RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 A0A1W2PRF3 423 aa10.22□□□□□ -0.77
SKA1-203ENST00000417656 A0A1W2PRM7 423 aa10.22□□□□□ -0.77
SKA1-203ENST00000417656 ODAMA1E959 279 aa10.22□□□□□ -0.77
SKA1-203ENST00000417656 PDCD5O14737 125 aa10.22□□□□□ -0.77
SKA1-203ENST00000417656 BPNT1O95861 308 aa10.22□□□□□ -0.77
SKA1-203ENST00000417656 IGHV1-69P01742 117 aa10.22□□□□□ -0.77
SKA1-203ENST00000417656 ZNF728P0DKX0 622 aa10.22□□□□□ -0.77
SKA1-203ENST00000417656 ERP29P30040 261 aaKnown RBP10.22□□□□□ -0.77
SKA1-203ENST00000417656 FGF9P31371 208 aaPredicted RBP10.22□□□□□ -0.77
SKA1-203ENST00000417656 ERVFRD-1P60508 538 aa10.22□□□□□ -0.77
SKA1-203ENST00000417656 HES5Q5TA89 166 aa10.22□□□□□ -0.77
SKA1-203ENST00000417656 BRICD5Q6PL45 260 aa10.22□□□□□ -0.77
SKA1-203ENST00000417656 ZNF782Q6ZMW2 699 aaPredicted RBP10.22□□□□□ -0.77
SKA1-203ENST00000417656 NR2C2APQ86WQ0 139 aa10.22□□□□□ -0.77
SKA1-203ENST00000417656 PNKDQ8N490 385 aa10.22□□□□□ -0.77
SKA1-203ENST00000417656 C11orf42Q8N5U0 333 aa10.22□□□□□ -0.77
SKA1-203ENST00000417656 NEK7Q8TDX7 302 aa10.22□□□□□ -0.77
SKA1-203ENST00000417656 TNFRSF14Q92956 283 aa10.22□□□□□ -0.77
SKA1-203ENST00000417656 MRPS24Q96EL2 167 aaKnown RBP10.22□□□□□ -0.77
SKA1-203ENST00000417656 ZNF714Q96N38 554 aa10.22□□□□□ -0.77
SKA1-203ENST00000417656 TMEM59Q9BXS4 323 aa10.22□□□□□ -0.77
SKA1-203ENST00000417656 RNF167Q9H6Y7 350 aa10.22□□□□□ -0.77
SKA1-203ENST00000417656 RCC2Q9P258 522 aaKnown RBP10.22□□□□□ -0.77
SKA1-203ENST00000417656 KIF25Q9UIL4 384 aa10.22□□□□□ -0.77
SKA1-203ENST00000417656 CUBNO60494 3623 aa10.21□□□□□ -0.77
SKA1-203ENST00000417656 TRGV10A0A0A0MS01 117 aa10.21□□□□□ -0.77
SKA1-203ENST00000417656 FUOMA2VDF0 154 aa10.21□□□□□ -0.77
SKA1-203ENST00000417656 C17orf98A8MV24 154 aa10.21□□□□□ -0.77
SKA1-203ENST00000417656 TMEM14DPA8MWL7 114 aa10.21□□□□□ -0.77
SKA1-203ENST00000417656 CLPXO76031 633 aa10.21□□□□□ -0.77
SKA1-203ENST00000417656 ARSBP15848 533 aa10.21□□□□□ -0.77
SKA1-203ENST00000417656 JUNBP17275 347 aaPredicted RBP10.21□□□□□ -0.77
SKA1-203ENST00000417656 RAB3BP20337 219 aa10.21□□□□□ -0.77
SKA1-203ENST00000417656 PRTN3P24158 256 aa10.21□□□□□ -0.77
SKA1-203ENST00000417656 COX7A1P24310 79 aa10.21□□□□□ -0.77
SKA1-203ENST00000417656 FPR2P25090 351 aa10.21□□□□□ -0.77
SKA1-203ENST00000417656 GLP1RP43220 463 aa10.21□□□□□ -0.77
SKA1-203ENST00000417656 RPS27AP62979 156 aaKnown RBP10.21□□□□□ -0.77
SKA1-203ENST00000417656 QRFPP83859 136 aa10.21□□□□□ -0.77
SKA1-203ENST00000417656 RSBN1Q5VWQ0 802 aaPredicted RBP10.21□□□□□ -0.77
SKA1-203ENST00000417656 NCR3LG1Q68D85 454 aa10.21□□□□□ -0.77
SKA1-203ENST00000417656 HCP5Q6MZN7 132 aa10.21□□□□□ -0.77
SKA1-203ENST00000417656 C1orf122Q6ZSJ8 110 aa10.21□□□□□ -0.77
SKA1-203ENST00000417656 C9orf139Q6ZV77 190 aa10.21□□□□□ -0.77
SKA1-203ENST00000417656 SIGLECL1Q8N7X8 197 aa10.21□□□□□ -0.77
SKA1-203ENST00000417656 OR51D1Q8NGF3 324 aa10.21□□□□□ -0.77
SKA1-203ENST00000417656 ZNF418Q8TF45 676 aaPredicted RBP10.21□□□□□ -0.77
SKA1-203ENST00000417656 YIPF6Q96EC8 236 aa10.21□□□□□ -0.77
SKA1-203ENST00000417656 ZNF48Q96MX3 618 aaPredicted RBP10.21□□□□□ -0.77
SKA1-203ENST00000417656 CENPOQ9BU64 300 aa10.21□□□□□ -0.77
SKA1-203ENST00000417656 UNKLQ9H9P5 680 aaKnown RBP10.21□□□□□ -0.77
SKA1-203ENST00000417656 MEIKINA0A087WXM9 373 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 A0A0B4J203 849 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 FAM90A10PA6NDY2 464 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 FAM90A18PA6NE21 464 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 FAM90A16PA6NEW6 464 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 FAM90A20PA6NIJ5 464 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 FAM90A8PA6NJQ4 464 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 FAM90A7PA6NKC0 464 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 IFITM5A6NNB3 132 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 FAM90A22PA8MWA6 464 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 FAM90A12PA8MX19 464 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 FAM90A5PA8MXJ8 464 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 FAM90A23PA8MXZ1 464 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 TCF21O43680 179 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 FAM90A15PP0C7V4 464 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 FAM90A13PP0C7W8 464 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 FAM90A14PP0C7W9 464 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 FAM90A24PP0C7X0 464 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 KCNJ3P48549 501 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 GUCA2AQ02747 115 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 TUSC1Q2TAM9 212 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 NKAPLQ5M9Q1 402 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 PRAMEF5Q5TYX0 476 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 SIGIRRQ6IA17 410 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 RAB12Q6IQ22 244 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 OR2W3Q7Z3T1 314 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 OR13A1Q8NGR1 328 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 KCNG3Q8TAE7 436 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 DYRK2Q92630 601 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 FAM3DQ96BQ1 224 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 KCTD7Q96MP8 289 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 NICN1Q9BSH3 213 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 SUCNR1Q9BXA5 334 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 SPACA1Q9HBV2 294 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 STEAP1Q9UHE8 339 aa10.2□□□□□ -0.78
SKA1-203ENST00000417656 UBE2J1Q9Y385 318 aaPredicted RBP10.2□□□□□ -0.78
SKA1-203ENST00000417656 A0A0A6YYD4 124 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 TRAV39A0A0B4J263 110 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 A0A0U1RQK1 487 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 TMEM272A0A1B0GTI8 110 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 hCG_1809904A0A1W2PP81 198 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 A0A1W2PPE2 198 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 A0A1W2PR64 198 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 A0A1W2PRV1 198 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 TMEM30CPA0ZSE6 113 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 AIPO00170 330 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 NPFFO15130 113 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 PDCD6O75340 191 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 MMP23AO75900 390 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms