RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 GUCA2BQ16661 112 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 C11orf88Q6PI97 169 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 GLIPR1L1Q6UWM5 242 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 OR2W3Q7Z3T1 314 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 BIVMQ86UB2 503 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 KCNRGQ8N5I3 272 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 ACBD4Q8NC06 268 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 OR2Z1Q8NG97 314 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 OR5A2Q8NGI9 324 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 FAM222BQ8WU58 562 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 FAM46BQ96A09 425 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 HIST1H2AAQ96QV6 131 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 TRAV14DV4A0A0A6YYC5 116 aa13.16□□□□□ -0.3
SHMT2-202ENST00000414700 IGKV1-12A0A0C4DH73 117 aa13.16□□□□□ -0.3
SHMT2-202ENST00000414700 TMEM272A0A1B0GTI8 110 aa13.16□□□□□ -0.3
SHMT2-202ENST00000414700 A0A1B0GWJ7 208 aa13.16□□□□□ -0.3
SHMT2-202ENST00000414700 J3QKU1 62 aa13.16□□□□□ -0.3
SHMT2-202ENST00000414700 BCL2L11O43521 198 aa13.16□□□□□ -0.3
SHMT2-202ENST00000414700 IGKV1D-12P01611 117 aa13.16□□□□□ -0.3
SHMT2-202ENST00000414700 RLN1P04808 185 aa13.16□□□□□ -0.3
SHMT2-202ENST00000414700 KCNJ3P48549 501 aa13.16□□□□□ -0.3
SHMT2-202ENST00000414700 ATP1B3P54709 279 aa13.16□□□□□ -0.3
SHMT2-202ENST00000414700 ZNF154Q13106 437 aa13.16□□□□□ -0.3
SHMT2-202ENST00000414700 UNC119Q13432 240 aa13.16□□□□□ -0.3
SHMT2-202ENST00000414700 NKPD1Q17RQ9 610 aa13.16□□□□□ -0.3
SHMT2-202ENST00000414700 ZNF672Q499Z4 452 aaPredicted RBP13.16□□□□□ -0.3
SHMT2-202ENST00000414700 ZNF611Q8N823 705 aa13.16□□□□□ -0.3
SHMT2-202ENST00000414700 TMEM104Q8NE00 496 aa13.16□□□□□ -0.3
SHMT2-202ENST00000414700 OR13G1Q8NGZ3 307 aa13.16□□□□□ -0.3
SHMT2-202ENST00000414700 GAL3ST1Q99999 423 aa13.16□□□□□ -0.3
SHMT2-202ENST00000414700 CMSS1Q9BQ75 279 aaKnown RBP13.16□□□□□ -0.3
SHMT2-202ENST00000414700 GSN-AS1Q9NRJ2 163 aa13.16□□□□□ -0.3
SHMT2-202ENST00000414700 ZFP57Q9NU63 452 aa13.16□□□□□ -0.3
SHMT2-202ENST00000414700 CARHSP1Q9Y2V2 147 aaKnown RBP13.16□□□□□ -0.3
SHMT2-202ENST00000414700 FASNP49327 2511 aaKnown RBP13.16□□□□□ -0.3
SHMT2-202ENST00000414700 CLEC18AA5D8T8 446 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 SPRY3O43610 288 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 SSX5O60225 188 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 CALCBP10092 127 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 TAS2R20P59543 309 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 SELENOVP59797 346 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 UBE2MP61081 183 aaKnown RBP13.15□□□□□ -0.3
SHMT2-202ENST00000414700 GNG3P63215 75 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 ZNF345Q14585 488 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 C10orf91Q5T1B1 145 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 CLEC18BQ6UXF7 455 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 DNM1P46Q6ZS02 220 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 ZNF546Q86UE3 836 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 PNLDC1Q8NA58 520 aaKnown RBP13.15□□□□□ -0.3
SHMT2-202ENST00000414700 CLEC18CQ8NCF0 446 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 ASH1LQ9NR48 2969 aaKnown RBP13.15□□□□□ -0.3
SHMT2-202ENST00000414700 OR5B21A6NL26 309 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 SYNGR1O43759 233 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 OR2F2O95006 317 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 S100A9P06702 114 aaKnown RBP13.15□□□□□ -0.3
SHMT2-202ENST00000414700 TMEM225BP0DP42 221 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 VSIG8P0DPA2 414 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 ADCYAP1P18509 176 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 CDK2P24941 298 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 APOBEC3AP31941 199 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-202ENST00000414700 LUMP51884 338 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-202ENST00000414700 QRFPP83859 136 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 HOXA4Q00056 320 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-202ENST00000414700 PDZK1IP1Q13113 114 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 OR2F1Q13607 317 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 MST1LQ2TV78 715 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 SLC22A6Q4U2R8 563 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 FAM76BQ5HYJ3 339 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 SLC25A26Q70HW3 274 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 RTL8AQ9BWD3 113 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 FBN2P35556 2912 aa13.15□□□□□ -0.3
SHMT2-202ENST00000414700 SPG11Q96JI7 2443 aa13.14□□□□□ -0.31
SHMT2-202ENST00000414700 TMEM82A0PJX8 343 aa13.14□□□□□ -0.31
SHMT2-202ENST00000414700 LDLRAD4O15165 306 aa13.14□□□□□ -0.31
SHMT2-202ENST00000414700 RHBDL1O75783 438 aa13.14□□□□□ -0.31
SHMT2-202ENST00000414700 CRYBA1P05813 215 aa13.14□□□□□ -0.31
SHMT2-202ENST00000414700 S100A6P06703 90 aa13.14□□□□□ -0.31
SHMT2-202ENST00000414700 HEXAP06865 529 aa13.14□□□□□ -0.31
SHMT2-202ENST00000414700 GRPP07492 148 aa13.14□□□□□ -0.31
SHMT2-202ENST00000414700 PRAMEF6Q5VXH4 476 aa13.14□□□□□ -0.31
SHMT2-202ENST00000414700 OR4C16Q8NGL9 310 aa13.14□□□□□ -0.31
SHMT2-202ENST00000414700 THAP6Q8TBB0 222 aa13.14□□□□□ -0.31
SHMT2-202ENST00000414700 MICU1Q9BPX6 476 aa13.14□□□□□ -0.31
SHMT2-202ENST00000414700 OR51I2Q9H344 312 aa13.14□□□□□ -0.31
SHMT2-202ENST00000414700 ELL3Q9HB65 397 aaPredicted RBP13.14□□□□□ -0.31
SHMT2-202ENST00000414700 PCDHB10Q9UN67 800 aa13.14□□□□□ -0.31
SHMT2-202ENST00000414700 ETV7Q9Y603 341 aa13.14□□□□□ -0.31
SHMT2-202ENST00000414700 F8VVB4 439 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 F8VWA3 439 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 GATCO43716 136 aaKnown RBP13.13□□□□□ -0.31
SHMT2-202ENST00000414700 SFTPBP07988 381 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 CSF1P09603 554 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 PTHLHP12272 177 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 SERPINA2P20848 420 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 NPBWR2P48146 333 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 PAN3Q58A45 887 aaKnown RBP13.13□□□□□ -0.31
SHMT2-202ENST00000414700 SCCPDHQ8NBX0 429 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 OR1S2Q8NGQ3 325 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 OR51F2Q8NH61 342 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 C2CD4CQ8TF44 421 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms