RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 NEK7Q8TDX7 302 aa13.57□□□□□ -0.24
CDH1-202ENST00000422392 C1QTNF5Q9BXJ0 243 aa13.57□□□□□ -0.24
CDH1-202ENST00000422392 RPL36A-HNRNPH2H7BZ11 118 aa13.56□□□□□ -0.24
CDH1-202ENST00000422392 LINC01387J3KSC0 135 aa13.56□□□□□ -0.24
CDH1-202ENST00000422392 K7N7A8 449 aa13.56□□□□□ -0.24
CDH1-202ENST00000422392 CELA3AP09093 270 aa13.56□□□□□ -0.24
CDH1-202ENST00000422392 PRDX4Q13162 271 aa13.56□□□□□ -0.24
CDH1-202ENST00000422392 EIF2S3LQ2VIR3 472 aaKnown RBP13.56□□□□□ -0.24
CDH1-202ENST00000422392 TRIM61Q5EBN2 209 aa13.56□□□□□ -0.24
CDH1-202ENST00000422392 SLC16A13Q7RTY0 426 aa13.56□□□□□ -0.24
CDH1-202ENST00000422392 OR2G3Q8NGZ4 309 aa13.56□□□□□ -0.24
CDH1-202ENST00000422392 PRRG4Q9BZD6 226 aa13.56□□□□□ -0.24
CDH1-202ENST00000422392 ZNF391Q9UJN7 358 aa13.56□□□□□ -0.24
CDH1-202ENST00000422392 NOSIPQ9Y314 301 aaKnown RBP13.56□□□□□ -0.24
CDH1-202ENST00000422392 C5orf49A4QMS7 147 aa13.56□□□□□ -0.24
CDH1-202ENST00000422392 LMO1P25800 156 aa13.56□□□□□ -0.24
CDH1-202ENST00000422392 SULT1A1P50225 295 aa13.56□□□□□ -0.24
CDH1-202ENST00000422392 CEBPGP53567 150 aa13.56□□□□□ -0.24
CDH1-202ENST00000422392 OR2B8PP59922 312 aa13.56□□□□□ -0.24
CDH1-202ENST00000422392 ARF1P84077 181 aaKnown RBP13.56□□□□□ -0.24
CDH1-202ENST00000422392 RUNX1Q01196 453 aa13.56□□□□□ -0.24
CDH1-202ENST00000422392 HMGN3Q15651 99 aa13.56□□□□□ -0.24
CDH1-202ENST00000422392 IGFBP7Q16270 282 aa13.56□□□□□ -0.24
CDH1-202ENST00000422392 RIPPLY2Q5TAB7 128 aa13.56□□□□□ -0.24
CDH1-202ENST00000422392 C11orf1Q9H5F2 150 aa13.56□□□□□ -0.24
CDH1-202ENST00000422392 KCNJ16Q9NPI9 418 aa13.56□□□□□ -0.24
CDH1-202ENST00000422392 GLRX2Q9NS18 164 aa13.56□□□□□ -0.24
CDH1-202ENST00000422392 TCFL5Q9UL49 500 aa13.56□□□□□ -0.24
CDH1-202ENST00000422392 PUS1Q9Y606 427 aaKnown RBP eCLIP13.56□□□□□ -0.24
CDH1-202ENST00000422392 PROB1E7EW31 1015 aa13.55□□□□□ -0.24
CDH1-202ENST00000422392 CYTIPO60759 359 aa13.55□□□□□ -0.24
CDH1-202ENST00000422392 MRPL33O75394 65 aaKnown RBP13.55□□□□□ -0.24
CDH1-202ENST00000422392 TMEM50AO95807 157 aa13.55□□□□□ -0.24
CDH1-202ENST00000422392 S100A6P06703 90 aa13.55□□□□□ -0.24
CDH1-202ENST00000422392 ADAM5Q6NVV9 412 aa13.55□□□□□ -0.24
CDH1-202ENST00000422392 SELENOHQ8IZQ5 122 aaKnown RBP13.55□□□□□ -0.24
CDH1-202ENST00000422392 OR5C1Q8NGR4 320 aa13.55□□□□□ -0.24
CDH1-202ENST00000422392 LILRB1Q8NHL6 650 aaPredicted RBP13.55□□□□□ -0.24
CDH1-202ENST00000422392 SPSB4Q96A44 273 aa13.55□□□□□ -0.24
CDH1-202ENST00000422392 ZNF488Q96MN9 340 aa13.55□□□□□ -0.24
CDH1-202ENST00000422392 SLC35B3Q9H1N7 401 aa13.55□□□□□ -0.24
CDH1-202ENST00000422392 CCL28Q9NRJ3 127 aa13.55□□□□□ -0.24
CDH1-202ENST00000422392 MTCH1Q9NZJ7 389 aa13.55□□□□□ -0.24
CDH1-202ENST00000422392 NGFP01138 241 aa13.55□□□□□ -0.24
CDH1-202ENST00000422392 MT-ND4LP03901 98 aa13.55□□□□□ -0.24
CDH1-202ENST00000422392 IFNA4P05014 189 aa13.55□□□□□ -0.24
CDH1-202ENST00000422392 EPHA1P21709 976 aa13.55□□□□□ -0.24
CDH1-202ENST00000422392 CTAG1AP78358 180 aa13.55□□□□□ -0.24
CDH1-202ENST00000422392 ODF3L1Q8IXM7 274 aa13.55□□□□□ -0.24
CDH1-202ENST00000422392 COMMD1Q8N668 190 aa13.55□□□□□ -0.24
CDH1-202ENST00000422392 ZNF565Q8N9K5 539 aa13.55□□□□□ -0.24
CDH1-202ENST00000422392 NANPQ8TBE9 248 aa13.55□□□□□ -0.24
CDH1-202ENST00000422392 HES7Q9BYE0 225 aa13.55□□□□□ -0.24
CDH1-202ENST00000422392 CALHM2Q9HA72 323 aa13.55□□□□□ -0.24
CDH1-202ENST00000422392 Q9N2K0 584 aa13.55□□□□□ -0.24
CDH1-202ENST00000422392 STRAPQ9Y3F4 350 aaKnown RBP13.55□□□□□ -0.24
CDH1-202ENST00000422392 IGKV1-6A0A0C4DH72 117 aa13.54□□□□□ -0.24
CDH1-202ENST00000422392 C5orf52A6NGY3 159 aa13.54□□□□□ -0.24
CDH1-202ENST00000422392 SLC22A20A6NK97 555 aa13.54□□□□□ -0.24
CDH1-202ENST00000422392 SYNGR1O43759 233 aa13.54□□□□□ -0.24
CDH1-202ENST00000422392 PAX6P26367 422 aa13.54□□□□□ -0.24
CDH1-202ENST00000422392 CYB561P49447 251 aa13.54□□□□□ -0.24
CDH1-202ENST00000422392 GFRA1P56159 465 aa13.54□□□□□ -0.24
CDH1-202ENST00000422392 TIPARPQ7Z3E1 657 aaKnown RBP13.54□□□□□ -0.24
CDH1-202ENST00000422392 TMEM252Q8N6L7 170 aa13.54□□□□□ -0.24
CDH1-202ENST00000422392 OR51B6Q9H340 312 aa13.54□□□□□ -0.24
CDH1-202ENST00000422392 R4GN57 208 aa13.54□□□□□ -0.24
CDH1-202ENST00000422392 SPENQ96T58 3664 aaKnown RBP13.54□□□□□ -0.24
CDH1-202ENST00000422392 ATXN7O15265 892 aaPredicted RBP13.54□□□□□ -0.24
CDH1-202ENST00000422392 CDS2O95674 445 aa13.54□□□□□ -0.24
CDH1-202ENST00000422392 TK1P04183 234 aa13.54□□□□□ -0.24
CDH1-202ENST00000422392 ZNF14P17017 642 aaPredicted RBP13.54□□□□□ -0.24
CDH1-202ENST00000422392 DYNLT3P51808 116 aa13.54□□□□□ -0.24
CDH1-202ENST00000422392 C20orf204Q6ZNR8 217 aa13.54□□□□□ -0.24
CDH1-202ENST00000422392 TUSC5Q8IXB3 177 aa13.54□□□□□ -0.24
CDH1-202ENST00000422392 CPNE4Q96A23 557 aaPredicted RBP13.54□□□□□ -0.24
CDH1-202ENST00000422392 PRDM14Q9GZV8 571 aa13.54□□□□□ -0.24
CDH1-202ENST00000422392 ZNF552Q9H707 407 aaPredicted RBP13.54□□□□□ -0.24
CDH1-202ENST00000422392 PRDM6Q9NQX0 595 aa13.54□□□□□ -0.24
CDH1-202ENST00000422392 ZNF732B4DXR9 585 aa13.53□□□□□ -0.24
CDH1-202ENST00000422392 FBP1P09467 338 aa13.53□□□□□ -0.24
CDH1-202ENST00000422392 RAB5CP51148 216 aa13.53□□□□□ -0.24
CDH1-202ENST00000422392 FOXO1Q12778 655 aa13.53□□□□□ -0.24
CDH1-202ENST00000422392 LPAL2Q16609 132 aa13.53□□□□□ -0.24
CDH1-202ENST00000422392 TMEM56Q96MV1 263 aa13.53□□□□□ -0.24
CDH1-202ENST00000422392 REPIN1Q9BWE0 567 aaKnown RBP13.53□□□□□ -0.24
CDH1-202ENST00000422392 PLSCR2Q9NRY7 297 aa13.53□□□□□ -0.24
CDH1-202ENST00000422392 TMEM56-RWDD3S4R434 201 aa13.53□□□□□ -0.24
CDH1-202ENST00000422392 ARHGAP21Q5T5U3 1957 aa13.53□□□□□ -0.24
CDH1-202ENST00000422392 H3BP45 60 aa13.53□□□□□ -0.24
CDH1-202ENST00000422392 LILRA1O75019 489 aa13.53□□□□□ -0.24
CDH1-202ENST00000422392 NAPSAO96009 420 aa13.53□□□□□ -0.24
CDH1-202ENST00000422392 RAB5AP20339 215 aa13.53□□□□□ -0.24
CDH1-202ENST00000422392 AGAP20933 346 aa13.53□□□□□ -0.24
CDH1-202ENST00000422392 FABP9Q0Z7S8 132 aa13.53□□□□□ -0.24
CDH1-202ENST00000422392 ZNF154Q13106 437 aa13.53□□□□□ -0.24
CDH1-202ENST00000422392 HAGHQ16775 308 aa13.53□□□□□ -0.24
CDH1-202ENST00000422392 IZUMO4Q1ZYL8 232 aa13.53□□□□□ -0.24
CDH1-202ENST00000422392 COLCA1Q6ZS62 124 aa13.53□□□□□ -0.24
CDH1-202ENST00000422392 PBDC1Q9BVG4 233 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms