RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 CXorf66Q5JRM2 361 aaPredicted RBP12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 SDF2L1Q9HCN8 221 aa12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 VAX2Q9UIW0 290 aa12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 BDP1A6H8Y1 2624 aa12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 ARHGAP21Q5T5U3 1957 aa12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 A0A1B0GUS0 222 aa12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 IL33O95760 270 aa12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 PGCP20142 388 aa12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 GZMHP20718 246 aa12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 ECI1P42126 302 aa12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 MRPS11P82912 194 aaKnown RBP12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 FUT7Q11130 342 aa12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 FOXF1Q12946 379 aa12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 CARD17Q5XLA6 110 aa12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 ZNF787Q6DD87 383 aa12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 SLC25A26Q70HW3 274 aa12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 OR5B12Q96R08 314 aa12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 CDX2Q99626 313 aaPredicted RBP12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 TNFRSF10CO14798 259 aa12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 PITX3O75364 302 aa12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 SLC6A8P48029 635 aa12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 BIDP55957 195 aa12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 ARL6IP1Q15041 203 aa12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 NOXO1Q8NFA2 376 aa12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 TSLPQ969D9 159 aa12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 RPUSD4Q96CM3 377 aaKnown RBP12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 TBX15Q96SF7 602 aa12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 SMIM7Q9BQ49 75 aa12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 PLEKHF2Q9H8W4 249 aa12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 HS3ST3A1Q9Y663 406 aa12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 PROB1E7EW31 1015 aa12.77□□□□□ -0.36
NCKIPSD-204ENST00000416649 RER1O15258 196 aa12.77□□□□□ -0.36
NCKIPSD-204ENST00000416649 SIAH2O43255 324 aa12.77□□□□□ -0.36
NCKIPSD-204ENST00000416649 GALR1P47211 349 aa12.77□□□□□ -0.36
NCKIPSD-204ENST00000416649 GFERP55789 205 aa12.77□□□□□ -0.36
NCKIPSD-204ENST00000416649 PRSS12P56730 875 aa12.77□□□□□ -0.36
NCKIPSD-204ENST00000416649 ZFP36L1Q07352 338 aaKnown RBP12.77□□□□□ -0.36
NCKIPSD-204ENST00000416649 COTL1Q14019 142 aa12.77□□□□□ -0.36
NCKIPSD-204ENST00000416649 IL22RA2Q969J5 263 aa12.77□□□□□ -0.36
NCKIPSD-204ENST00000416649 TP53RKQ96S44 253 aa12.77□□□□□ -0.36
NCKIPSD-204ENST00000416649 FSCN3Q9NQT6 498 aa12.77□□□□□ -0.36
NCKIPSD-204ENST00000416649 MRPS18CQ9Y3D5 142 aaKnown RBP12.77□□□□□ -0.36
NCKIPSD-204ENST00000416649 A0A0J9YY10 115 aa12.77□□□□□ -0.37
NCKIPSD-204ENST00000416649 C5orf63A6NC05 138 aa12.77□□□□□ -0.37
NCKIPSD-204ENST00000416649 H7BYZ3 331 aa12.77□□□□□ -0.37
NCKIPSD-204ENST00000416649 ANGPTL7O43827 346 aa12.77□□□□□ -0.37
NCKIPSD-204ENST00000416649 HPRT1P00492 218 aa12.77□□□□□ -0.37
NCKIPSD-204ENST00000416649 TLE3Q04726 772 aa12.77□□□□□ -0.37
NCKIPSD-204ENST00000416649 C1orf194Q5T5A4 169 aa12.77□□□□□ -0.37
NCKIPSD-204ENST00000416649 MSI2Q96DH6 328 aaKnown RBP12.77□□□□□ -0.37
NCKIPSD-204ENST00000416649 GNPNAT1Q96EK6 184 aaPredicted RBP12.77□□□□□ -0.37
NCKIPSD-204ENST00000416649 C18orf12Q96KH6 178 aa12.77□□□□□ -0.37
NCKIPSD-204ENST00000416649 LPAR2Q9HBW0 351 aa12.77□□□□□ -0.37
NCKIPSD-204ENST00000416649 PLA2G3Q9NZ20 509 aa12.77□□□□□ -0.37
NCKIPSD-204ENST00000416649 SHISA8B8ZZ34 492 aa12.76□□□□□ -0.37
NCKIPSD-204ENST00000416649 H3BML4 177 aa12.76□□□□□ -0.37
NCKIPSD-204ENST00000416649 MSTNO14793 375 aa12.76□□□□□ -0.37
NCKIPSD-204ENST00000416649 BCL2P10415 239 aa12.76□□□□□ -0.37
NCKIPSD-204ENST00000416649 CEACAM1P13688 526 aa12.76□□□□□ -0.37
NCKIPSD-204ENST00000416649 ZNF17P17021 662 aa12.76□□□□□ -0.37
NCKIPSD-204ENST00000416649 CD38P28907 300 aa12.76□□□□□ -0.37
NCKIPSD-204ENST00000416649 OR1D4P47884 311 aa12.76□□□□□ -0.37
NCKIPSD-204ENST00000416649 SPIN3Q5JUX0 258 aa12.76□□□□□ -0.37
NCKIPSD-204ENST00000416649 ABLIM2Q6H8Q1 611 aa12.76□□□□□ -0.37
NCKIPSD-204ENST00000416649 FAM89BQ8N5H3 189 aa12.76□□□□□ -0.37
NCKIPSD-204ENST00000416649 OR8G5Q8NG78 346 aa12.76□□□□□ -0.37
NCKIPSD-204ENST00000416649 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.76□□□□□ -0.37
NCKIPSD-204ENST00000416649 ASB10Q8WXI3 467 aa12.76□□□□□ -0.37
NCKIPSD-204ENST00000416649 RSG1Q9BU20 258 aa12.76□□□□□ -0.37
NCKIPSD-204ENST00000416649 NECAP2Q9NVZ3 263 aa12.76□□□□□ -0.37
NCKIPSD-204ENST00000416649 SOHLH2Q9NX45 425 aa12.76□□□□□ -0.37
NCKIPSD-204ENST00000416649 P4HTMQ9NXG6 502 aa12.76□□□□□ -0.37
NCKIPSD-204ENST00000416649 NAGKQ9UJ70 344 aa12.76□□□□□ -0.37
NCKIPSD-204ENST00000416649 TCFL5Q9UL49 500 aa12.76□□□□□ -0.37
NCKIPSD-204ENST00000416649 TP53I11O14683 189 aa12.76□□□□□ -0.37
NCKIPSD-204ENST00000416649 FAHP16930 419 aa12.76□□□□□ -0.37
NCKIPSD-204ENST00000416649 CHST11Q9NPF2 352 aa12.76□□□□□ -0.37
NCKIPSD-204ENST00000416649 TMEM242Q9NWH2 141 aa12.76□□□□□ -0.37
NCKIPSD-204ENST00000416649 UBE2J1Q9Y385 318 aaPredicted RBP12.76□□□□□ -0.37
NCKIPSD-204ENST00000416649 TMEM210A6NLX4 147 aa12.75□□□□□ -0.37
NCKIPSD-204ENST00000416649 LINC00614P0C842 121 aa12.75□□□□□ -0.37
NCKIPSD-204ENST00000416649 PDCD1Q15116 288 aa12.75□□□□□ -0.37
NCKIPSD-204ENST00000416649 ETFRF1Q6IPR1 90 aa12.75□□□□□ -0.37
NCKIPSD-204ENST00000416649 TOMM20LQ6UXN7 152 aa12.75□□□□□ -0.37
NCKIPSD-204ENST00000416649 ZNF573Q86YE8 665 aa12.75□□□□□ -0.37
NCKIPSD-204ENST00000416649 NEK7Q8TDX7 302 aa12.75□□□□□ -0.37
NCKIPSD-204ENST00000416649 PARD6AQ9NPB6 346 aa12.75□□□□□ -0.37
NCKIPSD-204ENST00000416649 ASCL3Q9NQ33 180 aa12.75□□□□□ -0.37
NCKIPSD-204ENST00000416649 CLDN16Q9Y5I7 305 aa12.75□□□□□ -0.37
NCKIPSD-204ENST00000416649 MS4A18H0YCH9 400 aa12.75□□□□□ -0.37
NCKIPSD-204ENST00000416649 IFI6P09912 130 aa12.75□□□□□ -0.37
NCKIPSD-204ENST00000416649 TNFSF10P50591 281 aa12.75□□□□□ -0.37
NCKIPSD-204ENST00000416649 HSF1Q00613 529 aa12.75□□□□□ -0.37
NCKIPSD-204ENST00000416649 MS4A18Q3C1V0 323 aa12.75□□□□□ -0.37
NCKIPSD-204ENST00000416649 ZNF695Q8IW36 515 aa12.75□□□□□ -0.37
NCKIPSD-204ENST00000416649 OR4D5Q8NGN0 318 aa12.75□□□□□ -0.37
NCKIPSD-204ENST00000416649 POC1BQ8TC44 478 aa12.75□□□□□ -0.37
NCKIPSD-204ENST00000416649 MS4A10Q96PG2 267 aa12.75□□□□□ -0.37
NCKIPSD-204ENST00000416649 VSIRQ9H7M9 311 aa12.75□□□□□ -0.37
NCKIPSD-204ENST00000416649 PAM16Q9Y3D7 125 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms