RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 COL13A1Q5TAT6 717 aaPredicted RBP11.36□□□□□ -0.59
SCN1B-202ENST00000415950 APCDD1LQ8NCL9 501 aa11.36□□□□□ -0.59
SCN1B-202ENST00000415950 ZNF391Q9UJN7 358 aa11.36□□□□□ -0.59
SCN1B-202ENST00000415950 PHF3Q92576 2039 aaKnown RBP11.36□□□□□ -0.59
SCN1B-202ENST00000415950 ACACAQ13085 2346 aa11.36□□□□□ -0.59
SCN1B-202ENST00000415950 ALG1L2C9J202 215 aa11.36□□□□□ -0.59
SCN1B-202ENST00000415950 DHRS3O75911 302 aa11.36□□□□□ -0.59
SCN1B-202ENST00000415950 FGF2P09038 288 aa11.36□□□□□ -0.59
SCN1B-202ENST00000415950 GPR3P46089 330 aa11.36□□□□□ -0.59
SCN1B-202ENST00000415950 SKP2Q13309 424 aa11.36□□□□□ -0.59
SCN1B-202ENST00000415950 Q3ZCU0 254 aa11.36□□□□□ -0.59
SCN1B-202ENST00000415950 OR1L4Q8NGR5 311 aa11.36□□□□□ -0.59
SCN1B-202ENST00000415950 ZNF764Q96H86 408 aaPredicted RBP11.36□□□□□ -0.59
SCN1B-202ENST00000415950 SEC11CQ9BY50 192 aa11.36□□□□□ -0.59
SCN1B-202ENST00000415950 HES4Q9HCC6 221 aa11.36□□□□□ -0.59
SCN1B-202ENST00000415950 WBP1LQ9NX94 342 aa11.36□□□□□ -0.59
SCN1B-202ENST00000415950 LMO7DNF2Z398 122 aa11.35□□□□□ -0.59
SCN1B-202ENST00000415950 J3QR89 54 aa11.35□□□□□ -0.59
SCN1B-202ENST00000415950 IL2RAP01589 272 aa11.35□□□□□ -0.59
SCN1B-202ENST00000415950 RUNX1Q01196 453 aa11.35□□□□□ -0.59
SCN1B-202ENST00000415950 OR1L3Q8NH93 324 aa11.35□□□□□ -0.59
SCN1B-202ENST00000415950 MSGN1A6NI15 193 aa11.35□□□□□ -0.59
SCN1B-202ENST00000415950 MMP9P14780 707 aa11.35□□□□□ -0.59
SCN1B-202ENST00000415950 S100A7P31151 101 aa11.35□□□□□ -0.59
SCN1B-202ENST00000415950 GNG10P50151 68 aa11.35□□□□□ -0.59
SCN1B-202ENST00000415950 BSXQ3C1V8 233 aa11.35□□□□□ -0.59
SCN1B-202ENST00000415950 PABPC1L2AQ5JQF8 200 aa11.35□□□□□ -0.59
SCN1B-202ENST00000415950 JMJD6Q6NYC1 403 aaPredicted RBP11.35□□□□□ -0.59
SCN1B-202ENST00000415950 APOBEC3DQ96AK3 386 aaPredicted RBP11.35□□□□□ -0.59
SCN1B-202ENST00000415950 OR10C1Q96KK4 312 aa11.35□□□□□ -0.59
SCN1B-202ENST00000415950 ATP5SQ99766 215 aa11.35□□□□□ -0.59
SCN1B-202ENST00000415950 PILRAQ9UKJ1 303 aa11.35□□□□□ -0.59
SCN1B-202ENST00000415950 TOX3O15405 576 aaPredicted RBP11.35□□□□□ -0.59
SCN1B-202ENST00000415950 TMEM127O75204 238 aa11.35□□□□□ -0.59
SCN1B-202ENST00000415950 PDCD6O75340 191 aa11.35□□□□□ -0.59
SCN1B-202ENST00000415950 GNG3P63215 75 aa11.35□□□□□ -0.59
SCN1B-202ENST00000415950 FA2HQ7L5A8 372 aa11.35□□□□□ -0.59
SCN1B-202ENST00000415950 MYPOPQ86VE0 399 aaPredicted RBP11.35□□□□□ -0.59
SCN1B-202ENST00000415950 ZNF383Q8NA42 475 aa11.35□□□□□ -0.59
SCN1B-202ENST00000415950 MYO16Q9Y6X6 1858 aa11.35□□□□□ -0.59
SCN1B-202ENST00000415950 CHST1O43916 411 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 OR2A4O95047 310 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 CALCRP30988 508 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 DYNLT3P51808 116 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 SPNS3Q6ZMD2 512 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 LYG1Q8N1E2 194 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 OR10G4Q8NGN3 311 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 OR10G9Q8NGN4 311 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 OR10G7Q8NGN6 311 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 IP6K3Q96PC2 410 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 OR2A7Q96R45 310 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 OR1A1Q9P1Q5 309 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 PAPPA2Q9BXP8 1791 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 FER1L5A0AVI2 2057 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 FOXS1O43638 330 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 FZD5Q13467 585 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 LINC01590Q5TEZ4 76 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 MPTX1A8MV57 137 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 BPIFB3P59826 476 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 ZNF154Q13106 437 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 NTNG2Q96CW9 530 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 RHOVQ96L33 236 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 GPR27Q9NS67 375 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 NYNRINQ9P2P1 1898 aaKnown RBP11.34□□□□□ -0.59
SCN1B-202ENST00000415950 ACTL6AO96019 429 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 B2MP61769 119 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 BLNKQ8WV28 456 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 RAB40CQ96S21 281 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 HEXA-AS1Q9H8Q6 139 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.34□□□□□ -0.59
SCN1B-202ENST00000415950 GOLT1BQ9Y3E0 138 aa11.34□□□□□ -0.59
SCN1B-202ENST00000415950 SLC22A20A6NK97 555 aa11.33□□□□□ -0.6
SCN1B-202ENST00000415950 POU2F2P09086 479 aa11.33□□□□□ -0.6
SCN1B-202ENST00000415950 CCKARP32238 428 aa11.33□□□□□ -0.6
SCN1B-202ENST00000415950 RPS11P62280 158 aaKnown RBP eCLIP11.33□□□□□ -0.6
SCN1B-202ENST00000415950 NHLH1Q02575 133 aa11.33□□□□□ -0.6
SCN1B-202ENST00000415950 HFEQ30201 348 aa11.33□□□□□ -0.6
SCN1B-202ENST00000415950 SMIM21Q3B7S5 101 aa11.33□□□□□ -0.6
SCN1B-202ENST00000415950 DEGS2Q6QHC5 323 aa11.33□□□□□ -0.6
SCN1B-202ENST00000415950 OR2Z1Q8NG97 314 aa11.33□□□□□ -0.6
SCN1B-202ENST00000415950 OR2T10Q8NGZ9 312 aa11.33□□□□□ -0.6
SCN1B-202ENST00000415950 ZNF426Q9BUY5 554 aa11.33□□□□□ -0.6
SCN1B-202ENST00000415950 P4HTMQ9NXG6 502 aa11.33□□□□□ -0.6
SCN1B-202ENST00000415950 KLF13Q9Y2Y9 288 aaPredicted RBP11.33□□□□□ -0.6
SCN1B-202ENST00000415950 KLK2P20151 261 aa11.33□□□□□ -0.6
SCN1B-202ENST00000415950 OR3A1P47881 315 aa11.33□□□□□ -0.6
SCN1B-202ENST00000415950 LIAT1Q6ZQX7 453 aa11.33□□□□□ -0.6
SCN1B-202ENST00000415950 ZADH2Q8N4Q0 377 aa11.33□□□□□ -0.6
SCN1B-202ENST00000415950 PACRGQ96M98 296 aaPredicted RBP11.33□□□□□ -0.6
SCN1B-202ENST00000415950 TAAR6Q96RI8 345 aa11.33□□□□□ -0.6
SCN1B-202ENST00000415950 ABHD14AQ9BUJ0 271 aa11.33□□□□□ -0.6
SCN1B-202ENST00000415950 ANXA10Q9UJ72 324 aa11.33□□□□□ -0.6
SCN1B-202ENST00000415950 ZNF253O75346 499 aa11.33□□□□□ -0.6
SCN1B-202ENST00000415950 SELEP16581 610 aa11.33□□□□□ -0.6
SCN1B-202ENST00000415950 CDC34P49427 236 aaPredicted RBP11.33□□□□□ -0.6
SCN1B-202ENST00000415950 RANP62826 216 aaKnown RBP11.33□□□□□ -0.6
SCN1B-202ENST00000415950 OR10AD1Q8NGE0 317 aa11.33□□□□□ -0.6
SCN1B-202ENST00000415950 PTPMT1Q8WUK0 201 aaPredicted RBP11.33□□□□□ -0.6
SCN1B-202ENST00000415950 SOSTQ9BQB4 213 aa11.33□□□□□ -0.6
SCN1B-202ENST00000415950 SLC2A8Q9NY64 477 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms