RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 ZNF281Q9Y2X9 895 aa20.34■□□□□ 0.85
VEGFA-208ENST00000417285 NOTCH3Q9UM47 2321 aa20.33■□□□□ 0.85
VEGFA-208ENST00000417285 H0YJX3 145 aa20.33■□□□□ 0.85
VEGFA-208ENST00000417285 TOR1AO14656 332 aa20.33■□□□□ 0.85
VEGFA-208ENST00000417285 OGG1O15527 345 aa20.33■□□□□ 0.85
VEGFA-208ENST00000417285 IGLV1-47P01700 117 aa20.33■□□□□ 0.85
VEGFA-208ENST00000417285 CEACAM3P40198 252 aa20.33■□□□□ 0.85
VEGFA-208ENST00000417285 IL13RA2Q14627 380 aa20.33■□□□□ 0.85
VEGFA-208ENST00000417285 ATXN7L3Q14CW9 347 aaPredicted RBP20.33■□□□□ 0.85
VEGFA-208ENST00000417285 RSU1Q15404 277 aa20.33■□□□□ 0.85
VEGFA-208ENST00000417285 NDUFA11Q86Y39 141 aa20.33■□□□□ 0.85
VEGFA-208ENST00000417285 ZNF565Q8N9K5 539 aa20.33■□□□□ 0.85
VEGFA-208ENST00000417285 OR52N1Q8NH53 320 aa20.33■□□□□ 0.85
VEGFA-208ENST00000417285 WIPF2Q8TF74 440 aaPredicted RBP20.33■□□□□ 0.85
VEGFA-208ENST00000417285 COQ2Q96H96 371 aa20.33■□□□□ 0.85
VEGFA-208ENST00000417285 NCOR1P1Q9H4R4 102 aa20.33■□□□□ 0.85
VEGFA-208ENST00000417285 ING3Q9NXR8 418 aa20.33■□□□□ 0.85
VEGFA-208ENST00000417285 HSPE1-MOB4S4R3N1 261 aa20.33■□□□□ 0.85
VEGFA-208ENST00000417285 ZNF729A6NN14 1252 aaPredicted RBP20.32■□□□□ 0.84
VEGFA-208ENST00000417285 CD28P10747 220 aa20.32■□□□□ 0.84
VEGFA-208ENST00000417285 JUNBP17275 347 aaPredicted RBP20.32■□□□□ 0.84
VEGFA-208ENST00000417285 OR51T1Q8NGJ9 327 aa20.32■□□□□ 0.84
VEGFA-208ENST00000417285 CAPSLQ8WWF8 208 aa20.32■□□□□ 0.84
VEGFA-208ENST00000417285 LIN7BQ9HAP6 207 aa20.32■□□□□ 0.84
VEGFA-208ENST00000417285 TMEM138Q9NPI0 162 aa20.32■□□□□ 0.84
VEGFA-208ENST00000417285 CLEC2DQ9UHP7 191 aa20.32■□□□□ 0.84
VEGFA-208ENST00000417285 SIRT4Q9Y6E7 314 aaPredicted RBP20.32■□□□□ 0.84
VEGFA-208ENST00000417285 A0A087X0M5 115 aa20.31■□□□□ 0.84
VEGFA-208ENST00000417285 A0A1B0GX30 115 aa20.31■□□□□ 0.84
VEGFA-208ENST00000417285 VDAC2P45880 294 aaPredicted RBP20.31■□□□□ 0.84
VEGFA-208ENST00000417285 NSUN5P1Q3KNT7 163 aa20.31■□□□□ 0.84
VEGFA-208ENST00000417285 PAN3Q58A45 887 aaKnown RBP20.31■□□□□ 0.84
VEGFA-208ENST00000417285 OR4F17Q8NGA8 305 aa20.31■□□□□ 0.84
VEGFA-208ENST00000417285 OR4F4Q96R69 305 aa20.31■□□□□ 0.84
VEGFA-208ENST00000417285 BARHL1Q9BZE3 327 aa20.31■□□□□ 0.84
VEGFA-208ENST00000417285 OOSP1A8MZH6 123 aa20.3■□□□□ 0.84
VEGFA-208ENST00000417285 HSPB6O14558 160 aa20.3■□□□□ 0.84
VEGFA-208ENST00000417285 XPNPEP2O43895 674 aa20.3■□□□□ 0.84
VEGFA-208ENST00000417285 DDI2Q5TDH0 399 aa20.3■□□□□ 0.84
VEGFA-208ENST00000417285 C8orf59Q8N0T1 100 aaPredicted RBP20.3■□□□□ 0.84
VEGFA-208ENST00000417285 Q8NFD4 153 aa20.3■□□□□ 0.84
VEGFA-208ENST00000417285 GGHQ92820 318 aa20.3■□□□□ 0.84
VEGFA-208ENST00000417285 OCSTAMPQ9BR26 566 aa20.3■□□□□ 0.84
VEGFA-208ENST00000417285 PPIL3Q9H2H8 161 aaKnown RBP20.3■□□□□ 0.84
VEGFA-208ENST00000417285 KIAA2026Q5HYC2 2103 aa20.29■□□□□ 0.84
VEGFA-208ENST00000417285 KBTBD11-OT1A0A1B0GTJ5 212 aa20.29■□□□□ 0.84
VEGFA-208ENST00000417285 EFCAB10A6NFE3 127 aa20.29■□□□□ 0.84
VEGFA-208ENST00000417285 BUB1B-PAK6H3BSN5 160 aa20.29■□□□□ 0.84
VEGFA-208ENST00000417285 HTR3BO95264 441 aa20.29■□□□□ 0.84
VEGFA-208ENST00000417285 LALBAP00709 142 aa20.29■□□□□ 0.84
VEGFA-208ENST00000417285 BDKRB2P30411 391 aa20.29■□□□□ 0.84
VEGFA-208ENST00000417285 ZNF93P35789 620 aaPredicted RBP20.29■□□□□ 0.84
VEGFA-208ENST00000417285 CAPGP40121 348 aa20.29■□□□□ 0.84
VEGFA-208ENST00000417285 OR3A4PP47883 348 aa20.29■□□□□ 0.84
VEGFA-208ENST00000417285 ST3GAL4Q11206 333 aa20.29■□□□□ 0.84
VEGFA-208ENST00000417285 KPRPQ5T749 579 aaPredicted RBP20.29■□□□□ 0.84
VEGFA-208ENST00000417285 HIST2H2BDQ6DRA6 164 aa20.29■□□□□ 0.84
VEGFA-208ENST00000417285 CCDC144NLQ6NUI1 221 aa20.29■□□□□ 0.84
VEGFA-208ENST00000417285 BAIAP2L2Q6UXY1 529 aa20.29■□□□□ 0.84
VEGFA-208ENST00000417285 ASCL4Q6XD76 172 aa20.29■□□□□ 0.84
VEGFA-208ENST00000417285 Q6ZS46 218 aa20.29■□□□□ 0.84
VEGFA-208ENST00000417285 OR10K1Q8NGX5 313 aa20.29■□□□□ 0.84
VEGFA-208ENST00000417285 GHSRQ92847 366 aa20.29■□□□□ 0.84
VEGFA-208ENST00000417285 OR5M11Q96RB7 305 aa20.29■□□□□ 0.84
VEGFA-208ENST00000417285 S100A13Q99584 98 aa20.29■□□□□ 0.84
VEGFA-208ENST00000417285 METTL9Q9H1A3 318 aa20.29■□□□□ 0.84
VEGFA-208ENST00000417285 TRAV24A0A0B4J272 114 aa20.28■□□□□ 0.84
VEGFA-208ENST00000417285 FAM172BPA6NC97 362 aa20.28■□□□□ 0.84
VEGFA-208ENST00000417285 G3V4G9 280 aa20.28■□□□□ 0.84
VEGFA-208ENST00000417285 CGB3P0DN86 165 aa20.28■□□□□ 0.84
VEGFA-208ENST00000417285 CGB7P0DN87 165 aa20.28■□□□□ 0.84
VEGFA-208ENST00000417285 C21orf33P30042 268 aaPredicted RBP20.28■□□□□ 0.84
VEGFA-208ENST00000417285 GLP1RP43220 463 aa20.28■□□□□ 0.84
VEGFA-208ENST00000417285 KCNJ3P48549 501 aa20.28■□□□□ 0.84
VEGFA-208ENST00000417285 RIPK1Q13546 671 aa20.28■□□□□ 0.84
VEGFA-208ENST00000417285 HLA-DRB5Q30154 266 aa20.28■□□□□ 0.84
VEGFA-208ENST00000417285 BEAN1Q3B7T3 259 aa20.28■□□□□ 0.84
VEGFA-208ENST00000417285 PIGYQ3MUY2 71 aa20.28■□□□□ 0.84
VEGFA-208ENST00000417285 YIF1BQ5BJH7 314 aa20.28■□□□□ 0.84
VEGFA-208ENST00000417285 OGFRL1Q5TC84 451 aaPredicted RBP20.28■□□□□ 0.84
VEGFA-208ENST00000417285 SAMD5Q5TGI4 173 aa20.28■□□□□ 0.84
VEGFA-208ENST00000417285 DMKNQ6E0U4 476 aaPredicted RBP20.28■□□□□ 0.84
VEGFA-208ENST00000417285 LYG1Q8N1E2 194 aa20.28■□□□□ 0.84
VEGFA-208ENST00000417285 CITED2Q99967 270 aaPredicted RBP20.28■□□□□ 0.84
VEGFA-208ENST00000417285 ZNF286AQ9HBT8 521 aa20.28■□□□□ 0.84
VEGFA-208ENST00000417285 PAK1IP1Q9NWT1 392 aaPredicted RBP20.28■□□□□ 0.84
VEGFA-208ENST00000417285 IL36GQ9NZH8 169 aa20.28■□□□□ 0.84
VEGFA-208ENST00000417285 CNOT2Q9NZN8 540 aaKnown RBP20.28■□□□□ 0.84
VEGFA-208ENST00000417285 CKLFQ9UBR5 152 aa20.28■□□□□ 0.84
VEGFA-208ENST00000417285 ING4Q9UNL4 249 aa20.28■□□□□ 0.84
VEGFA-208ENST00000417285 PRKDCP78527 4128 aaKnown RBP20.27■□□□□ 0.84
VEGFA-208ENST00000417285 MEIKINA0A087WXM9 373 aa20.27■□□□□ 0.84
VEGFA-208ENST00000417285 TRBV5-5A0A0J9YX44 114 aa20.27■□□□□ 0.84
VEGFA-208ENST00000417285 LY6LH3BQJ8 138 aa20.27■□□□□ 0.84
VEGFA-208ENST00000417285 CSTBP04080 98 aaKnown RBP20.27■□□□□ 0.84
VEGFA-208ENST00000417285 GDNFP39905 211 aa20.27■□□□□ 0.84
VEGFA-208ENST00000417285 MNDAP41218 407 aa20.27■□□□□ 0.84
VEGFA-208ENST00000417285 TAS2R43P59537 309 aa20.27■□□□□ 0.84
VEGFA-208ENST00000417285 C17orf58Q2M2W7 97 aa20.27■□□□□ 0.84
VEGFA-208ENST00000417285 Q499Y3 187 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms