RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 AHSA2Q719I0 299 aa13.29□□□□□ -0.28
LINC00404-201ENST00000418660 NDNFQ8TB73 568 aa13.29□□□□□ -0.28
LINC00404-201ENST00000418660 NKX3-1Q99801 234 aaPredicted RBP13.29□□□□□ -0.28
LINC00404-201ENST00000418660 BARHL1Q9BZE3 327 aa13.29□□□□□ -0.28
LINC00404-201ENST00000418660 NPFFR1Q9GZQ6 430 aa13.29□□□□□ -0.28
LINC00404-201ENST00000418660 PPIL3Q9H2H8 161 aaKnown RBP13.29□□□□□ -0.28
LINC00404-201ENST00000418660 FKBP14Q9NWM8 211 aa13.29□□□□□ -0.28
LINC00404-201ENST00000418660 CKLFQ9UBR5 152 aa13.29□□□□□ -0.28
LINC00404-201ENST00000418660 NKX1-2Q9UD57 310 aaPredicted RBP13.29□□□□□ -0.28
LINC00404-201ENST00000418660 PITPNC1Q9UKF7 332 aa13.29□□□□□ -0.28
LINC00404-201ENST00000418660 HILPDAQ9Y5L2 63 aa13.29□□□□□ -0.28
LINC00404-201ENST00000418660 MEGF11A6BM72 1044 aa13.28□□□□□ -0.28
LINC00404-201ENST00000418660 A6NDX4 124 aa13.28□□□□□ -0.28
LINC00404-201ENST00000418660 HSPB6O14558 160 aa13.28□□□□□ -0.28
LINC00404-201ENST00000418660 MYL12BO14950 172 aa13.28□□□□□ -0.28
LINC00404-201ENST00000418660 CSTBP04080 98 aaKnown RBP13.28□□□□□ -0.28
LINC00404-201ENST00000418660 CD1AP06126 327 aa13.28□□□□□ -0.28
LINC00404-201ENST00000418660 CD34P28906 385 aa13.28□□□□□ -0.28
LINC00404-201ENST00000418660 GDNFP39905 211 aa13.28□□□□□ -0.28
LINC00404-201ENST00000418660 KCNJ3P48549 501 aa13.28□□□□□ -0.28
LINC00404-201ENST00000418660 EFNB2P52799 333 aa13.28□□□□□ -0.28
LINC00404-201ENST00000418660 BDH1Q02338 343 aa13.28□□□□□ -0.28
LINC00404-201ENST00000418660 NHLRC3Q5JS37 347 aa13.28□□□□□ -0.28
LINC00404-201ENST00000418660 CCBE1Q6UXH8 406 aaPredicted RBP13.28□□□□□ -0.28
LINC00404-201ENST00000418660 BAIAP2L2Q6UXY1 529 aa13.28□□□□□ -0.28
LINC00404-201ENST00000418660 OSR2Q8N2R0 312 aa13.28□□□□□ -0.28
LINC00404-201ENST00000418660 NANOGP1Q8N7R0 232 aa13.28□□□□□ -0.28
LINC00404-201ENST00000418660 ZNF565Q8N9K5 539 aa13.28□□□□□ -0.28
LINC00404-201ENST00000418660 OR4D6Q8NGJ1 314 aa13.28□□□□□ -0.28
LINC00404-201ENST00000418660 OR4P4Q8NGL7 312 aa13.28□□□□□ -0.28
LINC00404-201ENST00000418660 OR2T6Q8NHC8 308 aa13.28□□□□□ -0.28
LINC00404-201ENST00000418660 ZNF596Q8TC21 504 aa13.28□□□□□ -0.28
LINC00404-201ENST00000418660 S100A13Q99584 98 aa13.28□□□□□ -0.28
LINC00404-201ENST00000418660 ZNF184Q99676 751 aaPredicted RBP13.28□□□□□ -0.28
LINC00404-201ENST00000418660 PCDHB16Q9NRJ7 776 aa13.28□□□□□ -0.28
LINC00404-201ENST00000418660 PAK1IP1Q9NWT1 392 aaPredicted RBP13.28□□□□□ -0.28
LINC00404-201ENST00000418660 DPM3Q9P2X0 92 aa13.28□□□□□ -0.28
LINC00404-201ENST00000418660 ST3GAL6Q9Y274 331 aa13.28□□□□□ -0.28
LINC00404-201ENST00000418660 SIGLEC9Q9Y336 463 aa13.28□□□□□ -0.28
LINC00404-201ENST00000418660 MGAM2Q2M2H8 2515 aa13.27□□□□□ -0.29
LINC00404-201ENST00000418660 TRAV8-7A0A075B6U6 113 aa13.27□□□□□ -0.29
LINC00404-201ENST00000418660 MEIKINA0A087WXM9 373 aa13.27□□□□□ -0.29
LINC00404-201ENST00000418660 A0A087X0M5 115 aa13.27□□□□□ -0.29
LINC00404-201ENST00000418660 TRBV5-7A0A0A0MS05 114 aa13.27□□□□□ -0.29
LINC00404-201ENST00000418660 KBTBD11-OT1A0A1B0GTJ5 212 aa13.27□□□□□ -0.29
LINC00404-201ENST00000418660 A0A1B0GX30 115 aa13.27□□□□□ -0.29
LINC00404-201ENST00000418660 IGLV1-47P01700 117 aa13.27□□□□□ -0.29
LINC00404-201ENST00000418660 CGB3P0DN86 165 aa13.27□□□□□ -0.29
LINC00404-201ENST00000418660 CGB7P0DN87 165 aa13.27□□□□□ -0.29
LINC00404-201ENST00000418660 CELP19835 753 aa13.27□□□□□ -0.29
LINC00404-201ENST00000418660 FSTP19883 344 aa13.27□□□□□ -0.29
LINC00404-201ENST00000418660 PAX5Q02548 391 aa13.27□□□□□ -0.29
LINC00404-201ENST00000418660 C17orf58Q2M2W7 97 aa13.27□□□□□ -0.29
LINC00404-201ENST00000418660 OR14A2Q96R54 314 aa13.27□□□□□ -0.29
LINC00404-201ENST00000418660 IFT22Q9H7X7 185 aa13.27□□□□□ -0.29
LINC00404-201ENST00000418660 KIF25Q9UIL4 384 aa13.27□□□□□ -0.29
LINC00404-201ENST00000418660 ERGIC3Q9Y282 383 aa13.27□□□□□ -0.29
LINC00404-201ENST00000418660 PNMA8CA0A1B0GUJ8 204 aa13.26□□□□□ -0.29
LINC00404-201ENST00000418660 LEUTXA8MZ59 168 aa13.26□□□□□ -0.29
LINC00404-201ENST00000418660 F2RL2O00254 374 aa13.26□□□□□ -0.29
LINC00404-201ENST00000418660 ZNF780AO75290 641 aaPredicted RBP13.26□□□□□ -0.29
LINC00404-201ENST00000418660 JUNBP17275 347 aaPredicted RBP13.26□□□□□ -0.29
LINC00404-201ENST00000418660 PRRX1P54821 245 aa13.26□□□□□ -0.29
LINC00404-201ENST00000418660 RBM11P57052 281 aaKnown RBP13.26□□□□□ -0.29
LINC00404-201ENST00000418660 RSBN1Q5VWQ0 802 aaPredicted RBP13.26□□□□□ -0.29
LINC00404-201ENST00000418660 RNLSQ5VYX0 342 aa13.26□□□□□ -0.29
LINC00404-201ENST00000418660 LINC00596Q86U02 117 aa13.26□□□□□ -0.29
LINC00404-201ENST00000418660 CDH26Q8IXH8 852 aa13.26□□□□□ -0.29
LINC00404-201ENST00000418660 SUMF2Q8NBJ7 301 aa13.26□□□□□ -0.29
LINC00404-201ENST00000418660 OR13A1Q8NGR1 328 aa13.26□□□□□ -0.29
LINC00404-201ENST00000418660 CREB3L1Q96BA8 519 aa13.26□□□□□ -0.29
LINC00404-201ENST00000418660 ZNF286AQ9HBT8 521 aa13.26□□□□□ -0.29
LINC00404-201ENST00000418660 FOXJ3Q9UPW0 622 aa13.26□□□□□ -0.29
LINC00404-201ENST00000418660 A0A1W2PPK0 400 aa13.25□□□□□ -0.29
LINC00404-201ENST00000418660 FAM172BPA6NC97 362 aa13.25□□□□□ -0.29
LINC00404-201ENST00000418660 MAGEA13PA6NCF6 341 aa13.25□□□□□ -0.29
LINC00404-201ENST00000418660 FAM90A22PA8MWA6 464 aa13.25□□□□□ -0.29
LINC00404-201ENST00000418660 H3BUI4 141 aa13.25□□□□□ -0.29
LINC00404-201ENST00000418660 TOR1AO14656 332 aa13.25□□□□□ -0.29
LINC00404-201ENST00000418660 OR7C1O76099 320 aaPredicted RBP13.25□□□□□ -0.29
LINC00404-201ENST00000418660 CDK1P06493 297 aa13.25□□□□□ -0.29
LINC00404-201ENST00000418660 SERPINA2P20848 420 aa13.25□□□□□ -0.29
LINC00404-201ENST00000418660 CEACAM3P40198 252 aa13.25□□□□□ -0.29
LINC00404-201ENST00000418660 GLP1RP43220 463 aa13.25□□□□□ -0.29
LINC00404-201ENST00000418660 DOC2BQ14184 412 aa13.25□□□□□ -0.29
LINC00404-201ENST00000418660 GPR176Q14439 515 aa13.25□□□□□ -0.29
LINC00404-201ENST00000418660 HERPUD1Q15011 391 aa13.25□□□□□ -0.29
LINC00404-201ENST00000418660 C6orf141Q5SZD1 244 aa13.25□□□□□ -0.29
LINC00404-201ENST00000418660 TMEM219Q86XT9 240 aa13.25□□□□□ -0.29
LINC00404-201ENST00000418660 Q8N2B8 174 aa13.25□□□□□ -0.29
LINC00404-201ENST00000418660 PLPPR1Q8TBJ4 325 aa13.25□□□□□ -0.29
LINC00404-201ENST00000418660 THRSPQ92748 146 aa13.25□□□□□ -0.29
LINC00404-201ENST00000418660 DERL3Q96Q80 235 aa13.25□□□□□ -0.29
LINC00404-201ENST00000418660 DPCDQ9BVM2 203 aaPredicted RBP13.25□□□□□ -0.29
LINC00404-201ENST00000418660 LINC00574Q9H8X3 128 aa13.25□□□□□ -0.29
LINC00404-201ENST00000418660 ZNF702PQ9H963 129 aa13.25□□□□□ -0.29
LINC00404-201ENST00000418660 CALYQ9NYX4 217 aa13.25□□□□□ -0.29
LINC00404-201ENST00000418660 ZNF581Q9P0T4 197 aa13.25□□□□□ -0.29
LINC00404-201ENST00000418660 BUB1B-PAK6H3BSN5 160 aa13.24□□□□□ -0.29
LINC00404-201ENST00000418660 GEMIN2O14893 280 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms