RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 FAM90A16PA6NEW6 464 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 FAM90A20PA6NIJ5 464 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 FAM90A8PA6NJQ4 464 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 FAM90A7PA6NKC0 464 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 ZNF729A6NN14 1252 aaPredicted RBP12.02□□□□□ -0.49
CHD1-202ENST00000414220 FAM90A22PA8MWA6 464 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 FAM90A12PA8MX19 464 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 FAM90A5PA8MXJ8 464 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 FAM90A23PA8MXZ1 464 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 MCRIP1C9JLW8 97 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 HSPB6O14558 160 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 GEMIN2O14893 280 aaKnown RBP12.02□□□□□ -0.49
CHD1-202ENST00000414220 RRP9O43818 475 aaKnown RBP12.02□□□□□ -0.49
CHD1-202ENST00000414220 CRTAPO75718 401 aaPredicted RBP12.02□□□□□ -0.49
CHD1-202ENST00000414220 SC5DO75845 299 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 CLPXO76031 633 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 MELTFP08582 738 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 FAM90A15PP0C7V4 464 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 FAM90A13PP0C7W8 464 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 FAM90A14PP0C7W9 464 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 FAM90A24PP0C7X0 464 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 IGHV1-8P0DP01 117 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 SAA4P35542 130 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 GLIPR1P48060 266 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 RPS25P62851 125 aaKnown RBP12.02□□□□□ -0.49
CHD1-202ENST00000414220 DYNC1I2Q13409 638 aaKnown RBP12.02□□□□□ -0.49
CHD1-202ENST00000414220 ATXN7L3Q14CW9 347 aaPredicted RBP12.02□□□□□ -0.49
CHD1-202ENST00000414220 C12orf54Q6X4T0 127 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 PNKDQ8N490 385 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 PIP4P2Q8N4L2 257 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 SUMF2Q8NBJ7 301 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 DUX5Q96PT3 197 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 NKX3-1Q99801 234 aaPredicted RBP12.02□□□□□ -0.49
CHD1-202ENST00000414220 DPCDQ9BVM2 203 aaPredicted RBP12.02□□□□□ -0.49
CHD1-202ENST00000414220 RAB9BQ9NP90 201 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 SOX21Q9Y651 276 aaPredicted RBP12.02□□□□□ -0.49
CHD1-202ENST00000414220 TRAV24A0A0B4J272 114 aa12.01□□□□□ -0.49
CHD1-202ENST00000414220 CCRL2O00421 344 aa12.01□□□□□ -0.49
CHD1-202ENST00000414220 PDCD5O14737 125 aa12.01□□□□□ -0.49
CHD1-202ENST00000414220 ARG1P05089 322 aa12.01□□□□□ -0.49
CHD1-202ENST00000414220 MGMTP16455 207 aa12.01□□□□□ -0.49
CHD1-202ENST00000414220 PSMB9P28065 219 aa12.01□□□□□ -0.49
CHD1-202ENST00000414220 HTR2CP28335 458 aa12.01□□□□□ -0.49
CHD1-202ENST00000414220 DLX6P56179 175 aa12.01□□□□□ -0.49
CHD1-202ENST00000414220 FOXL1Q12952 345 aa12.01□□□□□ -0.49
CHD1-202ENST00000414220 INSL4Q14641 139 aa12.01□□□□□ -0.49
CHD1-202ENST00000414220 TAF9Q16594 264 aa12.01□□□□□ -0.49
CHD1-202ENST00000414220 RTN4RL2Q86UN3 420 aa12.01□□□□□ -0.49
CHD1-202ENST00000414220 LDLRAD3Q86YD5 345 aa12.01□□□□□ -0.49
CHD1-202ENST00000414220 SPARTQ8N0X7 666 aa12.01□□□□□ -0.49
CHD1-202ENST00000414220 C11orf42Q8N5U0 333 aa12.01□□□□□ -0.49
CHD1-202ENST00000414220 OR6M1Q8NGM8 313 aa12.01□□□□□ -0.49
CHD1-202ENST00000414220 OR5R1Q8NH85 324 aa12.01□□□□□ -0.49
CHD1-202ENST00000414220 SELENOIQ9C0D9 397 aa12.01□□□□□ -0.49
CHD1-202ENST00000414220 PLGRKTQ9HBL7 147 aa12.01□□□□□ -0.49
CHD1-202ENST00000414220 TNFRSF19Q9NS68 423 aa12.01□□□□□ -0.49
CHD1-202ENST00000414220 TBL2Q9Y4P3 447 aaKnown RBP12.01□□□□□ -0.49
CHD1-202ENST00000414220 MXRA5Q9NR99 2828 aa12.01□□□□□ -0.49
CHD1-202ENST00000414220 ATRQ13535 2644 aa12.01□□□□□ -0.49
CHD1-202ENST00000414220 SVEP1Q4LDE5 3571 aa12□□□□□ -0.49
CHD1-202ENST00000414220 TMEM30CPA0ZSE6 113 aa12□□□□□ -0.49
CHD1-202ENST00000414220 MEX3AA1L020 520 aaKnown RBP12□□□□□ -0.49
CHD1-202ENST00000414220 TMEM89A2RUT3 159 aa12□□□□□ -0.49
CHD1-202ENST00000414220 BPNT1O95861 308 aa12□□□□□ -0.49
CHD1-202ENST00000414220 GZMHP20718 246 aa12□□□□□ -0.49
CHD1-202ENST00000414220 GALP22466 123 aa12□□□□□ -0.49
CHD1-202ENST00000414220 MYL9P24844 172 aa12□□□□□ -0.49
CHD1-202ENST00000414220 CALRP27797 417 aaKnown RBP12□□□□□ -0.49
CHD1-202ENST00000414220 IER3P46695 156 aa12□□□□□ -0.49
CHD1-202ENST00000414220 DLX1P56177 255 aa12□□□□□ -0.49
CHD1-202ENST00000414220 RPL15P61313 204 aaKnown RBP12□□□□□ -0.49
CHD1-202ENST00000414220 PAX5Q02548 391 aa12□□□□□ -0.49
CHD1-202ENST00000414220 PRB3Q04118 309 aaPredicted RBP12□□□□□ -0.49
CHD1-202ENST00000414220 C1orf100Q5SVJ3 147 aa12□□□□□ -0.49
CHD1-202ENST00000414220 FAM27D1Q5T7N8 215 aa12□□□□□ -0.49
CHD1-202ENST00000414220 UBE2UQ5VVX9 321 aa12□□□□□ -0.49
CHD1-202ENST00000414220 SLC35E4Q6ICL7 350 aa12□□□□□ -0.49
CHD1-202ENST00000414220 ZNF773Q6PK81 442 aa12□□□□□ -0.49
CHD1-202ENST00000414220 HEPN1Q6WQI6 88 aa12□□□□□ -0.49
CHD1-202ENST00000414220 TMEM91Q6ZNR0 172 aa12□□□□□ -0.49
CHD1-202ENST00000414220 GDPGP1Q6ZNW5 385 aa12□□□□□ -0.49
CHD1-202ENST00000414220 LRRTM1Q86UE6 522 aa12□□□□□ -0.49
CHD1-202ENST00000414220 BEND2Q8NDZ0 799 aa12□□□□□ -0.49
CHD1-202ENST00000414220 OR11H6Q8NGC7 330 aa12□□□□□ -0.49
CHD1-202ENST00000414220 KCNG3Q8TAE7 436 aa12□□□□□ -0.49
CHD1-202ENST00000414220 ZNF596Q8TC21 504 aa12□□□□□ -0.49
CHD1-202ENST00000414220 CLEC7AQ9BXN2 247 aa12□□□□□ -0.49
CHD1-202ENST00000414220 TMEM133Q9H2Q1 129 aa12□□□□□ -0.49
CHD1-202ENST00000414220 VCX3AQ9NNX9 186 aa12□□□□□ -0.49
CHD1-202ENST00000414220 NDUFB11Q9NX14 153 aa12□□□□□ -0.49
CHD1-202ENST00000414220 ZNRD1Q9P1U0 126 aa12□□□□□ -0.49
CHD1-202ENST00000414220 TOR1AO14656 332 aa11.99□□□□□ -0.49
CHD1-202ENST00000414220 CA11O75493 328 aa11.99□□□□□ -0.49
CHD1-202ENST00000414220 GLAP06280 429 aa11.99□□□□□ -0.49
CHD1-202ENST00000414220 HKR1P10072 659 aa11.99□□□□□ -0.49
CHD1-202ENST00000414220 CDK2P24941 298 aa11.99□□□□□ -0.49
CHD1-202ENST00000414220 GLP1RP43220 463 aa11.99□□□□□ -0.49
CHD1-202ENST00000414220 ARHGDIBP52566 201 aa11.99□□□□□ -0.49
CHD1-202ENST00000414220 PRRX1P54821 245 aa11.99□□□□□ -0.49
CHD1-202ENST00000414220 FABP5Q01469 135 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms