RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 PI4KAP42356 2102 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 TECTAO75443 2155 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 F5P12259 2224 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 SZT2Q5T011 3432 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 NOTCH2Q04721 2471 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 IGHV1OR15-9A0A0B4J2B8 117 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 TMEM223A0PJW6 202 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 hCG_2039718K7EN88 272 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 M0R129 80 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 TXNDC9O14530 226 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 RFXANKO14593 260 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 FFAR1O14842 300 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 CASC3O15234 703 aaKnown RBP2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 SLC31A1O15431 190 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 CLOCKO15516 846 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 WBP4O75554 376 aaKnown RBP2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 CLPXO76031 633 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 H6PDO95479 791 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 GIMD1P0DJR0 217 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 UGT2B7P16662 529 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 RAB3BP20337 219 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 RPS4Y1P22090 263 aaKnown RBP2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 CRHBPP24387 322 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 KDELR2P33947 212 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 TGFBR2P37173 567 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 DAPP51397 102 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 ATP5IP56385 69 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 ACTG2P63267 376 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 MXD1Q05195 221 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 PRDX1Q06830 199 aaKnown RBP2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 MERTKQ12866 999 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 SRSF5Q13243 272 aaKnown RBP2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 MED21Q13503 144 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 SF3A2Q15428 464 aaKnown RBP2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 IMPG1Q17R60 797 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 KDM4DQ6B0I6 523 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 RNASEKQ6P5S7 137 aaKnown RBP2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 ERICH5Q6P6B1 374 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 DHRS4L2Q6PKH6 230 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 CEMP1Q6PRD7 247 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 SPESP1Q6UW49 350 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 EIF3MQ7L2H7 374 aaKnown RBP2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 ARRDC1Q8N5I2 433 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 OR5AK3PQ8NH89 298 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 CDC26Q8NHZ8 85 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 KCNG3Q8TAE7 436 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 NT5CQ8TCD5 201 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 SLC37A2Q8TED4 501 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 SKA2Q8WVK7 121 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 RGP1Q92546 391 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 TMIGD2Q96BF3 282 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 PPCDCQ96CD2 204 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 NEURL3Q96EH8 262 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 GALNT14Q96FL9 552 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 LINC00477Q96M19 166 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 RNF145Q96MT1 663 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 RDH12Q96NR8 316 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 PANX1Q96RD7 426 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 MYCBPQ99417 103 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 DOK1Q99704 481 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 ATP5SQ99766 215 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 CTRCQ99895 268 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 RTBDNQ9BSG5 229 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 C9orf16Q9BUW7 83 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 MRPS26Q9BYN8 205 aaKnown RBP2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 YIPF3Q9GZM5 350 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 VCX3BQ9H321 246 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 TMEM38AQ9H6F2 299 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 C8orf4Q9NR00 106 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 DYRK4Q9NR20 520 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 FKBP14Q9NWM8 211 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 TAS2R7Q9NYW3 318 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 PISDQ9UG56 409 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 GOLT1BQ9Y3E0 138 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 ASB4Q9Y574 426 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 KCNE3Q9Y6H6 103 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 RP1P56715 2156 aa2.07□□□□□ -2.08
HMGB1P11-201ENST00000413899 EYSQ5T1H1 3165 aa2.06□□□□□ -2.08
HMGB1P11-201ENST00000413899 SPTBP11277 2137 aa2.06□□□□□ -2.08
HMGB1P11-201ENST00000413899 CACNA1EQ15878 2313 aa2.06□□□□□ -2.08
HMGB1P11-201ENST00000413899 IGLV2-18A0A075B6J9 118 aa2.06□□□□□ -2.08
HMGB1P11-201ENST00000413899 TRAV40A0A0B4J280 105 aa2.06□□□□□ -2.08
HMGB1P11-201ENST00000413899 ZNF816-ZNF321PA0A0X1KG74 233 aa2.06□□□□□ -2.08
HMGB1P11-201ENST00000413899 SMIM31A0A1B0GVY4 71 aa2.06□□□□□ -2.08
HMGB1P11-201ENST00000413899 ARRDC5A6NEK1 342 aa2.06□□□□□ -2.08
HMGB1P11-201ENST00000413899 HMGN4O00479 90 aa2.06□□□□□ -2.08
HMGB1P11-201ENST00000413899 PPP1R2P9O14990 202 aa2.06□□□□□ -2.08
HMGB1P11-201ENST00000413899 RBFOX2O43251 390 aaKnown RBP eCLIP2.06□□□□□ -2.08
HMGB1P11-201ENST00000413899 FOXH1O75593 365 aa2.06□□□□□ -2.08
HMGB1P11-201ENST00000413899 RBBP9O75884 186 aa2.06□□□□□ -2.08
HMGB1P11-201ENST00000413899 TNFAIP8O95379 198 aa2.06□□□□□ -2.08
HMGB1P11-201ENST00000413899 CPSF4O95639 269 aaKnown RBP2.06□□□□□ -2.08
HMGB1P11-201ENST00000413899 ZNF682O95780 498 aa2.06□□□□□ -2.08
HMGB1P11-201ENST00000413899 CLPSP04118 112 aa2.06□□□□□ -2.08
HMGB1P11-201ENST00000413899 KLK1P06870 262 aa2.06□□□□□ -2.08
HMGB1P11-201ENST00000413899 TFPTP0C1Z6 253 aa2.06□□□□□ -2.08
HMGB1P11-201ENST00000413899 IL9P15248 144 aa2.06□□□□□ -2.08
HMGB1P11-201ENST00000413899 BCKDHBP21953 392 aa2.06□□□□□ -2.08
HMGB1P11-201ENST00000413899 HIST1H1TP22492 207 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P11-201ENST00000413899 NPY1RP25929 384 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms