RNA–Protein interactions for RNA: ENST00000422797.5

LIMS1-207, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene LIMS1, Length 1,544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-207ENST00000422797 CLDND2Q8NHS1 167 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 EXTL1Q92935 676 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 SGCZQ96LD1 299 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 OR2H1Q9GZK4 316 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 Q9N2K0 584 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 SH2D2AQ9NP31 389 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 CISD1Q9NZ45 108 aaKnown RBP9.51□□□□□ -0.89
LIMS1-207ENST00000422797 RP1P56715 2156 aa9.5□□□□□ -0.89
LIMS1-207ENST00000422797 IGKV1-12A0A0C4DH73 117 aa9.5□□□□□ -0.89
LIMS1-207ENST00000422797 ADAM20O43506 726 aa9.5□□□□□ -0.89
LIMS1-207ENST00000422797 ZIC3O60481 467 aa9.5□□□□□ -0.89
LIMS1-207ENST00000422797 PTBP3O95758 552 aaKnown RBP9.5□□□□□ -0.89
LIMS1-207ENST00000422797 NAPSAO96009 420 aa9.5□□□□□ -0.89
LIMS1-207ENST00000422797 IGKV1D-12P01611 117 aa9.5□□□□□ -0.89
LIMS1-207ENST00000422797 OPN1MWP04001 364 aa9.5□□□□□ -0.89
LIMS1-207ENST00000422797 OPN1MW2P0DN77 364 aa9.5□□□□□ -0.89
LIMS1-207ENST00000422797 OPN1MW3P0DN78 364 aa9.5□□□□□ -0.89
LIMS1-207ENST00000422797 FGF5P12034 268 aa9.5□□□□□ -0.89
LIMS1-207ENST00000422797 KLK2P20151 261 aa9.5□□□□□ -0.89
LIMS1-207ENST00000422797 ITGA3P26006 1051 aa9.5□□□□□ -0.89
LIMS1-207ENST00000422797 GNRHRP30968 328 aa9.5□□□□□ -0.89
LIMS1-207ENST00000422797 NPBWR2P48146 333 aa9.5□□□□□ -0.89
LIMS1-207ENST00000422797 NOVA1P51513 510 aaKnown RBP9.5□□□□□ -0.89
LIMS1-207ENST00000422797 DYNLT3P51808 116 aa9.5□□□□□ -0.89
LIMS1-207ENST00000422797 ZNF92Q03936 586 aa9.5□□□□□ -0.89
LIMS1-207ENST00000422797 IGSF11Q5DX21 431 aa9.5□□□□□ -0.89
LIMS1-207ENST00000422797 OR2B11Q5JQS5 317 aa9.5□□□□□ -0.89
LIMS1-207ENST00000422797 ABLIM2Q6H8Q1 611 aa9.5□□□□□ -0.89
LIMS1-207ENST00000422797 OR2AE1Q8NHA4 323 aa9.5□□□□□ -0.89
LIMS1-207ENST00000422797 NAT6Q93015 286 aa9.5□□□□□ -0.89
LIMS1-207ENST00000422797 SLAMF9Q96A28 289 aa9.5□□□□□ -0.89
LIMS1-207ENST00000422797 RARRES2Q99969 163 aa9.5□□□□□ -0.89
LIMS1-207ENST00000422797 C1QTNF5Q9BXJ0 243 aa9.5□□□□□ -0.89
LIMS1-207ENST00000422797 DOK5Q9P104 306 aa9.5□□□□□ -0.89
LIMS1-207ENST00000422797 CHD9Q3L8U1 2897 aa9.5□□□□□ -0.89
LIMS1-207ENST00000422797 CHD7Q9P2D1 2997 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 IGHV1-45A0A0A0MS14 117 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 A0A0J9YW62 118 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 C9J4A7 227 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 PROB1E7EW31 1015 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 CLDN34H7C241 214 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 GPR37O15354 613 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 OR7C1O76099 320 aaPredicted RBP9.49□□□□□ -0.89
LIMS1-207ENST00000422797 TIAF1O95411 115 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 CYB5R3P00387 301 aaPredicted RBP9.49□□□□□ -0.89
LIMS1-207ENST00000422797 IGHEP01854 428 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 COX5BP10606 129 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 ZNF32P17041 273 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 NDUFA6P56556 154 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 FGF12P61328 243 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 SERF2P84101 59 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 DEFA6Q01524 100 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 TGIF1Q15583 401 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 SPIN3Q5JUX0 258 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 ZNF574Q6ZN55 896 aaPredicted RBP9.49□□□□□ -0.89
LIMS1-207ENST00000422797 AAED1Q7RTV5 226 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.49□□□□□ -0.89
LIMS1-207ENST00000422797 DTX1Q86Y01 620 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 MKXQ8IYA7 352 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 DEFB123Q8N688 67 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 ZNF611Q8N823 705 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 CYB561D1Q8N8Q1 229 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 SCGB1C1Q8TD33 95 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 Q8WTZ3 238 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 TMEM171Q8WVE6 324 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 MBD3L1Q8WWY6 194 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 EDARADDQ8WWZ3 215 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 TMEM45BQ96B21 275 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 PINX1Q96BK5 328 aaKnown RBP9.49□□□□□ -0.89
LIMS1-207ENST00000422797 CYYR1Q96J86 154 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 SIGLEC12Q96PQ1 595 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 UCN2Q96RP3 112 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 FOXB1Q99853 325 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 SLC7A10Q9NS82 523 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 MRPS18CQ9Y3D5 142 aaKnown RBP9.49□□□□□ -0.89
LIMS1-207ENST00000422797 MMP24Q9Y5R2 645 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 LIPGQ9Y5X9 500 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 FER1L5A0AVI2 2057 aa9.49□□□□□ -0.89
LIMS1-207ENST00000422797 PCDH15Q96QU1 1955 aa9.48□□□□□ -0.89
LIMS1-207ENST00000422797 TRBV24-1A0A075B6N3 115 aa9.48□□□□□ -0.89
LIMS1-207ENST00000422797 IGHV5-10-1A0A0J9YXX1 117 aa9.48□□□□□ -0.89
LIMS1-207ENST00000422797 CDRT15L2A8MXV6 281 aa9.48□□□□□ -0.89
LIMS1-207ENST00000422797 CNOT4O95628 575 aaKnown RBP9.48□□□□□ -0.89
LIMS1-207ENST00000422797 BCL2P10415 239 aa9.48□□□□□ -0.89
LIMS1-207ENST00000422797 HIST1H1BP16401 226 aaKnown RBP9.48□□□□□ -0.89
LIMS1-207ENST00000422797 CD200P41217 278 aa9.48□□□□□ -0.89
LIMS1-207ENST00000422797 HBG1P69891 147 aa9.48□□□□□ -0.89
LIMS1-207ENST00000422797 HBG2P69892 147 aa9.48□□□□□ -0.89
LIMS1-207ENST00000422797 HAGHQ16775 308 aa9.48□□□□□ -0.89
LIMS1-207ENST00000422797 TRIM61Q5EBN2 209 aa9.48□□□□□ -0.89
LIMS1-207ENST00000422797 NCMAPQ5T1S8 102 aa9.48□□□□□ -0.89
LIMS1-207ENST00000422797 SLC25A24Q6NUK1 477 aa9.48□□□□□ -0.89
LIMS1-207ENST00000422797 OR2V1Q8NHB1 315 aa9.48□□□□□ -0.89
LIMS1-207ENST00000422797 AKR7LQ8NHP1 331 aa9.48□□□□□ -0.89
LIMS1-207ENST00000422797 LSM10Q969L4 123 aaKnown RBP9.48□□□□□ -0.89
LIMS1-207ENST00000422797 RCC1LQ96I51 464 aaKnown RBP9.48□□□□□ -0.89
LIMS1-207ENST00000422797 IMMP1LQ96LU5 166 aa9.48□□□□□ -0.89
LIMS1-207ENST00000422797 CCDC74BQ96LY2 380 aa9.48□□□□□ -0.89
LIMS1-207ENST00000422797 WNT5BQ9H1J7 359 aa9.48□□□□□ -0.89
LIMS1-207ENST00000422797 CRLF2Q9HC73 371 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms