RNA–Protein interactions for RNA: ENST00000413137.6

RHBDD3-203, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-203ENST00000413137 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP21.54■■□□□ 1.04
RHBDD3-203ENST00000413137 SETXQ7Z333 2677 aaKnown RBP21.54■■□□□ 1.04
RHBDD3-203ENST00000413137 SSX5O60225 188 aa21.53■■□□□ 1.04
RHBDD3-203ENST00000413137 MELTFP08582 738 aa21.53■■□□□ 1.04
RHBDD3-203ENST00000413137 RNASE12Q5GAN4 147 aaKnown RBP21.53■■□□□ 1.04
RHBDD3-203ENST00000413137 ETAA1Q9NY74 926 aa21.53■■□□□ 1.04
RHBDD3-203ENST00000413137 SLC25A10Q9UBX3 287 aaPredicted RBP21.53■■□□□ 1.04
RHBDD3-203ENST00000413137 MIOXQ9UGB7 285 aa21.53■■□□□ 1.04
RHBDD3-203ENST00000413137 PCDHB10Q9UN67 800 aa21.53■■□□□ 1.04
RHBDD3-203ENST00000413137 PRRC2AP48634 2157 aaKnown RBP21.53■■□□□ 1.04
RHBDD3-203ENST00000413137 MEX3AA1L020 520 aaKnown RBP21.53■■□□□ 1.04
RHBDD3-203ENST00000413137 F5H0A9 414 aaPredicted RBP21.53■■□□□ 1.04
RHBDD3-203ENST00000413137 GLAP06280 429 aa21.53■■□□□ 1.04
RHBDD3-203ENST00000413137 GSTP1P09211 210 aaKnown RBP21.53■■□□□ 1.04
RHBDD3-203ENST00000413137 IL2RGP31785 369 aa21.53■■□□□ 1.04
RHBDD3-203ENST00000413137 LMO4P61968 165 aa21.53■■□□□ 1.04
RHBDD3-203ENST00000413137 EDDM3AQ14507 147 aa21.53■■□□□ 1.04
RHBDD3-203ENST00000413137 SERPINE3A8MV23 424 aa21.52■■□□□ 1.04
RHBDD3-203ENST00000413137 H3BUI4 141 aa21.52■■□□□ 1.04
RHBDD3-203ENST00000413137 NDUFB3O43676 98 aa21.52■■□□□ 1.04
RHBDD3-203ENST00000413137 GLIPR1P48060 266 aa21.52■■□□□ 1.04
RHBDD3-203ENST00000413137 RBM39Q14498 530 aaKnown RBP21.52■■□□□ 1.04
RHBDD3-203ENST00000413137 RSBN1Q5VWQ0 802 aaPredicted RBP21.52■■□□□ 1.04
RHBDD3-203ENST00000413137 PYHIN1Q6K0P9 492 aa21.52■■□□□ 1.04
RHBDD3-203ENST00000413137 FAM234AQ9H0X4 552 aa21.52■■□□□ 1.04
RHBDD3-203ENST00000413137 MED13LQ71F56 2210 aa21.51■■□□□ 1.03
RHBDD3-203ENST00000413137 TRAV39A0A0B4J263 110 aa21.51■■□□□ 1.03
RHBDD3-203ENST00000413137 MEIS3P1A6NDR6 274 aa21.51■■□□□ 1.03
RHBDD3-203ENST00000413137 IGHV2-5P01817 119 aa21.51■■□□□ 1.03
RHBDD3-203ENST00000413137 NDUFB7P17568 137 aa21.51■■□□□ 1.03
RHBDD3-203ENST00000413137 DGCR2P98153 550 aa21.51■■□□□ 1.03
RHBDD3-203ENST00000413137 ARFRP1Q13795 201 aa21.51■■□□□ 1.03
RHBDD3-203ENST00000413137 SHEQ5VZ18 495 aa21.51■■□□□ 1.03
RHBDD3-203ENST00000413137 BAIAP2L2Q6UXY1 529 aa21.51■■□□□ 1.03
RHBDD3-203ENST00000413137 NEIL1Q96FI4 390 aaPredicted RBP21.51■■□□□ 1.03
RHBDD3-203ENST00000413137 SDHCQ99643 169 aaPredicted RBP21.51■■□□□ 1.03
RHBDD3-203ENST00000413137 SRRQ9GZT4 340 aa21.51■■□□□ 1.03
RHBDD3-203ENST00000413137 MGST3O14880 152 aa21.5■■□□□ 1.03
RHBDD3-203ENST00000413137 CSN2P05814 226 aa21.5■■□□□ 1.03
RHBDD3-203ENST00000413137 FCER2P06734 321 aa21.5■■□□□ 1.03
RHBDD3-203ENST00000413137 PYDC2Q56P42 97 aa21.5■■□□□ 1.03
RHBDD3-203ENST00000413137 KRBOX4Q5JUW0 171 aa21.5■■□□□ 1.03
RHBDD3-203ENST00000413137 PRSS57Q6UWY2 283 aa21.5■■□□□ 1.03
RHBDD3-203ENST00000413137 ZNF497Q6ZNH5 498 aa21.5■■□□□ 1.03
RHBDD3-203ENST00000413137 OR8B3Q8NGG8 313 aa21.5■■□□□ 1.03
RHBDD3-203ENST00000413137 OR8B2Q96RD0 313 aa21.5■■□□□ 1.03
RHBDD3-203ENST00000413137 CMSS1Q9BQ75 279 aaKnown RBP21.5■■□□□ 1.03
RHBDD3-203ENST00000413137 DCTN5Q9BTE1 182 aa21.5■■□□□ 1.03
RHBDD3-203ENST00000413137 ZNF230Q9UIE0 474 aaPredicted RBP21.5■■□□□ 1.03
RHBDD3-203ENST00000413137 MALRD1Q5VYJ5 2156 aa21.5■■□□□ 1.03
RHBDD3-203ENST00000413137 A0A096LNT2 108 aa21.49■■□□□ 1.03
RHBDD3-203ENST00000413137 PHF1O43189 567 aaPredicted RBP21.49■■□□□ 1.03
RHBDD3-203ENST00000413137 PRSS3P35030 304 aa21.49■■□□□ 1.03
RHBDD3-203ENST00000413137 GNG2P59768 71 aa21.49■■□□□ 1.03
RHBDD3-203ENST00000413137 ZNF45Q02386 682 aa21.49■■□□□ 1.03
RHBDD3-203ENST00000413137 PNLIPRP3Q17RR3 467 aa21.49■■□□□ 1.03
RHBDD3-203ENST00000413137 LRRC10Q5BKY1 277 aa21.49■■□□□ 1.03
RHBDD3-203ENST00000413137 C5orf24Q7Z6I8 188 aa21.49■■□□□ 1.03
RHBDD3-203ENST00000413137 OR5D13Q8NGL4 314 aa21.49■■□□□ 1.03
RHBDD3-203ENST00000413137 OR4K15Q8NH41 348 aa21.49■■□□□ 1.03
RHBDD3-203ENST00000413137 OR52I2Q8NH67 350 aa21.49■■□□□ 1.03
RHBDD3-203ENST00000413137 MRPL30Q8TCC3 161 aaKnown RBP21.49■■□□□ 1.03
RHBDD3-203ENST00000413137 CCDC107Q8WV48 283 aa21.49■■□□□ 1.03
RHBDD3-203ENST00000413137 Q96MF0 132 aa21.49■■□□□ 1.03
RHBDD3-203ENST00000413137 TSC22D3Q99576 134 aa21.49■■□□□ 1.03
RHBDD3-203ENST00000413137 FOXC2Q99958 501 aa21.49■■□□□ 1.03
RHBDD3-203ENST00000413137 KIF25Q9UIL4 384 aa21.49■■□□□ 1.03
RHBDD3-203ENST00000413137 TPPPO94811 219 aa21.48■■□□□ 1.03
RHBDD3-203ENST00000413137 NAPSAO96009 420 aa21.48■■□□□ 1.03
RHBDD3-203ENST00000413137 MT-ND4P03905 459 aa21.48■■□□□ 1.03
RHBDD3-203ENST00000413137 EDDM3BP56851 147 aa21.48■■□□□ 1.03
RHBDD3-203ENST00000413137 WDR25Q64LD2 544 aaPredicted RBP21.48■■□□□ 1.03
RHBDD3-203ENST00000413137 GDPD3Q7L5L3 318 aa21.48■■□□□ 1.03
RHBDD3-203ENST00000413137 NLRC3Q7RTR2 1065 aa21.48■■□□□ 1.03
RHBDD3-203ENST00000413137 GAPTQ8N292 157 aa21.48■■□□□ 1.03
RHBDD3-203ENST00000413137 WFDC11Q8NEX6 87 aa21.48■■□□□ 1.03
RHBDD3-203ENST00000413137 PPP1R35Q8TAP8 253 aa21.48■■□□□ 1.03
RHBDD3-203ENST00000413137 MAFIPQ8WZ33 124 aa21.48■■□□□ 1.03
RHBDD3-203ENST00000413137 CD3GP09693 182 aa21.48■■□□□ 1.03
RHBDD3-203ENST00000413137 SLC25A16P16260 332 aa21.48■■□□□ 1.03
RHBDD3-203ENST00000413137 KCNJ3P48549 501 aa21.48■■□□□ 1.03
RHBDD3-203ENST00000413137 ARL6IP1Q15041 203 aa21.48■■□□□ 1.03
RHBDD3-203ENST00000413137 TRAPPC6BQ86SZ2 158 aa21.48■■□□□ 1.03
RHBDD3-203ENST00000413137 GVQW1Q8N7I0 195 aa21.48■■□□□ 1.03
RHBDD3-203ENST00000413137 GPX8Q8TED1 209 aa21.48■■□□□ 1.03
RHBDD3-203ENST00000413137 S100ZQ8WXG8 99 aa21.48■■□□□ 1.03
RHBDD3-203ENST00000413137 C19orf12Q9NSK7 152 aa21.48■■□□□ 1.03
RHBDD3-203ENST00000413137 J3QRK9 145 aa21.47■■□□□ 1.03
RHBDD3-203ENST00000413137 LANCL1O43813 399 aa21.47■■□□□ 1.03
RHBDD3-203ENST00000413137 ZFP36P26651 326 aaKnown RBP21.47■■□□□ 1.03
RHBDD3-203ENST00000413137 P2RX3P56373 397 aa21.47■■□□□ 1.03
RHBDD3-203ENST00000413137 PITPNAQ00169 270 aa21.47■■□□□ 1.03
RHBDD3-203ENST00000413137 DOCK11Q5JSL3 2073 aa21.47■■□□□ 1.03
RHBDD3-203ENST00000413137 SLC35E4Q6ICL7 350 aa21.47■■□□□ 1.03
RHBDD3-203ENST00000413137 H1FXQ92522 213 aaKnown RBP21.47■■□□□ 1.03
RHBDD3-203ENST00000413137 C12orf4Q9NQ89 552 aa21.47■■□□□ 1.03
RHBDD3-203ENST00000413137 KLK11Q9UBX7 282 aa21.47■■□□□ 1.03
RHBDD3-203ENST00000413137 CLN8Q9UBY8 286 aa21.47■■□□□ 1.03
RHBDD3-203ENST00000413137 MEIKINA0A087WXM9 373 aa21.46■■□□□ 1.03
RHBDD3-203ENST00000413137 CTDSPLO15194 276 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms