RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 RAB9BQ9NP90 201 aa9.72□□□□□ -0.85
PTPRF-204ENST00000412568 VSIG4Q9Y279 399 aa9.72□□□□□ -0.85
PTPRF-204ENST00000412568 DNPH1O43598 174 aa9.72□□□□□ -0.85
PTPRF-204ENST00000412568 CD59P13987 128 aa9.72□□□□□ -0.85
PTPRF-204ENST00000412568 CXCL2P19875 107 aa9.72□□□□□ -0.85
PTPRF-204ENST00000412568 GNG10P50151 68 aa9.72□□□□□ -0.85
PTPRF-204ENST00000412568 LCN15Q6UWW0 184 aa9.72□□□□□ -0.85
PTPRF-204ENST00000412568 ASB13Q8WXK3 278 aa9.72□□□□□ -0.85
PTPRF-204ENST00000412568 CLDN16Q9Y5I7 305 aa9.72□□□□□ -0.85
PTPRF-204ENST00000412568 PIEZO1Q92508 2521 aa9.72□□□□□ -0.85
PTPRF-204ENST00000412568 SPINK9Q5DT21 86 aa9.72□□□□□ -0.85
PTPRF-204ENST00000412568 PHYHD1Q5SRE7 291 aa9.72□□□□□ -0.85
PTPRF-204ENST00000412568 FAM214BQ7L5A3 538 aa9.72□□□□□ -0.85
PTPRF-204ENST00000412568 C1QL2Q7Z5L3 287 aa9.72□□□□□ -0.85
PTPRF-204ENST00000412568 SLC25A42Q86VD7 318 aa9.72□□□□□ -0.85
PTPRF-204ENST00000412568 TAAR3PQ9P1P4 343 aa9.72□□□□□ -0.85
PTPRF-204ENST00000412568 NCOR2Q9Y618 2525 aa9.72□□□□□ -0.85
PTPRF-204ENST00000412568 A0A1W2PNV4 684 aa9.71□□□□□ -0.85
PTPRF-204ENST00000412568 NKX6-3A6NJ46 265 aa9.71□□□□□ -0.85
PTPRF-204ENST00000412568 A8MXE2 369 aa9.71□□□□□ -0.85
PTPRF-204ENST00000412568 E5RGE8 158 aa9.71□□□□□ -0.85
PTPRF-204ENST00000412568 HEXAP06865 529 aa9.71□□□□□ -0.85
PTPRF-204ENST00000412568 FSTP19883 344 aa9.71□□□□□ -0.85
PTPRF-204ENST00000412568 AADACP22760 399 aa9.71□□□□□ -0.85
PTPRF-204ENST00000412568 PLAURQ03405 335 aa9.71□□□□□ -0.85
PTPRF-204ENST00000412568 TLE1Q04724 770 aa9.71□□□□□ -0.85
PTPRF-204ENST00000412568 RPUSD3Q6P087 351 aaKnown RBP9.71□□□□□ -0.85
PTPRF-204ENST00000412568 CBLN2Q8IUK8 224 aa9.71□□□□□ -0.85
PTPRF-204ENST00000412568 GNG13Q9P2W3 67 aa9.71□□□□□ -0.85
PTPRF-204ENST00000412568 PSG11Q9UQ72 335 aa9.71□□□□□ -0.85
PTPRF-204ENST00000412568 NSG2Q9Y328 171 aa9.71□□□□□ -0.85
PTPRF-204ENST00000412568 PINLYPA6NC86 204 aa9.71□□□□□ -0.85
PTPRF-204ENST00000412568 NTN3O00634 580 aaPredicted RBP9.71□□□□□ -0.85
PTPRF-204ENST00000412568 TAAR5O14804 337 aa9.71□□□□□ -0.85
PTPRF-204ENST00000412568 MT-ND4LP03901 98 aa9.71□□□□□ -0.85
PTPRF-204ENST00000412568 SRSF6Q13247 344 aaKnown RBP9.71□□□□□ -0.85
PTPRF-204ENST00000412568 GPR137Q96N19 417 aa9.71□□□□□ -0.85
PTPRF-204ENST00000412568 C5orf42Q9H799 3197 aa9.71□□□□□ -0.85
PTPRF-204ENST00000412568 DENND4CQ5VZ89 1909 aa9.71□□□□□ -0.86
PTPRF-204ENST00000412568 RNASEK-C17orf49H0YIS7 233 aa9.71□□□□□ -0.86
PTPRF-204ENST00000412568 GALR2O43603 387 aaPredicted RBP9.71□□□□□ -0.86
PTPRF-204ENST00000412568 SOX15O60248 233 aa9.71□□□□□ -0.86
PTPRF-204ENST00000412568 NPIPB7O75200 414 aa9.71□□□□□ -0.86
PTPRF-204ENST00000412568 FABP1P07148 127 aa9.71□□□□□ -0.86
PTPRF-204ENST00000412568 ARL3P36405 182 aa9.71□□□□□ -0.86
PTPRF-204ENST00000412568 FABP9Q0Z7S8 132 aa9.71□□□□□ -0.86
PTPRF-204ENST00000412568 RAB31Q13636 194 aa9.71□□□□□ -0.86
PTPRF-204ENST00000412568 KCNIP4Q6PIL6 250 aa9.71□□□□□ -0.86
PTPRF-204ENST00000412568 BHLHA15Q7RTS1 189 aaPredicted RBP9.71□□□□□ -0.86
PTPRF-204ENST00000412568 ZNF441Q8N8Z8 693 aa9.71□□□□□ -0.86
PTPRF-204ENST00000412568 RXFP4Q8TDU9 374 aa9.71□□□□□ -0.86
PTPRF-204ENST00000412568 TECTBQ96PL2 329 aa9.71□□□□□ -0.86
PTPRF-204ENST00000412568 PRRX2Q99811 253 aa9.71□□□□□ -0.86
PTPRF-204ENST00000412568 SOSTQ9BQB4 213 aa9.71□□□□□ -0.86
PTPRF-204ENST00000412568 RIMS4Q9H426 269 aaPredicted RBP9.71□□□□□ -0.86
PTPRF-204ENST00000412568 RAB18Q9NP72 206 aa9.71□□□□□ -0.86
PTPRF-204ENST00000412568 GPR27Q9NS67 375 aa9.71□□□□□ -0.86
PTPRF-204ENST00000412568 A0A0C4DFX4 3053 aa9.71□□□□□ -0.86
PTPRF-204ENST00000412568 CLPSP04118 112 aa9.71□□□□□ -0.86
PTPRF-204ENST00000412568 HOXA6P31267 233 aa9.71□□□□□ -0.86
PTPRF-204ENST00000412568 KLF3P57682 345 aaPredicted RBP9.71□□□□□ -0.86
PTPRF-204ENST00000412568 CSRP2Q16527 193 aa9.71□□□□□ -0.86
PTPRF-204ENST00000412568 RBMS3Q6XE24 437 aaKnown RBP9.71□□□□□ -0.86
PTPRF-204ENST00000412568 NECAP1Q8NC96 275 aa9.71□□□□□ -0.86
PTPRF-204ENST00000412568 CA5BP1Q8WTZ4 195 aa9.71□□□□□ -0.86
PTPRF-204ENST00000412568 PLEKHA2Q9HB19 425 aa9.71□□□□□ -0.86
PTPRF-204ENST00000412568 H7BYZ3 331 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 SYNGR1O43759 233 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 CRHP06850 196 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 CYC1P08574 325 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 HBG1P69891 147 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 HBG2P69892 147 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 ZNF260Q3ZCT1 412 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 TEX30Q5JUR7 227 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 C1orf100Q5SVJ3 147 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 GGNBP1Q5YKI7 109 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 LFNGQ8NES3 379 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 LHFPL5Q8TAF8 219 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 GMPPAQ96IJ6 420 aaPredicted RBP9.7□□□□□ -0.86
PTPRF-204ENST00000412568 WNT5BQ9H1J7 359 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 LIPGQ9Y5X9 500 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 IGHV3OR15-7A0A075B7D8 119 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 LINC00862A6NCI5 91 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 NUDT19A8MXV4 375 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 PPP5D1E7EU14 171 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 M0R1X1 148 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 SIGLEC5O15389 551 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 OPN1MWP04001 364 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 OPN1MW2P0DN77 364 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 OPN1MW3P0DN78 364 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 NPBWR2P48146 333 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 RAB13P51153 203 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 CCL8P80075 99 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 MOGAT3Q86VF5 341 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 FAM24BQ8N5W8 94 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 ZNF703Q9H7S9 590 aaPredicted RBP9.7□□□□□ -0.86
PTPRF-204ENST00000412568 LRP5LA4QPB2 252 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 ISG15P05161 165 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 H2BFSP57053 126 aa9.7□□□□□ -0.86
PTPRF-204ENST00000412568 TNFAIP6P98066 277 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms