RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 OR3A1P47881 315 aa12.4□□□□□ -0.42
SBDSP1-201ENST00000415772 SLC35B1P78383 322 aa12.4□□□□□ -0.42
SBDSP1-201ENST00000415772 ADARB1P78563 741 aaKnown RBP12.4□□□□□ -0.42
SBDSP1-201ENST00000415772 AESQ08117 197 aa12.4□□□□□ -0.42
SBDSP1-201ENST00000415772 HLA-DRB5Q30154 266 aa12.4□□□□□ -0.42
SBDSP1-201ENST00000415772 C10orf99Q6UWK7 81 aa12.4□□□□□ -0.42
SBDSP1-201ENST00000415772 CHPT1Q8WUD6 406 aa12.4□□□□□ -0.42
SBDSP1-201ENST00000415772 CYGBQ8WWM9 190 aa12.4□□□□□ -0.42
SBDSP1-201ENST00000415772 TOMM40LQ969M1 308 aa12.4□□□□□ -0.42
SBDSP1-201ENST00000415772 RNF166Q96A37 237 aaPredicted RBP12.4□□□□□ -0.42
SBDSP1-201ENST00000415772 PELI1Q96FA3 418 aa12.4□□□□□ -0.42
SBDSP1-201ENST00000415772 C4orf36Q96KX1 117 aa12.4□□□□□ -0.42
SBDSP1-201ENST00000415772 ZNF286AQ9HBT8 521 aa12.4□□□□□ -0.42
SBDSP1-201ENST00000415772 AMBNQ9NP70 447 aa12.4□□□□□ -0.42
SBDSP1-201ENST00000415772 FRRS1LQ9P0K9 344 aa12.4□□□□□ -0.42
SBDSP1-201ENST00000415772 AASSQ9UDR5 926 aa12.4□□□□□ -0.42
SBDSP1-201ENST00000415772 HHLA2Q9UM44 414 aa12.4□□□□□ -0.42
SBDSP1-201ENST00000415772 MYRFQ9Y2G1 1151 aa12.4□□□□□ -0.42
SBDSP1-201ENST00000415772 SERPINE3A8MV23 424 aa12.39□□□□□ -0.43
SBDSP1-201ENST00000415772 OR2H2O95918 312 aa12.39□□□□□ -0.43
SBDSP1-201ENST00000415772 CCDC159P0C7I6 412 aa12.39□□□□□ -0.43
SBDSP1-201ENST00000415772 KIR3DL2P43630 455 aa12.39□□□□□ -0.43
SBDSP1-201ENST00000415772 GLIPR1P48060 266 aa12.39□□□□□ -0.43
SBDSP1-201ENST00000415772 RAB25P57735 213 aa12.39□□□□□ -0.43
SBDSP1-201ENST00000415772 EGFEM1PQ0D2K5 195 aa12.39□□□□□ -0.43
SBDSP1-201ENST00000415772 MED21Q13503 144 aa12.39□□□□□ -0.43
SBDSP1-201ENST00000415772 ALKBH1Q13686 389 aaKnown RBP12.39□□□□□ -0.43
SBDSP1-201ENST00000415772 KRBOX4Q5JUW0 171 aa12.39□□□□□ -0.43
SBDSP1-201ENST00000415772 BAIAP2L2Q6UXY1 529 aa12.39□□□□□ -0.43
SBDSP1-201ENST00000415772 UTS2BQ765I0 119 aa12.39□□□□□ -0.43
SBDSP1-201ENST00000415772 ZNF329Q86UD4 541 aa12.39□□□□□ -0.43
SBDSP1-201ENST00000415772 LHFPL3Q86UP9 236 aa12.39□□□□□ -0.43
SBDSP1-201ENST00000415772 MRPL41Q8IXM3 137 aaKnown RBP12.39□□□□□ -0.43
SBDSP1-201ENST00000415772 OR52I1Q8NGK6 324 aa12.39□□□□□ -0.43
SBDSP1-201ENST00000415772 RFT1Q96AA3 541 aa12.39□□□□□ -0.43
SBDSP1-201ENST00000415772 HMG20AQ9NP66 347 aa12.39□□□□□ -0.43
SBDSP1-201ENST00000415772 TMEM212A6NML5 194 aa12.38□□□□□ -0.43
SBDSP1-201ENST00000415772 OR4C45A6NMZ5 311 aa12.38□□□□□ -0.43
SBDSP1-201ENST00000415772 ZNF729A6NN14 1252 aaPredicted RBP12.38□□□□□ -0.43
SBDSP1-201ENST00000415772 H0YJX3 145 aa12.38□□□□□ -0.43
SBDSP1-201ENST00000415772 IGLV1-47P01700 117 aa12.38□□□□□ -0.43
SBDSP1-201ENST00000415772 ATF1P18846 271 aa12.38□□□□□ -0.43
SBDSP1-201ENST00000415772 LMO1P25800 156 aa12.38□□□□□ -0.43
SBDSP1-201ENST00000415772 SLC6A1P30531 599 aa12.38□□□□□ -0.43
SBDSP1-201ENST00000415772 CAPGP40121 348 aa12.38□□□□□ -0.43
SBDSP1-201ENST00000415772 GBX2P52951 348 aaPredicted RBP12.38□□□□□ -0.43
SBDSP1-201ENST00000415772 CCDC58Q4VC31 144 aa12.38□□□□□ -0.43
SBDSP1-201ENST00000415772 TMPRSS11AQ6ZMR5 421 aa12.38□□□□□ -0.43
SBDSP1-201ENST00000415772 RNF144BQ7Z419 303 aa12.38□□□□□ -0.43
SBDSP1-201ENST00000415772 KLHL30-AS1Q8NEE0 82 aa12.38□□□□□ -0.43
SBDSP1-201ENST00000415772 OR9G1Q8NH87 305 aa12.38□□□□□ -0.43
SBDSP1-201ENST00000415772 CORO2AQ92828 525 aa12.38□□□□□ -0.43
SBDSP1-201ENST00000415772 SPSB1Q96BD6 273 aa12.38□□□□□ -0.43
SBDSP1-201ENST00000415772 FGGYQ96C11 551 aa12.38□□□□□ -0.43
SBDSP1-201ENST00000415772 OPALINQ96PE5 141 aa12.38□□□□□ -0.43
SBDSP1-201ENST00000415772 OR6C3Q9NZP0 311 aa12.38□□□□□ -0.43
SBDSP1-201ENST00000415772 ODAMA1E959 279 aa12.37□□□□□ -0.43
SBDSP1-201ENST00000415772 SNRNP70P08621 437 aaKnown RBP12.37□□□□□ -0.43
SBDSP1-201ENST00000415772 TMEM11P17152 192 aa12.37□□□□□ -0.43
SBDSP1-201ENST00000415772 MYL12AP19105 171 aa12.37□□□□□ -0.43
SBDSP1-201ENST00000415772 CD34P28906 385 aa12.37□□□□□ -0.43
SBDSP1-201ENST00000415772 GLP1RP43220 463 aa12.37□□□□□ -0.43
SBDSP1-201ENST00000415772 THBS3P49746 956 aa12.37□□□□□ -0.43
SBDSP1-201ENST00000415772 NANOS3P60323 173 aaKnown RBP12.37□□□□□ -0.43
SBDSP1-201ENST00000415772 RPL23AP62750 156 aaKnown RBP12.37□□□□□ -0.43
SBDSP1-201ENST00000415772 DGCR2P98153 550 aa12.37□□□□□ -0.43
SBDSP1-201ENST00000415772 PDZK1IP1Q13113 114 aa12.37□□□□□ -0.43
SBDSP1-201ENST00000415772 ATXN7L3Q14CW9 347 aaPredicted RBP12.37□□□□□ -0.43
SBDSP1-201ENST00000415772 C8orf86Q6ZUL3 223 aa12.37□□□□□ -0.43
SBDSP1-201ENST00000415772 FOXRED2Q8IWF2 684 aa12.37□□□□□ -0.43
SBDSP1-201ENST00000415772 C8orf59Q8N0T1 100 aaPredicted RBP12.37□□□□□ -0.43
SBDSP1-201ENST00000415772 ZNF565Q8N9K5 539 aa12.37□□□□□ -0.43
SBDSP1-201ENST00000415772 CHST4Q8NCG5 386 aa12.37□□□□□ -0.43
SBDSP1-201ENST00000415772 OR5D18Q8NGL1 313 aa12.37□□□□□ -0.43
SBDSP1-201ENST00000415772 COMMD4Q9H0A8 199 aa12.37□□□□□ -0.43
SBDSP1-201ENST00000415772 ZFP57Q9NU63 452 aa12.37□□□□□ -0.43
SBDSP1-201ENST00000415772 CHCHD3Q9NX63 227 aaKnown RBP12.37□□□□□ -0.43
SBDSP1-201ENST00000415772 DIMT1Q9UNQ2 313 aaKnown RBP12.37□□□□□ -0.43
SBDSP1-201ENST00000415772 EXOSC1Q9Y3B2 195 aaKnown RBP12.37□□□□□ -0.43
SBDSP1-201ENST00000415772 ANKRD65E5RJM6 399 aa12.36□□□□□ -0.43
SBDSP1-201ENST00000415772 DEGS1O15121 323 aa12.36□□□□□ -0.43
SBDSP1-201ENST00000415772 LIMS3P0CW19 117 aa12.36□□□□□ -0.43
SBDSP1-201ENST00000415772 LIMS4P0CW20 117 aa12.36□□□□□ -0.43
SBDSP1-201ENST00000415772 MYCNOSP40205 109 aa12.36□□□□□ -0.43
SBDSP1-201ENST00000415772 GP2P55259 537 aaKnown RBP12.36□□□□□ -0.43
SBDSP1-201ENST00000415772 OR2W3Q7Z3T1 314 aa12.36□□□□□ -0.43
SBDSP1-201ENST00000415772 SLC35E3Q7Z769 313 aa12.36□□□□□ -0.43
SBDSP1-201ENST00000415772 RDH10Q8IZV5 341 aa12.36□□□□□ -0.43
SBDSP1-201ENST00000415772 COMMD1Q8N668 190 aa12.36□□□□□ -0.43
SBDSP1-201ENST00000415772 OR13C3Q8NGS6 347 aa12.36□□□□□ -0.43
SBDSP1-201ENST00000415772 OR56B4Q8NH76 319 aa12.36□□□□□ -0.43
SBDSP1-201ENST00000415772 CNIH3Q8TBE1 160 aa12.36□□□□□ -0.43
SBDSP1-201ENST00000415772 TFAP2CQ92754 450 aa12.36□□□□□ -0.43
SBDSP1-201ENST00000415772 ADAT3Q96EY9 351 aaPredicted RBP12.36□□□□□ -0.43
SBDSP1-201ENST00000415772 ISG20L2Q9H9L3 353 aaKnown RBP12.36□□□□□ -0.43
SBDSP1-201ENST00000415772 RHOFQ9HBH0 211 aa12.36□□□□□ -0.43
SBDSP1-201ENST00000415772 CNOT2Q9NZN8 540 aaKnown RBP12.36□□□□□ -0.43
SBDSP1-201ENST00000415772 EFCAB10A6NFE3 127 aa12.35□□□□□ -0.43
SBDSP1-201ENST00000415772 MT-ND2P03891 347 aa12.35□□□□□ -0.43
SBDSP1-201ENST00000415772 AMY1AP04745 511 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms