RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 WDR25Q64LD2 544 aaPredicted RBP4.02□□□□□ -1.77
VPS41-205ENST00000414632 TMEM42Q69YG0 159 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 STUMQ69YW2 141 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 IZUMO2Q6UXV1 221 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 ZNF841Q6ZN19 808 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 EGFL6Q8IUX8 553 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 PDZD9Q8IXQ8 264 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 OR5A2Q8NGI9 324 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 OR5D18Q8NGL1 313 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 OR13C9Q8NGT0 318 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 AQP3Q92482 292 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 H1FXQ92522 213 aaKnown RBP4.02□□□□□ -1.77
VPS41-205ENST00000414632 RGP1Q92546 391 aaPredicted RBP4.02□□□□□ -1.77
VPS41-205ENST00000414632 SLAMF9Q96A28 289 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 TMEM80Q96HE8 168 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 GAFA1Q96PS6 74 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 SLC6A7Q99884 636 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 KRTAP9-8Q9BYQ0 159 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 CHST5Q9GZS9 411 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 TLNRD1Q9H1K6 362 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 VCXQ9H320 206 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 C8orf4Q9NR00 106 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 IL36RNQ9UBH0 155 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 OR14J1Q9UGF5 321 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 OPN4Q9UHM6 478 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 DIMT1Q9UNQ2 313 aaKnown RBP4.02□□□□□ -1.77
VPS41-205ENST00000414632 SLC7A11Q9UPY5 501 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 INSIG2Q9Y5U4 225 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 TENM1Q9UKZ4 2725 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 IGKV1D-17A0A075B6S4 117 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 TRAV40A0A0B4J280 105 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 IGHV2-70DA0A0C4DH43 119 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 A0A1W2PPK0 400 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 NKX6-3A6NJ46 265 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 OR2AT4A6NND4 320 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 J3QT63 122 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 SLC1A7O00341 560 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 TNFRSF13BO14836 293 aaPredicted RBP4.01□□□□□ -1.77
VPS41-205ENST00000414632 MYL12BO14950 172 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 NDUFB3O43676 98 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 ANGPTL7O43827 346 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 GATBO75879 557 aaKnown RBP4.01□□□□□ -1.77
VPS41-205ENST00000414632 NXPH2O95156 264 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 ISG15P05161 165 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 SFTPBP07988 381 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 HCKP08631 526 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 OCM2P0CE71 109 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 OCMP0CE72 109 aaPredicted RBP4.01□□□□□ -1.77
VPS41-205ENST00000414632 PGA5P0DJD9 388 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 IGHV4-38-2P0DP08 117 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 PSG2P11465 335 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 ZNF12P17014 697 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 ATF1P18846 271 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 BCL3P20749 454 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 PCMT1P22061 227 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 DCKP27707 260 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 C21orf33P30042 268 aaPredicted RBP4.01□□□□□ -1.77
VPS41-205ENST00000414632 NPBWR2P48146 333 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 CAPZA1P52907 286 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 FGF12P61328 243 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 ARF6P62330 175 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 PAX2Q02962 417 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 CDK5R1Q15078 307 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 KCNJ8Q15842 424 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 ARMCX4Q5H9R4 360 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 FAM76BQ5HYJ3 339 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 KLF17Q5JT82 389 aaPredicted RBP4.01□□□□□ -1.77
VPS41-205ENST00000414632 KRBOX4Q5JUW0 171 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 PIK3CD-AS1Q5SR53 167 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 RUSC1-AS1Q66K80 236 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 BTNL3Q6UXE8 466 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 ACP7Q6ZNF0 438 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 PQLC2Q6ZP29 291 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 Q6ZSR3 168 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 SLC25A26Q70HW3 274 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 BTN2A1Q7KYR7 527 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 C1QL2Q7Z5L3 287 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 SATL1Q86VE3 508 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 ZNF573Q86YE8 665 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 SYS1Q8N2H4 156 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 STX19Q8N4C7 294 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 CD177Q8N6Q3 437 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 POC1AQ8NBT0 407 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 ZNRF1Q8ND25 227 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 TMEM185AQ8NFB2 350 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 OR51A2Q8NGJ7 313 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 OR10Z1Q8NGY1 313 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 OR5AK2Q8NH90 309 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 TMEM18Q96B42 140 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 TMIGD2Q96BF3 282 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 BORCS8Q96FH0 119 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 MRPL48Q96GC5 212 aaKnown RBP4.01□□□□□ -1.77
VPS41-205ENST00000414632 CNBD2Q96M20 576 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 PCGF1Q9BSM1 259 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 NPFFR1Q9GZQ6 430 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 COMMD4Q9H0A8 199 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 NEK6Q9HC98 313 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 ABCB9Q9NP78 766 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 INPP5EQ9NRR6 644 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 RBFOX1Q9NWB1 397 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms