RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 GLP1RP43220 463 aa12.08□□□□□ -0.48
UBXN4-203ENST00000416538 BEAN1Q3B7T3 259 aa12.08□□□□□ -0.48
UBXN4-203ENST00000416538 RSBN1Q5VWQ0 802 aaPredicted RBP12.08□□□□□ -0.48
UBXN4-203ENST00000416538 LAIR2Q6ISS4 152 aa12.08□□□□□ -0.48
UBXN4-203ENST00000416538 ZFP41Q8N8Y5 198 aa12.08□□□□□ -0.48
UBXN4-203ENST00000416538 ZNF485Q8NCK3 441 aa12.08□□□□□ -0.48
UBXN4-203ENST00000416538 Q8NFD4 153 aa12.08□□□□□ -0.48
UBXN4-203ENST00000416538 TNFAIP8L1Q8WVP5 186 aa12.08□□□□□ -0.48
UBXN4-203ENST00000416538 TMEM106AQ96A25 262 aa12.08□□□□□ -0.48
UBXN4-203ENST00000416538 RDH12Q96NR8 316 aa12.08□□□□□ -0.48
UBXN4-203ENST00000416538 NR1H4Q96RI1 486 aaPredicted RBP12.08□□□□□ -0.48
UBXN4-203ENST00000416538 CITED2Q99967 270 aaPredicted RBP12.08□□□□□ -0.48
UBXN4-203ENST00000416538 OCSTAMPQ9BR26 566 aa12.08□□□□□ -0.48
UBXN4-203ENST00000416538 DPM3Q9P2X0 92 aa12.08□□□□□ -0.48
UBXN4-203ENST00000416538 PITPNC1Q9UKF7 332 aa12.08□□□□□ -0.48
UBXN4-203ENST00000416538 DNAH3Q8TD57 4116 aa12.07□□□□□ -0.48
UBXN4-203ENST00000416538 TRAV39A0A0B4J263 110 aa12.07□□□□□ -0.48
UBXN4-203ENST00000416538 A0A1W2PP11 408 aa12.07□□□□□ -0.48
UBXN4-203ENST00000416538 ZNF729A6NN14 1252 aaPredicted RBP12.07□□□□□ -0.48
UBXN4-203ENST00000416538 DEGS1O15121 323 aa12.07□□□□□ -0.48
UBXN4-203ENST00000416538 IGHV3-7P01780 117 aa12.07□□□□□ -0.48
UBXN4-203ENST00000416538 AMY1AP04745 511 aa12.07□□□□□ -0.48
UBXN4-203ENST00000416538 AMY2AP04746 511 aa12.07□□□□□ -0.48
UBXN4-203ENST00000416538 RPS11P62280 158 aaKnown RBP eCLIP12.07□□□□□ -0.48
UBXN4-203ENST00000416538 NSUN5P1Q3KNT7 163 aa12.07□□□□□ -0.48
UBXN4-203ENST00000416538 KLHL22Q53GT1 634 aa12.07□□□□□ -0.48
UBXN4-203ENST00000416538 PAN3Q58A45 887 aaKnown RBP12.07□□□□□ -0.48
UBXN4-203ENST00000416538 SAMD5Q5TGI4 173 aa12.07□□□□□ -0.48
UBXN4-203ENST00000416538 RPL22L1Q6P5R6 122 aaKnown RBP12.07□□□□□ -0.48
UBXN4-203ENST00000416538 ASCL4Q6XD76 172 aa12.07□□□□□ -0.48
UBXN4-203ENST00000416538 SATL1Q86VE3 508 aa12.07□□□□□ -0.48
UBXN4-203ENST00000416538 LEAP2Q969E1 77 aa12.07□□□□□ -0.48
UBXN4-203ENST00000416538 PGLYRP3Q96LB9 341 aa12.07□□□□□ -0.48
UBXN4-203ENST00000416538 PRSS22Q9GZN4 317 aa12.07□□□□□ -0.48
UBXN4-203ENST00000416538 FAM192AQ9GZU8 254 aa12.07□□□□□ -0.48
UBXN4-203ENST00000416538 MMP28Q9H239 520 aa12.07□□□□□ -0.48
UBXN4-203ENST00000416538 DIMT1Q9UNQ2 313 aaKnown RBP12.07□□□□□ -0.48
UBXN4-203ENST00000416538 PCDHGB5Q9Y5G0 923 aa12.07□□□□□ -0.48
UBXN4-203ENST00000416538 TRBV5-5A0A0J9YX44 114 aa12.06□□□□□ -0.48
UBXN4-203ENST00000416538 OGG1O15527 345 aa12.06□□□□□ -0.48
UBXN4-203ENST00000416538 RPSAP08865 295 aaKnown RBP12.06□□□□□ -0.48
UBXN4-203ENST00000416538 DCKP27707 260 aa12.06□□□□□ -0.48
UBXN4-203ENST00000416538 SSTR5P35346 364 aa12.06□□□□□ -0.48
UBXN4-203ENST00000416538 ADARB1P78563 741 aaKnown RBP12.06□□□□□ -0.48
UBXN4-203ENST00000416538 DIAPH2-AS1Q14236 149 aa12.06□□□□□ -0.48
UBXN4-203ENST00000416538 IL13RA2Q14627 380 aa12.06□□□□□ -0.48
UBXN4-203ENST00000416538 TCTEX1D4Q5JR98 221 aa12.06□□□□□ -0.48
UBXN4-203ENST00000416538 TPTE2P1Q5T6R2 138 aa12.06□□□□□ -0.48
UBXN4-203ENST00000416538 OR52W1Q6IF63 320 aa12.06□□□□□ -0.48
UBXN4-203ENST00000416538 C10orf99Q6UWK7 81 aa12.06□□□□□ -0.48
UBXN4-203ENST00000416538 RTN4RL2Q86UN3 420 aa12.06□□□□□ -0.48
UBXN4-203ENST00000416538 ZNF555Q8NEP9 628 aa12.06□□□□□ -0.48
UBXN4-203ENST00000416538 GPR148Q8TDV2 347 aa12.06□□□□□ -0.48
UBXN4-203ENST00000416538 CYGBQ8WWM9 190 aa12.06□□□□□ -0.48
UBXN4-203ENST00000416538 SMIM19Q96E16 107 aa12.06□□□□□ -0.48
UBXN4-203ENST00000416538 GPER1Q99527 375 aa12.06□□□□□ -0.48
UBXN4-203ENST00000416538 CALYQ9NYX4 217 aa12.06□□□□□ -0.48
UBXN4-203ENST00000416538 TRAV8-7A0A075B6U6 113 aa12.05□□□□□ -0.48
UBXN4-203ENST00000416538 MEIKINA0A087WXM9 373 aa12.05□□□□□ -0.48
UBXN4-203ENST00000416538 KBTBD11-OT1A0A1B0GTJ5 212 aa12.05□□□□□ -0.48
UBXN4-203ENST00000416538 FUOMA2VDF0 154 aa12.05□□□□□ -0.48
UBXN4-203ENST00000416538 BUB1B-PAK6H3BSN5 160 aa12.05□□□□□ -0.48
UBXN4-203ENST00000416538 PRB2P02812 416 aaPredicted RBP12.05□□□□□ -0.48
UBXN4-203ENST00000416538 GNAO1P09471 354 aa12.05□□□□□ -0.48
UBXN4-203ENST00000416538 IGFBP3P17936 291 aaPredicted RBP12.05□□□□□ -0.48
UBXN4-203ENST00000416538 NFYBP25208 207 aa12.05□□□□□ -0.48
UBXN4-203ENST00000416538 VDAC2P45880 294 aaPredicted RBP12.05□□□□□ -0.48
UBXN4-203ENST00000416538 PAX5Q02548 391 aa12.05□□□□□ -0.48
UBXN4-203ENST00000416538 CCDC58Q4VC31 144 aa12.05□□□□□ -0.48
UBXN4-203ENST00000416538 DDI2Q5TDH0 399 aa12.05□□□□□ -0.48
UBXN4-203ENST00000416538 DMKNQ6E0U4 476 aaPredicted RBP12.05□□□□□ -0.48
UBXN4-203ENST00000416538 FAM53AQ6NSI3 398 aaPredicted RBP12.05□□□□□ -0.48
UBXN4-203ENST00000416538 ZNF596Q8TC21 504 aa12.05□□□□□ -0.48
UBXN4-203ENST00000416538 MRGPRDQ8TDS7 321 aa12.05□□□□□ -0.48
UBXN4-203ENST00000416538 MYCBPQ99417 103 aaPredicted RBP12.05□□□□□ -0.48
UBXN4-203ENST00000416538 SLC25A33Q9BSK2 321 aa12.05□□□□□ -0.48
UBXN4-203ENST00000416538 LINC00574Q9H8X3 128 aa12.05□□□□□ -0.48
UBXN4-203ENST00000416538 A0A1W2PPI3 338 aa12.04□□□□□ -0.48
UBXN4-203ENST00000416538 LEUTXA8MZ59 168 aa12.04□□□□□ -0.48
UBXN4-203ENST00000416538 NPIPB11E5RHQ5 1161 aa12.04□□□□□ -0.48
UBXN4-203ENST00000416538 HTR3BO95264 441 aa12.04□□□□□ -0.48
UBXN4-203ENST00000416538 IL1AP01583 271 aa12.04□□□□□ -0.48
UBXN4-203ENST00000416538 RBM11P57052 281 aaKnown RBP12.04□□□□□ -0.48
UBXN4-203ENST00000416538 RBM39Q14498 530 aaKnown RBP12.04□□□□□ -0.48
UBXN4-203ENST00000416538 RCN1Q15293 331 aa12.04□□□□□ -0.48
UBXN4-203ENST00000416538 RSU1Q15404 277 aa12.04□□□□□ -0.48
UBXN4-203ENST00000416538 KPRPQ5T749 579 aaPredicted RBP12.04□□□□□ -0.48
UBXN4-203ENST00000416538 SUMF2Q8NBJ7 301 aa12.04□□□□□ -0.48
UBXN4-203ENST00000416538 OR4D6Q8NGJ1 314 aa12.04□□□□□ -0.48
UBXN4-203ENST00000416538 HAVCR2Q8TDQ0 301 aa12.04□□□□□ -0.48
UBXN4-203ENST00000416538 GGHQ92820 318 aa12.04□□□□□ -0.48
UBXN4-203ENST00000416538 LIN7BQ9HAP6 207 aa12.04□□□□□ -0.48
UBXN4-203ENST00000416538 IL36GQ9NZH8 169 aa12.04□□□□□ -0.48
UBXN4-203ENST00000416538 OR6C3Q9NZP0 311 aa12.04□□□□□ -0.48
UBXN4-203ENST00000416538 ZNF281Q9Y2X9 895 aa12.04□□□□□ -0.48
UBXN4-203ENST00000416538 EXOSC1Q9Y3B2 195 aaKnown RBP12.04□□□□□ -0.48
UBXN4-203ENST00000416538 GEMIN2O14893 280 aaKnown RBP12.03□□□□□ -0.48
UBXN4-203ENST00000416538 XPNPEP2O43895 674 aa12.03□□□□□ -0.48
UBXN4-203ENST00000416538 OR2F2O95006 317 aa12.03□□□□□ -0.48
UBXN4-203ENST00000416538 ALDOBP05062 364 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms