Q5W5X9 447 aa13.42□□□□□ -0.26
CCDC78-203ENST00000423653 XAF1Q6GPH4 301 aa13.42□□□□□ -0.26
CCDC78-203ENST00000423653 ASCL4Q6XD76 172 aa13.42□□□□□ -0.26
CCDC78-203ENST00000423653 Q6ZS46 218 aa13.42□□□□□ -0.26
CCDC78-203ENST00000423653 OR5AU1Q8NGC0 362 aa13.42□□□□□ -0.26
CCDC78-203ENST00000423653 OR10A7Q8NGE5 316 aa13.42□□□□□ -0.26
CCDC78-203ENST00000423653 OR4X2Q8NGF9 303 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms